RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 TMEM132BQ14DG7 1078 aa12.53□□□□□ -0.4
RETREG3-209ENST00000590035 SNX17Q15036 470 aa12.53□□□□□ -0.4
RETREG3-209ENST00000590035 GIMAP6Q6P9H5 292 aa12.53□□□□□ -0.4
RETREG3-209ENST00000590035 TANGO6Q9C0B7 1094 aa12.53□□□□□ -0.4
RETREG3-209ENST00000590035 MROH8Q9H579 483 aa12.53□□□□□ -0.4
RETREG3-209ENST00000590035 SH2D4AQ9H788 454 aa12.53□□□□□ -0.4
RETREG3-209ENST00000590035 ARHGEF10LQ9HCE6 1279 aa12.53□□□□□ -0.4
RETREG3-209ENST00000590035 IGKV6D-41A0A0C4DH26 115 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 GSG1L2A8MUP6 293 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 DNM1LO00429 736 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 FLOT1O75955 427 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 EEF2P13639 858 aaKnown RBP12.52□□□□□ -0.41
RETREG3-209ENST00000590035 RASA1P20936 1047 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 TDHQ8IZJ6 230 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 SPICE1Q8N0Z3 855 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 KBTBD3Q8NAB2 608 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 OSBP2Q969R2 916 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 KANSL2Q9H9L4 492 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 ECHDC1Q9NTX5 307 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
RETREG3-209ENST00000590035 ZNF214Q9UL59 606 aaPredicted RBP12.52□□□□□ -0.41
RETREG3-209ENST00000590035 PPP1R9AQ9ULJ8 1098 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.41
RETREG3-209ENST00000590035 UNC80Q8N2C7 3258 aa12.51□□□□□ -0.41
RETREG3-209ENST00000590035 PLXNA1Q9UIW2 1896 aa12.51□□□□□ -0.41
RETREG3-209ENST00000590035 SEPT4O43236 478 aa12.51□□□□□ -0.41
RETREG3-209ENST00000590035 SLC25A27O95847 323 aa12.51□□□□□ -0.41
RETREG3-209ENST00000590035 WDR78Q5VTH9 848 aa12.51□□□□□ -0.41
RETREG3-209ENST00000590035 ZSCAN25Q6NSZ9 544 aa12.51□□□□□ -0.41
RETREG3-209ENST00000590035 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.51□□□□□ -0.41
RETREG3-209ENST00000590035 RIOX2Q8IUF8 465 aa12.51□□□□□ -0.41
RETREG3-209ENST00000590035 MAML3Q96JK9 1138 aa12.51□□□□□ -0.41
RETREG3-209ENST00000590035 EPB41L4AQ9HCS5 686 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-209ENST00000590035 FBXO28Q9NVF7 368 aa12.51□□□□□ -0.41
RETREG3-209ENST00000590035 NRBP1Q9UHY1 535 aa12.51□□□□□ -0.41
RETREG3-209ENST00000590035 CDH23Q9H251 3354 aa12.5□□□□□ -0.41
RETREG3-209ENST00000590035 VWA5AO00534 786 aa12.5□□□□□ -0.41
RETREG3-209ENST00000590035 ZNF792Q3KQV3 632 aa12.5□□□□□ -0.41
RETREG3-209ENST00000590035 C1orf53Q5VUE5 145 aa12.5□□□□□ -0.41
RETREG3-209ENST00000590035 DPP9Q86TI2 863 aa12.5□□□□□ -0.41
RETREG3-209ENST00000590035 APPBP2Q92624 585 aa12.5□□□□□ -0.41
RETREG3-209ENST00000590035 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
RETREG3-209ENST00000590035 NYAP2Q9P242 653 aa12.5□□□□□ -0.41
RETREG3-209ENST00000590035 DIS3Q9Y2L1 958 aaKnown RBP12.5□□□□□ -0.41
RETREG3-209ENST00000590035 PLIN4Q96Q06 1357 aa12.5□□□□□ -0.41
RETREG3-209ENST00000590035 SENP6Q9GZR1 1112 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-209ENST00000590035 SALL3Q9BXA9 1300 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 ATP2A1O14983 1001 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 RNF113AO15541 343 aaKnown RBP12.48□□□□□ -0.41
RETREG3-209ENST00000590035 FCER1AP12319 257 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 LRRC41Q15345 812 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 FAM83BQ5T0W9 1011 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 GJC2Q5T442 439 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-209ENST00000590035 TSHZ3Q63HK5 1081 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 NCAPG2Q86XI2 1143 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 AMOTL1Q8IY63 956 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 ARRDC4Q8NCT1 418 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 PI4K2BQ8TCG2 481 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 MKL1Q969V6 931 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 UBE2OQ9C0C9 1292 aaKnown RBP12.48□□□□□ -0.41
RETREG3-209ENST00000590035 SYNPO2Q9UMS6 1093 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 MYH4Q9Y623 1939 aa12.48□□□□□ -0.41
RETREG3-209ENST00000590035 DNAJC25-GNG10A0A024R161 153 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 M0R2C6 588 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 FOXP2O15409 715 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 GPAA1O43292 621 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 NDUFB10O96000 172 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 ZFYP08048 801 aaPredicted RBP12.47□□□□□ -0.41
RETREG3-209ENST00000590035 ZNF865P0CJ78 1059 aaPredicted RBP12.47□□□□□ -0.41
RETREG3-209ENST00000590035 CNGA1P29973 690 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 COPB2P35606 906 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 STAT3P40763 770 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 RTP1P59025 263 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 FAM47AQ5JRC9 791 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 PRAMEF19Q5SWL8 479 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 SLC39A5Q6ZMH5 540 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 TINF2Q9BSI4 451 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 GOPCQ9HD26 462 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 MTMR10Q9NXD2 777 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 SLC5A4Q9NY91 659 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 PHF24Q9UPV7 400 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 PCDHB15Q9Y5E8 787 aa12.47□□□□□ -0.41
RETREG3-209ENST00000590035 SPTBN5Q9NRC6 3674 aaKnown RBP12.47□□□□□ -0.41
RETREG3-209ENST00000590035 TTC41PQ6P2S7 1318 aa12.46□□□□□ -0.41
RETREG3-209ENST00000590035 EYSQ5T1H1 3165 aa12.46□□□□□ -0.41
RETREG3-209ENST00000590035 F5H6K3 240 aa12.46□□□□□ -0.41
RETREG3-209ENST00000590035 POTEB2H3BUK9 544 aa12.46□□□□□ -0.41
RETREG3-209ENST00000590035 PGK2P07205 417 aa12.46□□□□□ -0.41
RETREG3-209ENST00000590035 TAL1P17542 331 aaPredicted RBP12.46□□□□□ -0.41
RETREG3-209ENST00000590035 ATN1P54259 1190 aaPredicted RBP12.46□□□□□ -0.41
RETREG3-209ENST00000590035 MDM2Q00987 491 aaPredicted RBP12.46□□□□□ -0.41
RETREG3-209ENST00000590035 KLRC3Q07444 240 aa12.46□□□□□ -0.41
RETREG3-209ENST00000590035 PLS1Q14651 629 aa12.46□□□□□ -0.41
RETREG3-209ENST00000590035 FAM109BQ6ICB4 259 aaPredicted RBP12.46□□□□□ -0.41
RETREG3-209ENST00000590035 MAMDC4Q6UXC1 1216 aa12.46□□□□□ -0.41
RETREG3-209ENST00000590035 Q7L0L9 218 aa12.46□□□□□ -0.41
RETREG3-209ENST00000590035 DEFB123Q8N688 67 aa12.46□□□□□ -0.41
RETREG3-209ENST00000590035 FGD4Q96M96 766 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms