RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 ADORA2AP29274 412 aa20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 B4GALNT3Q6L9W6 998 aa20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 AMOTL1Q8IY63 956 aa20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 LRRC47Q8N1G4 583 aaKnown RBP20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 CEP95Q96GE4 821 aa20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 CWC22Q9HCG8 908 aaKnown RBP20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 OGDHLQ9ULD0 1010 aa20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 ZNF236Q9UL36 1845 aa20.13■□□□□ 0.81
CROCCP3-203ENST00000589964 HOXC6P09630 235 aa20.13■□□□□ 0.81
CROCCP3-203ENST00000589964 CCNA1P78396 465 aa20.13■□□□□ 0.81
CROCCP3-203ENST00000589964 CTDSPL2Q05D32 466 aa20.13■□□□□ 0.81
CROCCP3-203ENST00000589964 ADAMTS5Q9UNA0 930 aa20.13■□□□□ 0.81
CROCCP3-203ENST00000589964 NMT2O60551 498 aa20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 FXR1P51114 621 aaKnown RBP eCLIP20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 PRAMEF19Q5SWL8 479 aa20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 ANO1Q5XXA6 986 aa20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 ZNF589Q86UQ0 364 aaPredicted RBP20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 SMC5Q8IY18 1101 aa20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 MKNK2Q9HBH9 465 aa20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 HOXC10Q9NYD6 342 aa20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 CLIP2Q9UDT6 1046 aa20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 ZNF214Q9UL59 606 aaPredicted RBP20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 PPP1R9AQ9ULJ8 1098 aa20.12■□□□□ 0.81
CROCCP3-203ENST00000589964 VWA5AO00534 786 aa20.11■□□□□ 0.81
CROCCP3-203ENST00000589964 PPARAQ07869 468 aa20.11■□□□□ 0.81
CROCCP3-203ENST00000589964 NCAPG2Q86XI2 1143 aa20.11■□□□□ 0.81
CROCCP3-203ENST00000589964 PRO3102Q9H379 93 aa20.11■□□□□ 0.81
CROCCP3-203ENST00000589964 NYAP2Q9P242 653 aa20.11■□□□□ 0.81
CROCCP3-203ENST00000589964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.11■□□□□ 0.81
CROCCP3-203ENST00000589964 MYH4Q9Y623 1939 aa20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 F5H6K3 240 aa20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 PGK2P07205 417 aa20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 GNAT2P19087 354 aa20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 IRX6P78412 446 aaPredicted RBP20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 KLRC3Q07444 240 aa20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 C7orf61Q8IZ16 206 aa20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 GCC1Q96CN9 775 aa20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 SH2D4AQ9H788 454 aa20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 MTMR4Q9NYA4 1195 aa20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 ZMYND8Q9ULU4 1186 aaPredicted RBP20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 RIPK3Q9Y572 518 aa20.1■□□□□ 0.81
CROCCP3-203ENST00000589964 CYBAP13498 195 aa20.09■□□□□ 0.81
CROCCP3-203ENST00000589964 TAL1P17542 331 aaPredicted RBP20.09■□□□□ 0.81
CROCCP3-203ENST00000589964 NMIQ13287 307 aaPredicted RBP20.09■□□□□ 0.81
CROCCP3-203ENST00000589964 SHCBP1Q8NEM2 672 aa20.09■□□□□ 0.81
CROCCP3-203ENST00000589964 HTATIP2Q9BUP3 242 aa20.09■□□□□ 0.81
CROCCP3-203ENST00000589964 NBPF3Q9H094 633 aa20.09■□□□□ 0.81
CROCCP3-203ENST00000589964 NAPBQ9H115 298 aa20.09■□□□□ 0.81
CROCCP3-203ENST00000589964 GOPCQ9HD26 462 aa20.09■□□□□ 0.81
CROCCP3-203ENST00000589964 IVNS1ABPQ9Y6Y0 642 aa20.09■□□□□ 0.81
CROCCP3-203ENST00000589964 PLIN4Q96Q06 1357 aa20.08■□□□□ 0.81
CROCCP3-203ENST00000589964 COL6A1P12109 1028 aa20.08■□□□□ 0.81
CROCCP3-203ENST00000589964 NECAB2Q7Z6G3 386 aa20.08■□□□□ 0.81
CROCCP3-203ENST00000589964 PLEKHM2Q8IWE5 1019 aa20.08■□□□□ 0.81
CROCCP3-203ENST00000589964 MB21D1Q8N884 522 aa20.08■□□□□ 0.81
CROCCP3-203ENST00000589964 IL17RBQ9NRM6 502 aa20.08■□□□□ 0.81
CROCCP3-203ENST00000589964 DNAH12Q6ZR08 3092 aa20.08■□□□□ 0.8
CROCCP3-203ENST00000589964 EVI5O60447 810 aa20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 SYN1P17600 705 aa20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 TFAP4Q01664 338 aa20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 LRRC26Q2I0M4 334 aa20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 MFSD14CQ5VZR4 134 aa20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 DPP9Q86TI2 863 aa20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 TRMT44Q8IYL2 757 aaKnown RBP20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 NEDD1Q8NHV4 660 aa20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 LENG1Q96BZ8 264 aaPredicted RBP20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 EVI5LQ96CN4 794 aa20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 C11orf49Q9H6J7 331 aa20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 SUPT16HQ9Y5B9 1047 aaKnown RBP20.07■□□□□ 0.8
CROCCP3-203ENST00000589964 SNAP25P60880 206 aa20.06■□□□□ 0.8
CROCCP3-203ENST00000589964 NUCB1Q02818 461 aa20.06■□□□□ 0.8
CROCCP3-203ENST00000589964 RIOX2Q8IUF8 465 aa20.06■□□□□ 0.8
CROCCP3-203ENST00000589964 ZNF444Q8N0Y2 327 aaPredicted RBP20.06■□□□□ 0.8
CROCCP3-203ENST00000589964 ANKLE1Q8NAG6 615 aa20.06■□□□□ 0.8
CROCCP3-203ENST00000589964 MAML3Q96JK9 1138 aa20.06■□□□□ 0.8
CROCCP3-203ENST00000589964 SLF1Q9BQI6 1058 aa20.06■□□□□ 0.8
CROCCP3-203ENST00000589964 DDX20Q9UHI6 824 aaKnown RBP20.06■□□□□ 0.8
CROCCP3-203ENST00000589964 ZNFX1Q9P2E3 1918 aaKnown RBP20.06■□□□□ 0.8
CROCCP3-203ENST00000589964 CNGA1P29973 690 aa20.05■□□□□ 0.8
CROCCP3-203ENST00000589964 STAT3P40763 770 aa20.05■□□□□ 0.8
CROCCP3-203ENST00000589964 CHD1LQ86WJ1 897 aa20.05■□□□□ 0.8
CROCCP3-203ENST00000589964 NACAP1Q9BZK3 213 aa20.05■□□□□ 0.8
CROCCP3-203ENST00000589964 MROH8Q9H579 483 aa20.05■□□□□ 0.8
CROCCP3-203ENST00000589964 SZT2Q5T011 3432 aa20.05■□□□□ 0.8
CROCCP3-203ENST00000589964 PDE4AP27815 886 aa20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 SLC4A3P48751 1232 aa20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 HAND2P61296 217 aa20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 OLFML2BQ68BL8 750 aa20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 MKL1Q969V6 931 aa20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 KIFC2Q96AC6 838 aa20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 FGD4Q96M96 766 aa20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 MMP19Q99542 508 aa20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 IL25Q9H293 177 aa20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 RAVER2Q9HCJ3 691 aaKnown RBP20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 DDX49Q9Y6V7 483 aaKnown RBP20.04■□□□□ 0.8
CROCCP3-203ENST00000589964 TTLL1O95922 423 aa20.03■□□□□ 0.8
CROCCP3-203ENST00000589964 FGAP02671 866 aa20.03■□□□□ 0.8
CROCCP3-203ENST00000589964 TSPY3P0CV98 308 aa20.03■□□□□ 0.8
CROCCP3-203ENST00000589964 TSPY8P0CW00 308 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms