RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 PGK1P00558 417 aa21.71■■□□□ 1.07
CXXC1-211ENST00000589548 CLTBP09497 229 aa21.71■■□□□ 1.07
CXXC1-211ENST00000589548 TAL1P17542 331 aaPredicted RBP21.71■■□□□ 1.07
CXXC1-211ENST00000589548 SAMD1Q6SPF0 538 aaPredicted RBP21.71■■□□□ 1.07
CXXC1-211ENST00000589548 ITPRIPQ8IWB1 547 aa21.71■■□□□ 1.07
CXXC1-211ENST00000589548 LENG1Q96BZ8 264 aaPredicted RBP21.71■■□□□ 1.07
CXXC1-211ENST00000589548 RNPC3Q96LT9 517 aaKnown RBP21.71■■□□□ 1.07
CXXC1-211ENST00000589548 VCPKMTQ9H867 229 aa21.71■■□□□ 1.07
CXXC1-211ENST00000589548 GREB1LQ9C091 1923 aaPredicted RBP21.7■■□□□ 1.07
CXXC1-211ENST00000589548 KIAA0355O15063 1070 aa21.7■■□□□ 1.06
CXXC1-211ENST00000589548 PGK2P07205 417 aa21.7■■□□□ 1.06
CXXC1-211ENST00000589548 FCER1AP12319 257 aa21.7■■□□□ 1.06
CXXC1-211ENST00000589548 ICA1Q05084 483 aa21.7■■□□□ 1.06
CXXC1-211ENST00000589548 IL1RAPL2Q9NP60 686 aa21.7■■□□□ 1.06
CXXC1-211ENST00000589548 TACC3Q9Y6A5 838 aa21.7■■□□□ 1.06
CXXC1-211ENST00000589548 A0A1W2PQ45 241 aaPredicted RBP21.69■■□□□ 1.06
CXXC1-211ENST00000589548 A0A1W2PQY0 241 aa21.69■■□□□ 1.06
CXXC1-211ENST00000589548 RARBP10826 455 aa21.69■■□□□ 1.06
CXXC1-211ENST00000589548 TTF1Q15361 905 aaPredicted RBP21.69■■□□□ 1.06
CXXC1-211ENST00000589548 SYMPKQ92797 1274 aaKnown RBP21.69■■□□□ 1.06
CXXC1-211ENST00000589548 FBXO28Q9NVF7 368 aa21.69■■□□□ 1.06
CXXC1-211ENST00000589548 NRBP1Q9UHY1 535 aa21.69■■□□□ 1.06
CXXC1-211ENST00000589548 ADAMTS5Q9UNA0 930 aa21.69■■□□□ 1.06
CXXC1-211ENST00000589548 TMEM265A0A087WTH1 108 aa21.68■■□□□ 1.06
CXXC1-211ENST00000589548 WDR46O15213 610 aaKnown RBP21.68■■□□□ 1.06
CXXC1-211ENST00000589548 PRKAB2O43741 272 aa21.68■■□□□ 1.06
CXXC1-211ENST00000589548 PQBP1O60828 265 aaKnown RBP21.68■■□□□ 1.06
CXXC1-211ENST00000589548 ZNF865P0CJ78 1059 aaPredicted RBP21.68■■□□□ 1.06
CXXC1-211ENST00000589548 ZNF792Q3KQV3 632 aa21.68■■□□□ 1.06
CXXC1-211ENST00000589548 SLFNL1Q499Z3 407 aa21.68■■□□□ 1.06
CXXC1-211ENST00000589548 FTSJ3Q8IY81 847 aaKnown RBP21.68■■□□□ 1.06
CXXC1-211ENST00000589548 USP38Q8NB14 1042 aa21.68■■□□□ 1.06
CXXC1-211ENST00000589548 MMP19Q99542 508 aa21.68■■□□□ 1.06
CXXC1-211ENST00000589548 TINF2Q9BSI4 451 aa21.68■■□□□ 1.06
CXXC1-211ENST00000589548 ARMT1Q9H993 441 aa21.68■■□□□ 1.06
CXXC1-211ENST00000589548 ARHGEF10LQ9HCE6 1279 aa21.68■■□□□ 1.06
CXXC1-211ENST00000589548 SWAP70Q9UH65 585 aa21.68■■□□□ 1.06
CXXC1-211ENST00000589548 CYP2D7A0A087X1C5 515 aa21.67■■□□□ 1.06
CXXC1-211ENST00000589548 SLC25A27O95847 323 aa21.67■■□□□ 1.06
CXXC1-211ENST00000589548 GRIN2CQ14957 1233 aa21.67■■□□□ 1.06
CXXC1-211ENST00000589548 ERC1Q8IUD2 1116 aa21.67■■□□□ 1.06
CXXC1-211ENST00000589548 RIOX2Q8IUF8 465 aa21.67■■□□□ 1.06
CXXC1-211ENST00000589548 GOLIM4O00461 696 aa21.66■■□□□ 1.06
CXXC1-211ENST00000589548 ADAMTS4O75173 837 aa21.66■■□□□ 1.06
CXXC1-211ENST00000589548 RAG1P15918 1043 aa21.66■■□□□ 1.06
CXXC1-211ENST00000589548 RNF180Q86T96 592 aa21.66■■□□□ 1.06
CXXC1-211ENST00000589548 REPS2Q8NFH8 660 aa21.66■■□□□ 1.06
CXXC1-211ENST00000589548 DNAJC2Q99543 621 aaKnown RBP21.66■■□□□ 1.06
CXXC1-211ENST00000589548 SH2D4AQ9H788 454 aa21.66■■□□□ 1.06
CXXC1-211ENST00000589548 GBF1Q92538 1859 aa21.65■■□□□ 1.06
CXXC1-211ENST00000589548 CCER2I3L3R5 266 aa21.65■■□□□ 1.06
CXXC1-211ENST00000589548 DNAJB2P25686 324 aa21.65■■□□□ 1.06
CXXC1-211ENST00000589548 FPGSQ05932 587 aa21.65■■□□□ 1.06
CXXC1-211ENST00000589548 FAAP100Q0VG06 881 aa21.65■■□□□ 1.06
CXXC1-211ENST00000589548 RHPN1Q8TCX5 695 aa21.65■■□□□ 1.06
CXXC1-211ENST00000589548 ZNF214Q9UL59 606 aaPredicted RBP21.65■■□□□ 1.06
CXXC1-211ENST00000589548 DIS3Q9Y2L1 958 aaKnown RBP21.65■■□□□ 1.06
CXXC1-211ENST00000589548 MBD4O95243 580 aa21.64■■□□□ 1.05
CXXC1-211ENST00000589548 EEF2P13639 858 aaKnown RBP21.64■■□□□ 1.05
CXXC1-211ENST00000589548 AKR1A1P14550 325 aa21.64■■□□□ 1.05
CXXC1-211ENST00000589548 CDK8P49336 464 aa21.64■■□□□ 1.05
CXXC1-211ENST00000589548 ANKRD33Q7Z3H0 272 aa21.64■■□□□ 1.05
CXXC1-211ENST00000589548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.64■■□□□ 1.05
CXXC1-211ENST00000589548 TMEM39AQ9NV64 488 aa21.64■■□□□ 1.05
CXXC1-211ENST00000589548 MYH4Q9Y623 1939 aa21.63■■□□□ 1.05
CXXC1-211ENST00000589548 SYNRGQ9UMZ2 1314 aa21.63■■□□□ 1.05
CXXC1-211ENST00000589548 VWA5AO00534 786 aa21.63■■□□□ 1.05
CXXC1-211ENST00000589548 CHGBP05060 677 aa21.63■■□□□ 1.05
CXXC1-211ENST00000589548 STAT3P40763 770 aa21.63■■□□□ 1.05
CXXC1-211ENST00000589548 KCTD2Q14681 263 aa21.63■■□□□ 1.05
CXXC1-211ENST00000589548 C12orf60Q5U649 245 aa21.63■■□□□ 1.05
CXXC1-211ENST00000589548 CCDC17Q96LX7 622 aa21.63■■□□□ 1.05
CXXC1-211ENST00000589548 PPP1R9AQ9ULJ8 1098 aa21.63■■□□□ 1.05
CXXC1-211ENST00000589548 ACLYP53396 1101 aa21.62■■□□□ 1.05
CXXC1-211ENST00000589548 C16orf86Q6ZW13 317 aa21.62■■□□□ 1.05
CXXC1-211ENST00000589548 TOX2Q96NM4 488 aa21.62■■□□□ 1.05
CXXC1-211ENST00000589548 TSEN34Q9BSV6 310 aaKnown RBP21.62■■□□□ 1.05
CXXC1-211ENST00000589548 ATP8A2Q9NTI2 1148 aa21.62■■□□□ 1.05
CXXC1-211ENST00000589548 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.61■■□□□ 1.05
CXXC1-211ENST00000589548 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.61■■□□□ 1.05
CXXC1-211ENST00000589548 MYADML2A6NDP7 307 aa21.61■■□□□ 1.05
CXXC1-211ENST00000589548 ADD2P35612 726 aa21.61■■□□□ 1.05
CXXC1-211ENST00000589548 IRX5P78411 483 aaPredicted RBP21.61■■□□□ 1.05
CXXC1-211ENST00000589548 FAM83BQ5T0W9 1011 aa21.61■■□□□ 1.05
CXXC1-211ENST00000589548 CCSAPQ6IQ19 270 aaPredicted RBP21.61■■□□□ 1.05
CXXC1-211ENST00000589548 KLHDC9Q8NEP7 349 aa21.61■■□□□ 1.05
CXXC1-211ENST00000589548 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.61■■□□□ 1.053e-7■■■□□ 17.3
CXXC1-211ENST00000589548 ZNF576Q9H609 170 aa21.61■■□□□ 1.05
CXXC1-211ENST00000589548 STARD7Q9NQZ5 370 aa21.61■■□□□ 1.05
CXXC1-211ENST00000589548 TBX21Q9UL17 535 aa21.61■■□□□ 1.05
CXXC1-211ENST00000589548 CHD9Q3L8U1 2897 aa21.61■■□□□ 1.05
CXXC1-211ENST00000589548 USP17L12C9JPN9 530 aa21.6■■□□□ 1.05
CXXC1-211ENST00000589548 USP17L21D6R901 530 aa21.6■■□□□ 1.05
CXXC1-211ENST00000589548 SNAI1O95863 264 aaPredicted RBP21.6■■□□□ 1.05
CXXC1-211ENST00000589548 COL9A1P20849 921 aa21.6■■□□□ 1.05
CXXC1-211ENST00000589548 TJAP1Q5JTD0 557 aa21.6■■□□□ 1.05
CXXC1-211ENST00000589548 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.6■■□□□ 1.05
CXXC1-211ENST00000589548 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
CXXC1-211ENST00000589548 DCDC2CA8MYV0 355 aa21.59■■□□□ 1.05
CXXC1-211ENST00000589548 APBB1O00213 710 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms