RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PTH1RQ03431 593 aa21.61■■□□□ 1.05
DDX39A-212ENST00000590260 GMCL1P1Q8NEA9 526 aa21.61■■□□□ 1.05
DDX39A-212ENST00000590260 PXYLP1Q8TE99 480 aa21.61■■□□□ 1.05
DDX39A-212ENST00000590260 TSPY2A6NKD2 308 aa21.6■■□□□ 1.05
DDX39A-212ENST00000590260 RANBP6O60518 1105 aaKnown RBP21.6■■□□□ 1.05
DDX39A-212ENST00000590260 TRIM32Q13049 653 aa21.6■■□□□ 1.05
DDX39A-212ENST00000590260 TMEM132BQ14DG7 1078 aa21.6■■□□□ 1.05
DDX39A-212ENST00000590260 AKNAD1Q5T1N1 836 aa21.6■■□□□ 1.05
DDX39A-212ENST00000590260 NBPF11Q86T75 865 aa21.6■■□□□ 1.05
DDX39A-212ENST00000590260 SLAIN1Q8ND83 568 aa21.6■■□□□ 1.05
DDX39A-212ENST00000590260 PPP1R9AQ9ULJ8 1098 aa21.6■■□□□ 1.05
DDX39A-212ENST00000590260 SYNPO2Q9UMS6 1093 aa21.6■■□□□ 1.05
DDX39A-212ENST00000590260 RAD50Q92878 1312 aa21.59■■□□□ 1.05
DDX39A-212ENST00000590260 SGSM2O43147 1006 aa21.59■■□□□ 1.05
DDX39A-212ENST00000590260 RAD21O60216 631 aa21.59■■□□□ 1.05
DDX39A-212ENST00000590260 EN2P19622 333 aaPredicted RBP21.59■■□□□ 1.05
DDX39A-212ENST00000590260 RRP12Q5JTH9 1297 aaKnown RBP21.59■■□□□ 1.05
DDX39A-212ENST00000590260 RCSD1Q6JBY9 416 aa21.59■■□□□ 1.05
DDX39A-212ENST00000590260 PLEKHH3Q7Z736 793 aa21.59■■□□□ 1.05
DDX39A-212ENST00000590260 SPATC1LQ9H0A9 340 aa21.59■■□□□ 1.05
DDX39A-212ENST00000590260 ZNF236Q9UL36 1845 aa21.59■■□□□ 1.05
DDX39A-212ENST00000590260 SAMD1Q6SPF0 538 aaPredicted RBP21.58■■□□□ 1.05
DDX39A-212ENST00000590260 TRIB2Q92519 343 aa21.58■■□□□ 1.05
DDX39A-212ENST00000590260 ZNF214Q9UL59 606 aaPredicted RBP21.58■■□□□ 1.05
DDX39A-212ENST00000590260 TAF6LQ9Y6J9 622 aa21.58■■□□□ 1.05
DDX39A-212ENST00000590260 VWA5AO00534 786 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 ZNF213O14771 459 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 INHAP05111 366 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 CYP2B6P20813 491 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 PTPREP23469 700 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 CCL14Q16627 93 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 SLFN13Q68D06 897 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 SHISA4Q96DD7 197 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 UNC93B1Q9H1C4 597 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 TCP11L1Q9NUJ3 509 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 STX8Q9UNK0 236 aa21.57■■□□□ 1.04
DDX39A-212ENST00000590260 CCL5P13501 91 aa21.56■■□□□ 1.04
DDX39A-212ENST00000590260 ERCC3P19447 782 aa21.56■■□□□ 1.04
DDX39A-212ENST00000590260 GRB14Q14449 540 aa21.56■■□□□ 1.04
DDX39A-212ENST00000590260 MFSD6Q6ZSS7 791 aa21.56■■□□□ 1.04
DDX39A-212ENST00000590260 MB21D1Q8N884 522 aa21.56■■□□□ 1.04
DDX39A-212ENST00000590260 CHMP4CQ96CF2 233 aa21.56■■□□□ 1.04
DDX39A-212ENST00000590260 NUDT12Q9BQG2 462 aa21.56■■□□□ 1.04
DDX39A-212ENST00000590260 SLF1Q9BQI6 1058 aa21.56■■□□□ 1.04
DDX39A-212ENST00000590260 TOMM22Q9NS69 142 aa21.56■■□□□ 1.04
DDX39A-212ENST00000590260 IGHA2P01877 340 aa21.55■■□□□ 1.04
DDX39A-212ENST00000590260 CCNA1P78396 465 aa21.55■■□□□ 1.04
DDX39A-212ENST00000590260 MLLT1Q03111 559 aaPredicted RBP21.55■■□□□ 1.04
DDX39A-212ENST00000590260 SHCBP1Q8NEM2 672 aa21.55■■□□□ 1.04
DDX39A-212ENST00000590260 SOCS4Q8WXH5 440 aa21.55■■□□□ 1.04
DDX39A-212ENST00000590260 GMCL1Q96IK5 515 aa21.55■■□□□ 1.04
DDX39A-212ENST00000590260 TMEM47Q9BQJ4 181 aa21.55■■□□□ 1.04
DDX39A-212ENST00000590260 FLRT1Q9NZU1 646 aa21.55■■□□□ 1.04
DDX39A-212ENST00000590260 MKI67P46013 3256 aaKnown RBP21.54■■□□□ 1.04
DDX39A-212ENST00000590260 PCP11498 1178 aaKnown RBP21.54■■□□□ 1.04
DDX39A-212ENST00000590260 XRCC5P13010 732 aaKnown RBP21.54■■□□□ 1.04
DDX39A-212ENST00000590260 MAP2K5Q13163 448 aa21.54■■□□□ 1.04
DDX39A-212ENST00000590260 NPLOC4Q8TAT6 608 aa21.54■■□□□ 1.04
DDX39A-212ENST00000590260 CCDC136Q96JN2 1154 aa21.54■■□□□ 1.04
DDX39A-212ENST00000590260 ZKSCAN3Q9BRR0 538 aa21.54■■□□□ 1.04
DDX39A-212ENST00000590260 SLC15A5A6NIM6 579 aa21.53■■□□□ 1.04
DDX39A-212ENST00000590260 BMP3P12645 472 aa21.53■■□□□ 1.04
DDX39A-212ENST00000590260 MCCP23508 829 aa21.53■■□□□ 1.04
DDX39A-212ENST00000590260 PLS1Q14651 629 aa21.53■■□□□ 1.04
DDX39A-212ENST00000590260 BMP2KLQ5H9B9 411 aa21.53■■□□□ 1.04
DDX39A-212ENST00000590260 MAP3K21Q5TCX8 1036 aa21.53■■□□□ 1.04
DDX39A-212ENST00000590260 WDR78Q5VTH9 848 aa21.53■■□□□ 1.04
DDX39A-212ENST00000590260 RIOX2Q8IUF8 465 aa21.53■■□□□ 1.04
DDX39A-212ENST00000590260 BIN2Q9UBW5 565 aaPredicted RBP21.53■■□□□ 1.04
DDX39A-212ENST00000590260 RIPK3Q9Y572 518 aa21.53■■□□□ 1.04
DDX39A-212ENST00000590260 B4E1Z4 1266 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 COBLO75128 1261 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 KDM4AO75164 1064 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 HMGCRP04035 888 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 CYP21A2P08686 494 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 RGS2P41220 211 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 UBXN2AP68543 259 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 KCTD1Q719H9 257 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 PRPF38AQ8NAV1 312 aaKnown RBP21.52■■□□□ 1.04
DDX39A-212ENST00000590260 RUFY2Q8WXA3 655 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 APBA2Q99767 749 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 TMEM106CQ9BVX2 250 aa21.52■■□□□ 1.04
DDX39A-212ENST00000590260 RNF41Q9H4P4 317 aaPredicted RBP21.52■■□□□ 1.04
DDX39A-212ENST00000590260 PAK6Q9NQU5 681 aaPredicted RBP21.52■■□□□ 1.04
DDX39A-212ENST00000590260 KIAA0100Q14667 2235 aaKnown RBP21.52■■□□□ 1.04
DDX39A-212ENST00000590260 TMEM232C9JQI7 657 aa21.51■■□□□ 1.03
DDX39A-212ENST00000590260 HOXC6P09630 235 aa21.51■■□□□ 1.03
DDX39A-212ENST00000590260 IMMTQ16891 758 aaKnown RBP21.51■■□□□ 1.03
DDX39A-212ENST00000590260 NCAPG2Q86XI2 1143 aa21.51■■□□□ 1.03
DDX39A-212ENST00000590260 CCAR1Q8IX12 1150 aaKnown RBP21.51■■□□□ 1.03
DDX39A-212ENST00000590260 MAP4K1Q92918 833 aa21.51■■□□□ 1.03
DDX39A-212ENST00000590260 KIFC2Q96AC6 838 aa21.51■■□□□ 1.03
DDX39A-212ENST00000590260 RNF208Q9H0X6 261 aa21.51■■□□□ 1.03
DDX39A-212ENST00000590260 SLC38A10Q9HBR0 1119 aa21.51■■□□□ 1.03
DDX39A-212ENST00000590260 ZSWIM5Q9P217 1185 aa21.51■■□□□ 1.03
DDX39A-212ENST00000590260 CTNNA3Q9UI47 895 aa21.51■■□□□ 1.03
DDX39A-212ENST00000590260 FEM1BQ9UK73 627 aa21.51■■□□□ 1.03
DDX39A-212ENST00000590260 ZNFX1Q9P2E3 1918 aaKnown RBP21.51■■□□□ 1.03
DDX39A-212ENST00000590260 GJB1P08034 283 aa21.5■■□□□ 1.03
DDX39A-212ENST00000590260 TOP1P11387 765 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms