RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 LRRC26Q2I0M4 334 aa21.58■■□□□ 1.05
H3F3B-209ENST00000589949 FAM83BQ5T0W9 1011 aa21.58■■□□□ 1.05
H3F3B-209ENST00000589949 DPP9Q86TI2 863 aa21.58■■□□□ 1.05
H3F3B-209ENST00000589949 NUP88Q99567 741 aaPredicted RBP21.58■■□□□ 1.05
H3F3B-209ENST00000589949 DDX20Q9UHI6 824 aaKnown RBP21.58■■□□□ 1.05
H3F3B-209ENST00000589949 SALL3Q9BXA9 1300 aa21.57■■□□□ 1.04
H3F3B-209ENST00000589949 COL11A1P12107 1806 aaPredicted RBP21.57■■□□□ 1.04
H3F3B-209ENST00000589949 OLFML2BQ68BL8 750 aa21.57■■□□□ 1.04
H3F3B-209ENST00000589949 NCAPG2Q86XI2 1143 aa21.57■■□□□ 1.04
H3F3B-209ENST00000589949 REPS2Q8NFH8 660 aa21.57■■□□□ 1.04
H3F3B-209ENST00000589949 LAMA3Q16787 3333 aa21.57■■□□□ 1.04
H3F3B-209ENST00000589949 TTC41PQ6P2S7 1318 aa21.56■■□□□ 1.04
H3F3B-209ENST00000589949 IGKV6D-41A0A0C4DH26 115 aa21.56■■□□□ 1.04
H3F3B-209ENST00000589949 PRDM1O75626 825 aa21.56■■□□□ 1.04
H3F3B-209ENST00000589949 ZFYP08048 801 aaPredicted RBP21.56■■□□□ 1.04
H3F3B-209ENST00000589949 CNGA1P29973 690 aa21.56■■□□□ 1.04
H3F3B-209ENST00000589949 PRAMEF19Q5SWL8 479 aa21.56■■□□□ 1.04
H3F3B-209ENST00000589949 CRBNQ96SW2 442 aa21.56■■□□□ 1.04
H3F3B-209ENST00000589949 MROH8Q9H579 483 aa21.56■■□□□ 1.04
H3F3B-209ENST00000589949 PPP1R9AQ9ULJ8 1098 aa21.56■■□□□ 1.04
H3F3B-209ENST00000589949 VWA5AO00534 786 aa21.55■■□□□ 1.04
H3F3B-209ENST00000589949 FOXP2O15409 715 aa21.55■■□□□ 1.04
H3F3B-209ENST00000589949 ANO1Q5XXA6 986 aa21.55■■□□□ 1.04
H3F3B-209ENST00000589949 GOPCQ9HD26 462 aa21.55■■□□□ 1.04
H3F3B-209ENST00000589949 ZNF214Q9UL59 606 aaPredicted RBP21.55■■□□□ 1.04
H3F3B-209ENST00000589949 PATL2C9JE40 543 aaKnown RBP21.54■■□□□ 1.04
H3F3B-209ENST00000589949 RAD21O60216 631 aa21.54■■□□□ 1.04
H3F3B-209ENST00000589949 MAGEA10P43363 369 aaPredicted RBP21.54■■□□□ 1.04
H3F3B-209ENST00000589949 ZMYM1Q5SVZ6 1142 aa21.54■■□□□ 1.04
H3F3B-209ENST00000589949 IFNL3Q8IZI9 196 aa21.54■■□□□ 1.04
H3F3B-209ENST00000589949 ABRAQ8N0Z2 381 aa21.54■■□□□ 1.04
H3F3B-209ENST00000589949 MKNK2Q9HBH9 465 aa21.54■■□□□ 1.04
H3F3B-209ENST00000589949 NYAP2Q9P242 653 aa21.54■■□□□ 1.04
H3F3B-209ENST00000589949 F5H6K3 240 aa21.53■■□□□ 1.04
H3F3B-209ENST00000589949 NDUFB10O96000 172 aa21.53■■□□□ 1.04
H3F3B-209ENST00000589949 APPP05067 770 aa21.53■■□□□ 1.04
H3F3B-209ENST00000589949 PGK2P07205 417 aa21.53■■□□□ 1.04
H3F3B-209ENST00000589949 MX1P20591 662 aa21.53■■□□□ 1.04
H3F3B-209ENST00000589949 TDO2P48775 406 aa21.53■■□□□ 1.04
H3F3B-209ENST00000589949 KLRC3Q07444 240 aa21.53■■□□□ 1.04
H3F3B-209ENST00000589949 RIOX2Q8IUF8 465 aa21.53■■□□□ 1.04
H3F3B-209ENST00000589949 MAML3Q96JK9 1138 aa21.53■■□□□ 1.04
H3F3B-209ENST00000589949 A0A1W2PPC1 479 aa21.52■■□□□ 1.04
H3F3B-209ENST00000589949 FCER1AP12319 257 aa21.52■■□□□ 1.04
H3F3B-209ENST00000589949 GNAT2P19087 354 aa21.52■■□□□ 1.04
H3F3B-209ENST00000589949 BMP8BP34820 402 aa21.52■■□□□ 1.04
H3F3B-209ENST00000589949 LRCH3Q96II8 777 aa21.52■■□□□ 1.04
H3F3B-209ENST00000589949 FSD1Q9BTV5 496 aa21.52■■□□□ 1.04
H3F3B-209ENST00000589949 SENP6Q9GZR1 1112 aaPredicted RBP21.52■■□□□ 1.04
H3F3B-209ENST00000589949 CLIP2Q9UDT6 1046 aa21.52■■□□□ 1.04
H3F3B-209ENST00000589949 ZNFX1Q9P2E3 1918 aaKnown RBP21.51■■□□□ 1.03
H3F3B-209ENST00000589949 ERC2O15083 957 aa21.51■■□□□ 1.03
H3F3B-209ENST00000589949 SLC25A27O95847 323 aa21.51■■□□□ 1.03
H3F3B-209ENST00000589949 STAT3P40763 770 aa21.51■■□□□ 1.03
H3F3B-209ENST00000589949 GJC2Q5T442 439 aaPredicted RBP21.51■■□□□ 1.03
H3F3B-209ENST00000589949 CCDC129Q6ZRS4 1044 aa21.51■■□□□ 1.03
H3F3B-209ENST00000589949 CEP95Q96GE4 821 aa21.51■■□□□ 1.03
H3F3B-209ENST00000589949 RIPK3Q9Y572 518 aa21.51■■□□□ 1.03
H3F3B-209ENST00000589949 TACC3Q9Y6A5 838 aa21.51■■□□□ 1.03
H3F3B-209ENST00000589949 MSCO60682 206 aa21.5■■□□□ 1.03
H3F3B-209ENST00000589949 ZNF792Q3KQV3 632 aa21.5■■□□□ 1.03
H3F3B-209ENST00000589949 MMP19Q99542 508 aa21.5■■□□□ 1.03
H3F3B-209ENST00000589949 INCENPQ9NQS7 918 aa21.5■■□□□ 1.03
H3F3B-209ENST00000589949 MTMR4Q9NYA4 1195 aa21.5■■□□□ 1.03
H3F3B-209ENST00000589949 DNM1LO00429 736 aa21.49■■□□□ 1.03
H3F3B-209ENST00000589949 SEPT4O43236 478 aa21.49■■□□□ 1.03
H3F3B-209ENST00000589949 TAL1P17542 331 aaPredicted RBP21.49■■□□□ 1.03
H3F3B-209ENST00000589949 ATN1P54259 1190 aaPredicted RBP21.49■■□□□ 1.03
H3F3B-209ENST00000589949 FAM47AQ5JRC9 791 aa21.49■■□□□ 1.03
H3F3B-209ENST00000589949 ANKRD45Q5TZF3 282 aa21.49■■□□□ 1.03
H3F3B-209ENST00000589949 MKL1Q969V6 931 aa21.49■■□□□ 1.03
H3F3B-209ENST00000589949 SLF1Q9BQI6 1058 aa21.49■■□□□ 1.03
H3F3B-209ENST00000589949 ZNF444Q8N0Y2 327 aaPredicted RBP21.48■■□□□ 1.03
H3F3B-209ENST00000589949 LRRC47Q8N1G4 583 aaKnown RBP21.48■■□□□ 1.03
H3F3B-209ENST00000589949 MYH4Q9Y623 1939 aa21.47■■□□□ 1.03
H3F3B-209ENST00000589949 PPARAQ07869 468 aa21.47■■□□□ 1.03
H3F3B-209ENST00000589949 VPS53Q5VIR6 699 aa21.47■■□□□ 1.03
H3F3B-209ENST00000589949 NEDD1Q8NHV4 660 aa21.47■■□□□ 1.03
H3F3B-209ENST00000589949 SLC5A4Q9NY91 659 aa21.47■■□□□ 1.03
H3F3B-209ENST00000589949 PLIN4Q96Q06 1357 aa21.47■■□□□ 1.03
H3F3B-209ENST00000589949 LRRFIP1Q32MZ4 808 aaKnown RBP21.46■■□□□ 1.03
H3F3B-209ENST00000589949 SNRNP48Q6IEG0 339 aaKnown RBP21.46■■□□□ 1.03
H3F3B-209ENST00000589949 PRPF38AQ8NAV1 312 aaKnown RBP21.46■■□□□ 1.03
H3F3B-209ENST00000589949 NACAP1Q9BZK3 213 aa21.46■■□□□ 1.03
H3F3B-209ENST00000589949 NAPBQ9H115 298 aa21.46■■□□□ 1.03
H3F3B-209ENST00000589949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.46■■□□□ 1.03
H3F3B-209ENST00000589949 SMCHD1A6NHR9 2005 aa21.46■■□□□ 1.03
H3F3B-209ENST00000589949 TTLL1O95922 423 aa21.45■■□□□ 1.02
H3F3B-209ENST00000589949 PDE1AP54750 535 aa21.45■■□□□ 1.02
H3F3B-209ENST00000589949 MDM2Q00987 491 aaPredicted RBP21.45■■□□□ 1.02
H3F3B-209ENST00000589949 TFAP4Q01664 338 aa21.45■■□□□ 1.02
H3F3B-209ENST00000589949 CTDSPL2Q05D32 466 aa21.45■■□□□ 1.02
H3F3B-209ENST00000589949 HDAC1Q13547 482 aaPredicted RBP21.45■■□□□ 1.02
H3F3B-209ENST00000589949 KCTD2Q14681 263 aa21.45■■□□□ 1.02
H3F3B-209ENST00000589949 LRRC41Q15345 812 aa21.45■■□□□ 1.02
H3F3B-209ENST00000589949 TINF2Q9BSI4 451 aa21.45■■□□□ 1.02
H3F3B-209ENST00000589949 TEX13BQ9BXU2 312 aa21.45■■□□□ 1.02
H3F3B-209ENST00000589949 RAVER2Q9HCJ3 691 aaKnown RBP21.45■■□□□ 1.02
H3F3B-209ENST00000589949 DIS3Q9Y2L1 958 aaKnown RBP21.45■■□□□ 1.02
H3F3B-209ENST00000589949 PLXNA1Q9UIW2 1896 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms