RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 PARK7Q99497 189 aaKnown RBP13.01□□□□□ -0.33
CDK3-204ENST00000588812 LRRC2Q9BYS8 371 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
CDK3-204ENST00000588812 TANGO6Q9C0B7 1094 aa13.01□□□□□ -0.33
CDK3-204ENST00000588812 BMP3P12645 472 aa13□□□□□ -0.33
CDK3-204ENST00000588812 TAF1CQ15572 869 aaPredicted RBP13□□□□□ -0.33
CDK3-204ENST00000588812 FAM83BQ5T0W9 1011 aa13□□□□□ -0.33
CDK3-204ENST00000588812 Q6ZUG5 572 aa13□□□□□ -0.33
CDK3-204ENST00000588812 CFHR5Q9BXR6 569 aa13□□□□□ -0.33
CDK3-204ENST00000588812 ASCC2Q9H1I8 757 aaPredicted RBP13□□□□□ -0.33
CDK3-204ENST00000588812 SENP2Q9HC62 589 aa13□□□□□ -0.33
CDK3-204ENST00000588812 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
CDK3-204ENST00000588812 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
CDK3-204ENST00000588812 RNF186Q9NXI6 227 aa13□□□□□ -0.33
CDK3-204ENST00000588812 SAGE1Q9NXZ1 904 aa13□□□□□ -0.33
CDK3-204ENST00000588812 HOXC10Q9NYD6 342 aa13□□□□□ -0.33
CDK3-204ENST00000588812 MTMR7Q9Y216 660 aa13□□□□□ -0.33
CDK3-204ENST00000588812 SLC12A7Q9Y666 1083 aa13□□□□□ -0.33
CDK3-204ENST00000588812 MYPNQ86TC9 1320 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 PLA2G6O60733 806 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 TRPA1O75762 1119 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 DDAH1O94760 285 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 HSPA1AP0DMV8 641 aaKnown RBP12.99□□□□□ -0.33
CDK3-204ENST00000588812 HSPA1BP0DMV9 641 aaKnown RBP12.99□□□□□ -0.33
CDK3-204ENST00000588812 SNHG28P0DPA3 235 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 PDHBP11177 359 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 COG2Q14746 738 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 CCDC96Q2M329 555 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
CDK3-204ENST00000588812 SYNE3Q6ZMZ3 975 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 ZNF654Q8IZM8 581 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 IL27Q8NEV9 243 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 SMCR8Q8TEV9 937 aaPredicted RBP12.99□□□□□ -0.33
CDK3-204ENST00000588812 CHURC1Q8WUH1 139 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 NUP88Q99567 741 aaPredicted RBP12.99□□□□□ -0.33
CDK3-204ENST00000588812 AGXT2Q9BYV1 514 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 ALDH8A1Q9H2A2 487 aaPredicted RBP12.99□□□□□ -0.33
CDK3-204ENST00000588812 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 WBP1LQ9NX94 342 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 FEM1BQ9UK73 627 aa12.99□□□□□ -0.33
CDK3-204ENST00000588812 ISY1Q9ULR0 285 aaKnown RBP12.99□□□□□ -0.33
CDK3-204ENST00000588812 TMEM232C9JQI7 657 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 FLOT1O75955 427 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 PARP1P09874 1014 aaKnown RBP12.98□□□□□ -0.33
CDK3-204ENST00000588812 CALM1P0DP23 149 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 CALM2P0DP24 149 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 CALM3P0DP25 149 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 CYP2C8P10632 490 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 GCLCP48506 637 aaPredicted RBP12.98□□□□□ -0.33
CDK3-204ENST00000588812 NEK4P51957 841 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 STAT2P52630 851 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 HERVK_113P62684 666 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 ZNF543Q08ER8 600 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 TROAPQ12815 778 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 ASPRV1Q53RT3 343 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 FAM160B2Q86V87 743 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 PRPF38AQ8NAV1 312 aaKnown RBP12.98□□□□□ -0.33
CDK3-204ENST00000588812 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
CDK3-204ENST00000588812 BRF1Q92994 677 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 MAP3K14Q99558 947 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 P2RX7Q99572 595 aaKnown RBP12.98□□□□□ -0.33
CDK3-204ENST00000588812 KIF2CQ99661 725 aa12.98□□□□□ -0.33
CDK3-204ENST00000588812 TLR2O60603 784 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 DSG3P32926 999 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 KIF5BP33176 963 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 RCAN1P53805 252 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 IKQ13123 557 aaPredicted RBP12.97□□□□□ -0.33
CDK3-204ENST00000588812 CRHR2Q13324 411 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 RABEP1Q15276 862 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 ANKRD1Q15327 319 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 APOA5Q6Q788 366 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 LBX2Q6XYB7 198 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 KCTD1Q719H9 257 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 NUP133Q8WUM0 1156 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 CHMP4CQ96CF2 233 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 PPP1R9AQ9ULJ8 1098 aa12.97□□□□□ -0.33
CDK3-204ENST00000588812 KLF18A0A0U1RQI7 1052 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 SPDYE16A6NNV3 312 aaPredicted RBP12.96□□□□□ -0.33
CDK3-204ENST00000588812 ZBTB43O43298 467 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 FDX1P10109 184 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 EVCP57679 992 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 APOBRQ0VD83 1088 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 TOB2Q14106 344 aaPredicted RBP12.96□□□□□ -0.33
CDK3-204ENST00000588812 GRM4Q14833 912 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 PPP2R5BQ15173 497 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 COL13A1Q5TAT6 717 aaPredicted RBP12.96□□□□□ -0.33
CDK3-204ENST00000588812 BTNL9Q6UXG8 535 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 RASGRP2Q7LDG7 609 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 MB21D1Q8N884 522 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 CTCFLQ8NI51 663 aaPredicted RBP12.96□□□□□ -0.33
CDK3-204ENST00000588812 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 FBXO28Q9NVF7 368 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 BRPF3Q9ULD4 1205 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 RABGAP1Q9Y3P9 1069 aa12.96□□□□□ -0.33
CDK3-204ENST00000588812 FRMPD2Q68DX3 1309 aaPredicted RBP12.95□□□□□ -0.34
CDK3-204ENST00000588812 ADGRA2Q96PE1 1338 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 PALM3A6NDB9 673 aaPredicted RBP12.95□□□□□ -0.34
CDK3-204ENST00000588812 KLRF2D3W0D1 207 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms