RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ABRAQ8N0Z2 381 aa17■□□□□ 0.31
ERCC1-205ENST00000587888 MAML3Q96JK9 1138 aa17■□□□□ 0.31
ERCC1-205ENST00000587888 PRKAG2Q9UGJ0 569 aa17■□□□□ 0.31
ERCC1-205ENST00000587888 ATP11BQ9Y2G3 1177 aa17■□□□□ 0.31
ERCC1-205ENST00000587888 SZT2Q5T011 3432 aa16.99■□□□□ 0.31
ERCC1-205ENST00000587888 SEPT4O43236 478 aa16.99■□□□□ 0.31
ERCC1-205ENST00000587888 SLC25A27O95847 323 aa16.99■□□□□ 0.31
ERCC1-205ENST00000587888 PGK2P07205 417 aa16.99■□□□□ 0.31
ERCC1-205ENST00000587888 SLC39A5Q6ZMH5 540 aa16.99■□□□□ 0.31
ERCC1-205ENST00000587888 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
ERCC1-205ENST00000587888 MMP19Q99542 508 aa16.99■□□□□ 0.31
ERCC1-205ENST00000587888 GOPCQ9HD26 462 aa16.99■□□□□ 0.31
ERCC1-205ENST00000587888 MINDY4BA8MYZ0 360 aa16.98■□□□□ 0.31
ERCC1-205ENST00000587888 ADCYAP1R1P41586 468 aa16.98■□□□□ 0.31
ERCC1-205ENST00000587888 FAM83BQ5T0W9 1011 aa16.98■□□□□ 0.31
ERCC1-205ENST00000587888 FERMT2Q96AC1 680 aa16.98■□□□□ 0.31
ERCC1-205ENST00000587888 MKNK2Q9HBH9 465 aa16.98■□□□□ 0.31
ERCC1-205ENST00000587888 ECHDC1Q9NTX5 307 aa16.98■□□□□ 0.31
ERCC1-205ENST00000587888 ADAMTS5Q9UNA0 930 aa16.98■□□□□ 0.31
ERCC1-205ENST00000587888 RANBP2P49792 3224 aaKnown RBP16.98■□□□□ 0.31
ERCC1-205ENST00000587888 VWA5AO00534 786 aa16.97■□□□□ 0.31
ERCC1-205ENST00000587888 DLL1O00548 723 aa16.97■□□□□ 0.31
ERCC1-205ENST00000587888 STAT3P40763 770 aa16.97■□□□□ 0.31
ERCC1-205ENST00000587888 KCTD2Q14681 263 aa16.97■□□□□ 0.31
ERCC1-205ENST00000587888 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.97■□□□□ 0.31
ERCC1-205ENST00000587888 PRDM5Q9NQX1 630 aaPredicted RBP16.97■□□□□ 0.31
ERCC1-205ENST00000587888 MTMR10Q9NXD2 777 aa16.97■□□□□ 0.31
ERCC1-205ENST00000587888 ARPP21Q9UBL0 812 aaPredicted RBP16.97■□□□□ 0.31
ERCC1-205ENST00000587888 A0A0G2JMZ2 1700 aa16.96■□□□□ 0.31
ERCC1-205ENST00000587888 ZNFX1Q9P2E3 1918 aaKnown RBP16.96■□□□□ 0.31
ERCC1-205ENST00000587888 GSG1L2A8MUP6 293 aa16.96■□□□□ 0.31
ERCC1-205ENST00000587888 SLC4A3P48751 1232 aa16.96■□□□□ 0.31
ERCC1-205ENST00000587888 LRRC41Q15345 812 aa16.96■□□□□ 0.31
ERCC1-205ENST00000587888 FAM47AQ5JRC9 791 aa16.96■□□□□ 0.31
ERCC1-205ENST00000587888 TSHZ3Q63HK5 1081 aa16.96■□□□□ 0.31
ERCC1-205ENST00000587888 RIOX2Q8IUF8 465 aa16.96■□□□□ 0.31
ERCC1-205ENST00000587888 NUP88Q99567 741 aaPredicted RBP16.96■□□□□ 0.31
ERCC1-205ENST00000587888 PPP1R9AQ9ULJ8 1098 aa16.96■□□□□ 0.31
ERCC1-205ENST00000587888 ZNF236Q9UL36 1845 aa16.96■□□□□ 0.3
ERCC1-205ENST00000587888 APPP05067 770 aa16.95■□□□□ 0.3
ERCC1-205ENST00000587888 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
ERCC1-205ENST00000587888 RASA1P20936 1047 aa16.95■□□□□ 0.3
ERCC1-205ENST00000587888 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
ERCC1-205ENST00000587888 SBK1Q52WX2 424 aa16.95■□□□□ 0.3
ERCC1-205ENST00000587888 KBTBD3Q8NAB2 608 aa16.95■□□□□ 0.3
ERCC1-205ENST00000587888 OSBP2Q969R2 916 aa16.95■□□□□ 0.3
ERCC1-205ENST00000587888 CLIP2Q9UDT6 1046 aa16.95■□□□□ 0.3
ERCC1-205ENST00000587888 MYH7P12883 1935 aa16.95■□□□□ 0.3
ERCC1-205ENST00000587888 COL11A1P12107 1806 aaPredicted RBP16.95■□□□□ 0.3
ERCC1-205ENST00000587888 F5H6K3 240 aa16.94■□□□□ 0.3
ERCC1-205ENST00000587888 RNF113AO15541 343 aaKnown RBP16.94■□□□□ 0.3
ERCC1-205ENST00000587888 KLRC3Q07444 240 aa16.94■□□□□ 0.3
ERCC1-205ENST00000587888 ZNF792Q3KQV3 632 aa16.94■□□□□ 0.3
ERCC1-205ENST00000587888 GPATCH3Q96I76 525 aa16.94■□□□□ 0.3
ERCC1-205ENST00000587888 TINF2Q9BSI4 451 aa16.94■□□□□ 0.3
ERCC1-205ENST00000587888 DCTPP1Q9H773 170 aa16.94■□□□□ 0.3
ERCC1-205ENST00000587888 XPNPEP3Q9NQH7 507 aa16.94■□□□□ 0.3
ERCC1-205ENST00000587888 STXBP5LQ9Y2K9 1186 aa16.94■□□□□ 0.3
ERCC1-205ENST00000587888 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
ERCC1-205ENST00000587888 PGK1P00558 417 aa16.93■□□□□ 0.3
ERCC1-205ENST00000587888 RARBP10826 455 aa16.93■□□□□ 0.3
ERCC1-205ENST00000587888 ZNF444Q8N0Y2 327 aaPredicted RBP16.93■□□□□ 0.3
ERCC1-205ENST00000587888 REPS2Q8NFH8 660 aa16.93■□□□□ 0.3
ERCC1-205ENST00000587888 APPBP2Q92624 585 aa16.93■□□□□ 0.3
ERCC1-205ENST00000587888 BADQ92934 168 aa16.93■□□□□ 0.3
ERCC1-205ENST00000587888 FAM161BQ96MY7 647 aa16.93■□□□□ 0.3
ERCC1-205ENST00000587888 SLF1Q9BQI6 1058 aa16.93■□□□□ 0.3
ERCC1-205ENST00000587888 NYAP2Q9P242 653 aa16.93■□□□□ 0.3
ERCC1-205ENST00000587888 ZNF214Q9UL59 606 aaPredicted RBP16.93■□□□□ 0.3
ERCC1-205ENST00000587888 PRDM1O75626 825 aa16.92■□□□□ 0.3
ERCC1-205ENST00000587888 TDO2P48775 406 aa16.92■□□□□ 0.3
ERCC1-205ENST00000587888 SHHQ15465 462 aa16.92■□□□□ 0.3
ERCC1-205ENST00000587888 SNRNP48Q6IEG0 339 aaKnown RBP16.92■□□□□ 0.3
ERCC1-205ENST00000587888 GIMAP6Q6P9H5 292 aa16.92■□□□□ 0.3
ERCC1-205ENST00000587888 SH3RF1Q7Z6J0 888 aa16.92■□□□□ 0.3
ERCC1-205ENST00000587888 CPXCR1Q8N123 301 aa16.92■□□□□ 0.3
ERCC1-205ENST00000587888 DDX11Q96FC9 970 aa16.92■□□□□ 0.3
ERCC1-205ENST00000587888 NRBP1Q9UHY1 535 aa16.92■□□□□ 0.3
ERCC1-205ENST00000587888 DIS3Q9Y2L1 958 aaKnown RBP16.92■□□□□ 0.3
ERCC1-205ENST00000587888 RIPK3Q9Y572 518 aa16.92■□□□□ 0.3
ERCC1-205ENST00000587888 CTDP1Q9Y5B0 961 aaPredicted RBP16.92■□□□□ 0.3
ERCC1-205ENST00000587888 SMCHD1A6NHR9 2005 aa16.91■□□□□ 0.3
ERCC1-205ENST00000587888 TRIM43BA6NCK2 446 aa16.91■□□□□ 0.3
ERCC1-205ENST00000587888 POTEB2H3BUK9 544 aa16.91■□□□□ 0.3
ERCC1-205ENST00000587888 M0R2C6 588 aa16.91■□□□□ 0.3
ERCC1-205ENST00000587888 GPAA1O43292 621 aa16.91■□□□□ 0.3
ERCC1-205ENST00000587888 ZBED4O75132 1171 aa16.91■□□□□ 0.3
ERCC1-205ENST00000587888 NDUFB10O96000 172 aa16.91■□□□□ 0.3
ERCC1-205ENST00000587888 COPB2P35606 906 aa16.91■□□□□ 0.3
ERCC1-205ENST00000587888 RNF180Q86T96 592 aa16.91■□□□□ 0.3
ERCC1-205ENST00000587888 PRPF38AQ8NAV1 312 aaKnown RBP16.91■□□□□ 0.3
ERCC1-205ENST00000587888 TRIM43Q96BQ3 446 aaPredicted RBP16.91■□□□□ 0.3
ERCC1-205ENST00000587888 CNPY2Q9Y2B0 182 aa16.91■□□□□ 0.3
ERCC1-205ENST00000587888 PATL2C9JE40 543 aaKnown RBP16.9■□□□□ 0.3
ERCC1-205ENST00000587888 ZFYP08048 801 aaPredicted RBP16.9■□□□□ 0.3
ERCC1-205ENST00000587888 ZNF865P0CJ78 1059 aaPredicted RBP16.9■□□□□ 0.3
ERCC1-205ENST00000587888 GNAT2P19087 354 aa16.9■□□□□ 0.3
ERCC1-205ENST00000587888 TLE2Q04725 743 aa16.9■□□□□ 0.3
ERCC1-205ENST00000587888 SNX17Q15036 470 aa16.9■□□□□ 0.3
ERCC1-205ENST00000587888 C9orf50Q5SZB4 431 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms