RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SH2D4AQ9H788 454 aa22.22■■□□□ 1.15
CCDC43-204ENST00000588687 FBXO28Q9NVF7 368 aa22.22■■□□□ 1.15
CCDC43-204ENST00000588687 COG6Q9Y2V7 657 aa22.22■■□□□ 1.15
CCDC43-204ENST00000588687 SMCHD1A6NHR9 2005 aa22.22■■□□□ 1.15
CCDC43-204ENST00000588687 USP17L12C9JPN9 530 aa22.21■■□□□ 1.15
CCDC43-204ENST00000588687 USP17L21D6R901 530 aa22.21■■□□□ 1.15
CCDC43-204ENST00000588687 UBE3CQ15386 1083 aa22.21■■□□□ 1.15
CCDC43-204ENST00000588687 FAM47AQ5JRC9 791 aa22.21■■□□□ 1.15
CCDC43-204ENST00000588687 PRAMEF19Q5SWL8 479 aa22.21■■□□□ 1.15
CCDC43-204ENST00000588687 SLC39A5Q6ZMH5 540 aa22.21■■□□□ 1.15
CCDC43-204ENST00000588687 NCAPG2Q86XI2 1143 aa22.21■■□□□ 1.15
CCDC43-204ENST00000588687 ARRDC4Q8NCT1 418 aa22.21■■□□□ 1.15
CCDC43-204ENST00000588687 REPS2Q8NFH8 660 aa22.21■■□□□ 1.15
CCDC43-204ENST00000588687 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.21■■□□□ 1.15
CCDC43-204ENST00000588687 EEF2P13639 858 aaKnown RBP22.2■■□□□ 1.14
CCDC43-204ENST00000588687 PLS1Q14651 629 aa22.2■■□□□ 1.14
CCDC43-204ENST00000588687 LRRC41Q15345 812 aa22.2■■□□□ 1.14
CCDC43-204ENST00000588687 LBHD1Q9BQE6 289 aaPredicted RBP22.2■■□□□ 1.14
CCDC43-204ENST00000588687 PDLIM7Q9NR12 457 aa22.2■■□□□ 1.14
CCDC43-204ENST00000588687 ZNF214Q9UL59 606 aaPredicted RBP22.2■■□□□ 1.14
CCDC43-204ENST00000588687 ATP11BQ9Y2G3 1177 aa22.2■■□□□ 1.14
CCDC43-204ENST00000588687 KBTBD13C9JR72 458 aa22.19■■□□□ 1.14
CCDC43-204ENST00000588687 MS4A1P11836 297 aa22.19■■□□□ 1.14
CCDC43-204ENST00000588687 TRIM60Q495X7 471 aa22.19■■□□□ 1.14
CCDC43-204ENST00000588687 C1orf53Q5VUE5 145 aa22.19■■□□□ 1.14
CCDC43-204ENST00000588687 CTR9Q6PD62 1173 aa22.19■■□□□ 1.14
CCDC43-204ENST00000588687 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.19■■□□□ 1.14
CCDC43-204ENST00000588687 PUS7LQ9H0K6 701 aaKnown RBP22.19■■□□□ 1.14
CCDC43-204ENST00000588687 FCER1AP12319 257 aa22.18■■□□□ 1.14
CCDC43-204ENST00000588687 RIOX2Q8IUF8 465 aa22.18■■□□□ 1.14
CCDC43-204ENST00000588687 SLC5A4Q9NY91 659 aa22.18■■□□□ 1.14
CCDC43-204ENST00000588687 NRBP1Q9UHY1 535 aa22.18■■□□□ 1.14
CCDC43-204ENST00000588687 PPP1R9AQ9ULJ8 1098 aa22.18■■□□□ 1.14
CCDC43-204ENST00000588687 VWA5AO00534 786 aa22.17■■□□□ 1.14
CCDC43-204ENST00000588687 SLC25A27O95847 323 aa22.17■■□□□ 1.14
CCDC43-204ENST00000588687 ZNF792Q3KQV3 632 aa22.17■■□□□ 1.14
CCDC43-204ENST00000588687 C9orf50Q5SZB4 431 aa22.17■■□□□ 1.14
CCDC43-204ENST00000588687 KANSL2Q9H9L4 492 aa22.17■■□□□ 1.14
CCDC43-204ENST00000588687 MUC3AQ02505 3323 aa22.16■■□□□ 1.14
CCDC43-204ENST00000588687 TRIM43BA6NCK2 446 aa22.16■■□□□ 1.14
CCDC43-204ENST00000588687 PGK2P07205 417 aa22.16■■□□□ 1.14
CCDC43-204ENST00000588687 ADCYAP1R1P41586 468 aa22.16■■□□□ 1.14
CCDC43-204ENST00000588687 SH3RF1Q7Z6J0 888 aa22.16■■□□□ 1.14
CCDC43-204ENST00000588687 TRIM43Q96BQ3 446 aaPredicted RBP22.16■■□□□ 1.14
CCDC43-204ENST00000588687 BCL11AQ9H165 835 aa22.16■■□□□ 1.14
CCDC43-204ENST00000588687 PRKAG2Q9UGJ0 569 aa22.16■■□□□ 1.14
CCDC43-204ENST00000588687 PHF24Q9UPV7 400 aa22.16■■□□□ 1.14
CCDC43-204ENST00000588687 SLC4A4Q9Y6R1 1079 aa22.16■■□□□ 1.14
CCDC43-204ENST00000588687 TAL1P17542 331 aaPredicted RBP22.15■■□□□ 1.14
CCDC43-204ENST00000588687 SHHQ15465 462 aa22.15■■□□□ 1.14
CCDC43-204ENST00000588687 FAM83BQ5T0W9 1011 aa22.15■■□□□ 1.14
CCDC43-204ENST00000588687 MMP19Q99542 508 aa22.15■■□□□ 1.14
CCDC43-204ENST00000588687 ARPP21Q9UBL0 812 aaPredicted RBP22.15■■□□□ 1.14
CCDC43-204ENST00000588687 MYH4Q9Y623 1939 aa22.14■■□□□ 1.14
CCDC43-204ENST00000588687 ZNF865P0CJ78 1059 aaPredicted RBP22.14■■□□□ 1.13
CCDC43-204ENST00000588687 SAMD1Q6SPF0 538 aaPredicted RBP22.14■■□□□ 1.13
CCDC43-204ENST00000588687 BADQ92934 168 aa22.14■■□□□ 1.13
CCDC43-204ENST00000588687 FERMT2Q96AC1 680 aa22.14■■□□□ 1.13
CCDC43-204ENST00000588687 TINF2Q9BSI4 451 aa22.14■■□□□ 1.13
CCDC43-204ENST00000588687 XPNPEP3Q9NQH7 507 aa22.14■■□□□ 1.13
CCDC43-204ENST00000588687 DIS3Q9Y2L1 958 aaKnown RBP22.14■■□□□ 1.13
CCDC43-204ENST00000588687 RASA1P20936 1047 aa22.13■■□□□ 1.13
CCDC43-204ENST00000588687 ITGB8P26012 769 aa22.13■■□□□ 1.13
CCDC43-204ENST00000588687 STAT3P40763 770 aa22.13■■□□□ 1.13
CCDC43-204ENST00000588687 AMOTL1Q8IY63 956 aa22.13■■□□□ 1.13
CCDC43-204ENST00000588687 LENG1Q96BZ8 264 aaPredicted RBP22.13■■□□□ 1.13
CCDC43-204ENST00000588687 STRBPQ96SI9 672 aaKnown RBP22.13■■□□□ 1.13
CCDC43-204ENST00000588687 GOPCQ9HD26 462 aa22.13■■□□□ 1.13
CCDC43-204ENST00000588687 PRDM5Q9NQX1 630 aaPredicted RBP22.13■■□□□ 1.13
CCDC43-204ENST00000588687 GSG1L2A8MUP6 293 aa22.12■■□□□ 1.13
CCDC43-204ENST00000588687 SMARCA5O60264 1052 aaPredicted RBP22.12■■□□□ 1.13
CCDC43-204ENST00000588687 ADAMTS4O75173 837 aa22.12■■□□□ 1.13
CCDC43-204ENST00000588687 SBK1Q52WX2 424 aa22.12■■□□□ 1.13
CCDC43-204ENST00000588687 C20orf194Q5TEA3 1177 aa22.12■■□□□ 1.13
CCDC43-204ENST00000588687 FAM161BQ96MY7 647 aa22.12■■□□□ 1.13
CCDC43-204ENST00000588687 NUP88Q99567 741 aaPredicted RBP22.12■■□□□ 1.13
CCDC43-204ENST00000588687 LRRCC1Q9C099 1032 aa22.12■■□□□ 1.13
CCDC43-204ENST00000588687 CHD9Q3L8U1 2897 aa22.11■■□□□ 1.13
CCDC43-204ENST00000588687 IGKV6D-41A0A0C4DH26 115 aa22.11■■□□□ 1.13
CCDC43-204ENST00000588687 PGK1P00558 417 aa22.11■■□□□ 1.13
CCDC43-204ENST00000588687 MYCNP04198 464 aaPredicted RBP22.11■■□□□ 1.13
CCDC43-204ENST00000588687 RARBP10826 455 aa22.11■■□□□ 1.13
CCDC43-204ENST00000588687 TLE2Q04725 743 aa22.11■■□□□ 1.13
CCDC43-204ENST00000588687 KCTD2Q14681 263 aa22.11■■□□□ 1.13
CCDC43-204ENST00000588687 DDRGK1Q96HY6 314 aa22.11■■□□□ 1.13
CCDC43-204ENST00000588687 EPB41L4AQ9HCS5 686 aaPredicted RBP22.11■■□□□ 1.13
CCDC43-204ENST00000588687 DNAJC25-GNG10A0A024R161 153 aa22.1■■□□□ 1.13
CCDC43-204ENST00000588687 A0A1W2PQ45 241 aaPredicted RBP22.1■■□□□ 1.13
CCDC43-204ENST00000588687 A0A1W2PQY0 241 aa22.1■■□□□ 1.13
CCDC43-204ENST00000588687 COPB2P35606 906 aa22.1■■□□□ 1.13
CCDC43-204ENST00000588687 ZNF697Q5TEC3 545 aa22.1■■□□□ 1.13
CCDC43-204ENST00000588687 ZSCAN25Q6NSZ9 544 aa22.1■■□□□ 1.13
CCDC43-204ENST00000588687 OSBP2Q969R2 916 aa22.1■■□□□ 1.13
CCDC43-204ENST00000588687 RIPK3Q9Y572 518 aa22.1■■□□□ 1.13
CCDC43-204ENST00000588687 MCM3APO60318 1980 aa22.1■■□□□ 1.13
CCDC43-204ENST00000588687 NDUFB10O96000 172 aa22.09■■□□□ 1.13
CCDC43-204ENST00000588687 EPHB4P54760 987 aa22.09■■□□□ 1.13
CCDC43-204ENST00000588687 DIEXFQ68CQ4 756 aaKnown RBP22.09■■□□□ 1.13
CCDC43-204ENST00000588687 GIMAP6Q6P9H5 292 aa22.09■■□□□ 1.13
CCDC43-204ENST00000588687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms