RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 USP17L11C9JVI0 530 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 USP17L18D6R9N7 530 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 USP17L22D6RA61 530 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 USP17L17D6RBQ6 530 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 USP17L19D6RCP7 530 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 USP17L20D6RJB6 530 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 PDHBP11177 359 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 BMP3P12645 472 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 APOBRQ0VD83 1088 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 USP17L24Q0WX57 530 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 TOB2Q14106 344 aaPredicted RBP18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 RABEP1Q15276 862 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 SYNE3Q6ZMZ3 975 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 MYL10Q9BUA6 226 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 AGXT2Q9BYV1 514 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 SLC45A1Q9Y2W3 748 aa18.09■□□□□ 0.49
RPRD1A-208ENST00000589050 KLF18A0A0U1RQI7 1052 aa18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 DDAH1O94760 285 aa18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 OSBPP22059 807 aa18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 HOXA7P31268 230 aaPredicted RBP18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 IRX3P78415 501 aaPredicted RBP18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 CATSPERGQ6ZRH7 1159 aa18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 KCTD1Q719H9 257 aa18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 NUP133Q8WUM0 1156 aa18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 ALDH8A1Q9H2A2 487 aaPredicted RBP18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 BRPF3Q9ULD4 1205 aa18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 MYH4Q9Y623 1939 aa18.08■□□□□ 0.48
RPRD1A-208ENST00000589050 FRMPD2Q68DX3 1309 aaPredicted RBP18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 TMEM232C9JQI7 657 aa18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 PARP1P09874 1014 aaKnown RBP18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 SNHG28P0DPA3 235 aa18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 AK2P54819 239 aa18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 TROAPQ12815 778 aa18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 APOA5Q6Q788 366 aa18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 RAB11FIP4Q86YS3 637 aa18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 LARP6Q9BRS8 491 aaKnown RBP18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 ASCC2Q9H1I8 757 aaPredicted RBP18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 ZCCHC17Q9NP64 241 aaKnown RBP18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 GPCPD1Q9NPB8 672 aa18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 PNMA3Q9UL41 463 aa18.07■□□□□ 0.48
RPRD1A-208ENST00000589050 PTPRFP10586 1907 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 FLOT1O75955 427 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 ALDH1A1P00352 501 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 GOLGA8HP0CJ92 632 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 CALM1P0DP23 149 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 CALM2P0DP24 149 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 CALM3P0DP25 149 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 RXRAP19793 462 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 ZNF543Q08ER8 600 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 IKQ13123 557 aaPredicted RBP18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 GRM4Q14833 912 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 ANKRD1Q15327 319 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 ASPRV1Q53RT3 343 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 MICU3Q86XE3 530 aa18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 PARK7Q99497 189 aaKnown RBP18.06■□□□□ 0.48
RPRD1A-208ENST00000589050 GOLGA8BA8MQT2 603 aa18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 ZBTB43O43298 467 aa18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 CYP2C8P10632 490 aa18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 STAT2P52630 851 aa18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 TAF1CQ15572 869 aaPredicted RBP18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 GPATCH4Q5T3I0 446 aaKnown RBP18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 NOL8Q76FK4 1167 aaKnown RBP18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 CCDC144CPQ8IYA2 1237 aa18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 CTCFLQ8NI51 663 aaPredicted RBP18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 P2RX7Q99572 595 aaKnown RBP18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 FBXO28Q9NVF7 368 aa18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 FEM1BQ9UK73 627 aa18.05■□□□□ 0.48
RPRD1A-208ENST00000589050 GOLGA8AA7E2F4 631 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 KIF5BP33176 963 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 EVCP57679 992 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 MAP2K1Q02750 393 aaPredicted RBP18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 COG2Q14746 738 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 TTBK2Q6IQ55 1244 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 FAM160B2Q86V87 743 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 SMCR8Q8TEV9 937 aaPredicted RBP18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 CHURC1Q8WUH1 139 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 MAP3K14Q99558 947 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 SLF1Q9BQI6 1058 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 RNF186Q9NXI6 227 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 MAD2L2Q9UI95 211 aa18.04■□□□□ 0.48
RPRD1A-208ENST00000589050 PALM3A6NDB9 673 aaPredicted RBP18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 ST18O60284 1047 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 DSG3P32926 999 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 SLC16A2P36021 539 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 METAP2P50579 478 aaKnown RBP eCLIP18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 HERVK_113P62684 666 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 STAG2Q8N3U4 1231 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 FANCBQ8NB91 859 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 KIFC2Q96AC6 838 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 ZFYVE28Q9HCC9 887 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 HOXC10Q9NYD6 342 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 PPP1R9AQ9ULJ8 1098 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 TPCN1Q9ULQ1 816 aa18.03■□□□□ 0.48
RPRD1A-208ENST00000589050 MYPNQ86TC9 1320 aa18.02■□□□□ 0.48
RPRD1A-208ENST00000589050 SPDYE16A6NNV3 312 aaPredicted RBP18.02■□□□□ 0.48
RPRD1A-208ENST00000589050 KLRF2D3W0D1 207 aa18.02■□□□□ 0.48
RPRD1A-208ENST00000589050 CA12O43570 354 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms