RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SYTL5Q8TDW5 730 aaPredicted RBP7.21□□□□□ -1.26
VMP1-205ENST00000587470 FITM1A5D6W6 292 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 CLEC3AO75596 197 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 KRT1P04264 644 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 NME1P15531 152 aaKnown RBP7.2□□□□□ -1.26
VMP1-205ENST00000587470 FANCCQ00597 558 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 TEKQ02763 1124 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 NR0B2Q15466 257 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 NBPF9Q3BBW0 867 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 USP48Q86UV5 1035 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 SPPL2CQ8IUH8 684 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 LILRA2Q8N149 483 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 PPP1R16BQ96T49 567 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 ANTXR1Q9H6X2 564 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 SP110Q9HB58 689 aa7.2□□□□□ -1.26
VMP1-205ENST00000587470 MYO15BQ96JP2 1530 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 MEIS3P2A8K0S8 358 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 TNFRSF10CO14798 259 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 DUSP4Q13115 394 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 RNF111Q6ZNA4 994 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 HOMEZQ8IX15 550 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 USHBP1Q8N6Y0 703 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 ZNF655Q8N720 491 aaPredicted RBP7.19□□□□□ -1.26
VMP1-205ENST00000587470 FBXO15Q8NCQ5 510 aaPredicted RBP7.19□□□□□ -1.26
VMP1-205ENST00000587470 DIRC2Q96SL1 478 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 HDAC8Q9BY41 377 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 C19orf44Q9H6X5 657 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 ZNF281Q9Y2X9 895 aa7.19□□□□□ -1.26
VMP1-205ENST00000587470 TRHRP34981 398 aaPredicted RBP7.18□□□□□ -1.26
VMP1-205ENST00000587470 CHRNEQ04844 493 aa7.18□□□□□ -1.26
VMP1-205ENST00000587470 INTS3Q68E01 1043 aaKnown RBP7.18□□□□□ -1.26
VMP1-205ENST00000587470 SYDE1Q6ZW31 735 aaPredicted RBP7.18□□□□□ -1.26
VMP1-205ENST00000587470 RNF34Q969K3 372 aa7.18□□□□□ -1.26
VMP1-205ENST00000587470 NSUN3Q9H649 340 aaKnown RBP7.18□□□□□ -1.26
VMP1-205ENST00000587470 ERCC6Q03468 1493 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 DCAF1Q9Y4B6 1507 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 IMPDH2P12268 514 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 PCBP3P57721 371 aaKnown RBP7.17□□□□□ -1.26
VMP1-205ENST00000587470 SNX17Q15036 470 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 ZNF394Q53GI3 561 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 TMC3Q7Z5M5 1100 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 ANKS4BQ8N8V4 417 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 LINC01599Q8WXQ3 324 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 TCTN2Q96GX1 697 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 RNF32Q9H0A6 362 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 DCP1AQ9NPI6 582 aaPredicted RBP7.17□□□□□ -1.26
VMP1-205ENST00000587470 EBF1Q9UH73 591 aa7.17□□□□□ -1.26
VMP1-205ENST00000587470 SSU72P8A0A1W2PR75 194 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 TSPAN15O95858 294 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 VAMP1P23763 118 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 RAP1GAPP47736 663 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 SNW1Q13573 536 aaKnown RBP7.16□□□□□ -1.26
VMP1-205ENST00000587470 KRTAP19-4Q3LI73 84 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 TMEM192Q8IY95 271 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 LINC00116Q8NCU8 138 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 SLC9A7Q96T83 725 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 PRDM14Q9GZV8 571 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 EPB41L4BQ9H329 900 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 CWC22Q9HCG8 908 aaKnown RBP7.16□□□□□ -1.26
VMP1-205ENST00000587470 TCFL5Q9UL49 500 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 ZNRF3Q9ULT6 936 aa7.16□□□□□ -1.26
VMP1-205ENST00000587470 SCAMP3O14828 347 aaKnown RBP7.15□□□□□ -1.26
VMP1-205ENST00000587470 SIGLEC6O43699 453 aa7.15□□□□□ -1.26
VMP1-205ENST00000587470 RPL10P27635 214 aaKnown RBP7.15□□□□□ -1.26
VMP1-205ENST00000587470 CFPP27918 469 aa7.15□□□□□ -1.26
VMP1-205ENST00000587470 ZNF512BQ96KM6 892 aaPredicted RBP7.15□□□□□ -1.26
VMP1-205ENST00000587470 DHRS1Q96LJ7 313 aa7.15□□□□□ -1.26
VMP1-205ENST00000587470 SLC6A18Q96N87 628 aa7.15□□□□□ -1.26
VMP1-205ENST00000587470 KRTAP4-11Q9BYQ6 195 aa7.15□□□□□ -1.26
VMP1-205ENST00000587470 FOXP3Q9BZS1 431 aa7.15□□□□□ -1.26
VMP1-205ENST00000587470 DDX41Q9UJV9 622 aaKnown RBP7.15□□□□□ -1.26
VMP1-205ENST00000587470 PCDHGB7Q9Y5F8 929 aa7.15□□□□□ -1.26
VMP1-205ENST00000587470 PRAMEF1O95521 474 aa7.14□□□□□ -1.27
VMP1-205ENST00000587470 TIGD5Q53EQ6 642 aa7.14□□□□□ -1.27
VMP1-205ENST00000587470 LCNL1Q6ZST4 164 aa7.14□□□□□ -1.27
VMP1-205ENST00000587470 WAPLQ7Z5K2 1190 aa7.14□□□□□ -1.27
VMP1-205ENST00000587470 G6PC3Q9BUM1 346 aa7.14□□□□□ -1.27
VMP1-205ENST00000587470 MKRN2Q9H000 416 aaKnown RBP7.14□□□□□ -1.27
VMP1-205ENST00000587470 SLC6A17Q9H1V8 727 aa7.14□□□□□ -1.27
VMP1-205ENST00000587470 ZMYM5Q9UJ78 669 aa7.14□□□□□ -1.27
VMP1-205ENST00000587470 NFIBO00712 420 aa7.13□□□□□ -1.27
VMP1-205ENST00000587470 TMEM253P0C7T8 217 aa7.13□□□□□ -1.27
VMP1-205ENST00000587470 RACK1P63244 317 aaKnown RBP7.13□□□□□ -1.27
VMP1-205ENST00000587470 ANKLE2Q86XL3 938 aa7.13□□□□□ -1.27
VMP1-205ENST00000587470 IRF2BP1Q8IU81 584 aa7.13□□□□□ -1.27
VMP1-205ENST00000587470 FERD3LQ96RJ6 166 aa7.13□□□□□ -1.27
VMP1-205ENST00000587470 SLC26A8Q96RN1 970 aa7.13□□□□□ -1.27
VMP1-205ENST00000587470 CHST7Q9NS84 486 aa7.13□□□□□ -1.27
VMP1-205ENST00000587470 FBXL21Q9UKT6 434 aa7.13□□□□□ -1.27
VMP1-205ENST00000587470 YBX2Q9Y2T7 364 aaKnown RBP7.13□□□□□ -1.27
VMP1-205ENST00000587470 PCDHB12Q9Y5F1 795 aa7.13□□□□□ -1.27
VMP1-205ENST00000587470 PSPNO60542 156 aa7.12□□□□□ -1.27
VMP1-205ENST00000587470 RECKO95980 971 aa7.12□□□□□ -1.27
VMP1-205ENST00000587470 SYPP08247 313 aa7.12□□□□□ -1.27
VMP1-205ENST00000587470 ACRP10323 421 aa7.12□□□□□ -1.27
VMP1-205ENST00000587470 KIR2DL1P43626 348 aaPredicted RBP7.12□□□□□ -1.27
VMP1-205ENST00000587470 KIR2DL2P43627 348 aaPredicted RBP7.12□□□□□ -1.27
VMP1-205ENST00000587470 AUHQ13825 339 aaKnown RBP7.12□□□□□ -1.27
VMP1-205ENST00000587470 ZNF654Q8IZM8 581 aa7.12□□□□□ -1.27
VMP1-205ENST00000587470 TAB3Q8N5C8 712 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms