RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 GH2P01242 217 aa11.44□□□□□ -0.58
BRCA1-226ENST00000591534 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-226ENST00000591534 CERKLQ49MI3 558 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-226ENST00000591534 MAP3K21Q5TCX8 1036 aa11.44□□□□□ -0.58
BRCA1-226ENST00000591534 MFSD14CQ5VZR4 134 aa11.44□□□□□ -0.58
BRCA1-226ENST00000591534 TRIB2Q92519 343 aa11.44□□□□□ -0.58
BRCA1-226ENST00000591534 APBA2Q99767 749 aa11.44□□□□□ -0.58
BRCA1-226ENST00000591534 PAGR1Q9BTK6 254 aa11.44□□□□□ -0.58
BRCA1-226ENST00000591534 RBPJLQ9UBG7 517 aa11.44□□□□□ -0.58
BRCA1-226ENST00000591534 IVNS1ABPQ9Y6Y0 642 aa11.44□□□□□ -0.58
BRCA1-226ENST00000591534 MSCO60682 206 aa11.43□□□□□ -0.58
BRCA1-226ENST00000591534 RAB3GAP1Q15042 981 aa11.43□□□□□ -0.58
BRCA1-226ENST00000591534 ABCB5Q2M3G0 1257 aa11.43□□□□□ -0.58
BRCA1-226ENST00000591534 TATDN1Q6P1N9 297 aa11.43□□□□□ -0.58
BRCA1-226ENST00000591534 GPR142Q7Z601 462 aa11.43□□□□□ -0.58
BRCA1-226ENST00000591534 ADGRA1Q86SQ6 560 aa11.43□□□□□ -0.58
BRCA1-226ENST00000591534 MAGEB6Q8N7X4 407 aa11.43□□□□□ -0.58
BRCA1-226ENST00000591534 DIS3LQ8TF46 1054 aaKnown RBP11.43□□□□□ -0.58
BRCA1-226ENST00000591534 C12orf42Q96LP6 360 aa11.43□□□□□ -0.58
BRCA1-226ENST00000591534 CCDC8Q9H0W5 538 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-226ENST00000591534 DNAJC18Q9H819 358 aa11.43□□□□□ -0.58
BRCA1-226ENST00000591534 PIH1D3Q9NQM4 214 aaKnown RBP11.43□□□□□ -0.58
BRCA1-226ENST00000591534 LIMD1Q9UGP4 676 aa11.43□□□□□ -0.58
BRCA1-226ENST00000591534 DBNLQ9UJU6 430 aaKnown RBP11.43□□□□□ -0.58
BRCA1-226ENST00000591534 RANBP2P49792 3224 aaKnown RBP11.43□□□□□ -0.58
BRCA1-226ENST00000591534 MGAMO43451 1857 aa11.42□□□□□ -0.58
BRCA1-226ENST00000591534 TRIOBPQ9H2D6 2365 aa11.42□□□□□ -0.58
BRCA1-226ENST00000591534 POLR3DP05423 398 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-226ENST00000591534 CLK2P49760 499 aaKnown RBP11.42□□□□□ -0.58
BRCA1-226ENST00000591534 MORN1Q5T089 497 aa11.42□□□□□ -0.58
BRCA1-226ENST00000591534 WDR78Q5VTH9 848 aa11.42□□□□□ -0.58
BRCA1-226ENST00000591534 MIGA1Q8NAN2 632 aa11.42□□□□□ -0.58
BRCA1-226ENST00000591534 SLC17A8Q8NDX2 589 aa11.42□□□□□ -0.58
BRCA1-226ENST00000591534 EDC3Q96F86 508 aaKnown RBP11.42□□□□□ -0.58
BRCA1-226ENST00000591534 GDF15Q99988 308 aa11.42□□□□□ -0.58
BRCA1-226ENST00000591534 KIAA1683Q9H0B3 1180 aa11.42□□□□□ -0.58
BRCA1-226ENST00000591534 C1orf115Q9H7X2 142 aa11.42□□□□□ -0.58
BRCA1-226ENST00000591534 TXNRD2Q9NNW7 524 aa11.42□□□□□ -0.58
BRCA1-226ENST00000591534 SLC15A5A6NIM6 579 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 DYNLL1P63167 89 aaKnown RBP11.41□□□□□ -0.58
BRCA1-226ENST00000591534 ATP2B2Q01814 1243 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 CACNB2Q08289 660 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-226ENST00000591534 TRIM32Q13049 653 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 ZYXQ15942 572 aaKnown RBP11.41□□□□□ -0.58
BRCA1-226ENST00000591534 ERICH6BQ5W0A0 696 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 CATSPERGQ6ZRH7 1159 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 AACSQ86V21 672 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 RDH13Q8NBN7 331 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 USP6NLQ92738 828 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 EAF2Q96CJ1 260 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-226ENST00000591534 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.41□□□□□ -0.58
BRCA1-226ENST00000591534 CRNKL1Q9BZJ0 848 aaKnown RBP11.41□□□□□ -0.58
BRCA1-226ENST00000591534 UBE2OQ9C0C9 1292 aaKnown RBP11.41□□□□□ -0.58
BRCA1-226ENST00000591534 SLC5A4Q9NY91 659 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 HOXC10Q9NYD6 342 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 ZMYND8Q9ULU4 1186 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-226ENST00000591534 LOC285556D6RIA3 1793 aa11.41□□□□□ -0.58
BRCA1-226ENST00000591534 PHIPQ8WWQ0 1821 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 MAGEB6P1A0A0J9YX57 407 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 NDUFV2P19404 249 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 JAG1P78504 1218 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 Q3C1V9 767 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 LRIT3Q3SXY7 679 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 SWT1Q5T5J6 900 aaKnown RBP11.4□□□□□ -0.58
BRCA1-226ENST00000591534 LBX2Q6XYB7 198 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 AMOTL1Q8IY63 956 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 TDHQ8IZJ6 230 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 CLASRPQ8N2M8 674 aaKnown RBP11.4□□□□□ -0.58
BRCA1-226ENST00000591534 PANK1Q8TE04 598 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 PORCNQ9H237 461 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 CHMP4BQ9H444 224 aaKnown RBP11.4□□□□□ -0.58
BRCA1-226ENST00000591534 PRKAG2Q9UGJ0 569 aa11.4□□□□□ -0.58
BRCA1-226ENST00000591534 SZT2Q5T011 3432 aa11.4□□□□□ -0.59
BRCA1-226ENST00000591534 PTPRFP10586 1907 aa11.39□□□□□ -0.59
BRCA1-226ENST00000591534 MPHOSPH10O00566 681 aaKnown RBP11.39□□□□□ -0.59
BRCA1-226ENST00000591534 STRNO43815 780 aa11.39□□□□□ -0.59
BRCA1-226ENST00000591534 HMMRO75330 724 aa11.39□□□□□ -0.59
BRCA1-226ENST00000591534 VCAM1P19320 739 aa11.39□□□□□ -0.59
BRCA1-226ENST00000591534 MAGEA10P43363 369 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-226ENST00000591534 SLC9C2Q5TAH2 1124 aa11.39□□□□□ -0.59
BRCA1-226ENST00000591534 LBHD1Q9BQE6 289 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-226ENST00000591534 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
BRCA1-226ENST00000591534 TLR7Q9NYK1 1049 aaKnown RBP11.39□□□□□ -0.59
BRCA1-226ENST00000591534 RABGEF1Q9UJ41 708 aa11.39□□□□□ -0.59
BRCA1-226ENST00000591534 MOXD2PA6NHM9 499 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 HOXC6P09630 235 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 IFIT2P09913 472 aaKnown RBP11.38□□□□□ -0.59
BRCA1-226ENST00000591534 COL6A1P12109 1028 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 SYN1P17600 705 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 CNGA1P29973 690 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 COG2Q14746 738 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 CSPP1Q1MSJ5 1256 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 CEP85Q6P2H3 762 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 DPP9Q86TI2 863 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 MB21D1Q8N884 522 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 ARRDC4Q8NCT1 418 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.38□□□□□ -0.59
BRCA1-226ENST00000591534 LPAR1Q92633 364 aa11.38□□□□□ -0.59
BRCA1-226ENST00000591534 RPAP3Q9H6T3 665 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-226ENST00000591534 MCM9Q9NXL9 1143 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms