RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 FCER1AP12319 257 aa12.7□□□□□ -0.38
ZNF540-205ENST00000587220 CYP2C19P33261 490 aa12.7□□□□□ -0.38
ZNF540-205ENST00000587220 PDE4BQ07343 736 aa12.7□□□□□ -0.38
ZNF540-205ENST00000587220 HDAC1Q13547 482 aaPredicted RBP12.7□□□□□ -0.38
ZNF540-205ENST00000587220 FAM83BQ5T0W9 1011 aa12.7□□□□□ -0.38
ZNF540-205ENST00000587220 C7orf61Q8IZ16 206 aa12.7□□□□□ -0.38
ZNF540-205ENST00000587220 NPLOC4Q8TAT6 608 aa12.7□□□□□ -0.38
ZNF540-205ENST00000587220 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
ZNF540-205ENST00000587220 FLRT1Q9NZU1 646 aa12.7□□□□□ -0.38
ZNF540-205ENST00000587220 COL11A1P12107 1806 aaPredicted RBP12.69□□□□□ -0.38
ZNF540-205ENST00000587220 RANBP2P49792 3224 aaKnown RBP12.69□□□□□ -0.38
ZNF540-205ENST00000587220 GREB1LQ9C091 1923 aaPredicted RBP12.69□□□□□ -0.38
ZNF540-205ENST00000587220 MSCO60682 206 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 SLC25A27O95847 323 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 TSPY3P0CV98 308 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 TSPY8P0CW00 308 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 AAMPQ13685 434 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 TMEM132BQ14DG7 1078 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 ZMYM1Q5SVZ6 1142 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 ABRAQ8N0Z2 381 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 EVI5LQ96CN4 794 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.69□□□□□ -0.38
ZNF540-205ENST00000587220 NYAP2Q9P242 653 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 RBM27Q9P2N5 1060 aaKnown RBP12.69□□□□□ -0.38
ZNF540-205ENST00000587220 CLIP2Q9UDT6 1046 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 DDX20Q9UHI6 824 aaKnown RBP12.69□□□□□ -0.38
ZNF540-205ENST00000587220 PPP1R9AQ9ULJ8 1098 aa12.69□□□□□ -0.38
ZNF540-205ENST00000587220 ISY1Q9ULR0 285 aaKnown RBP12.69□□□□□ -0.38
ZNF540-205ENST00000587220 CTDP1Q9Y5B0 961 aaPredicted RBP12.69□□□□□ -0.38
ZNF540-205ENST00000587220 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 F5H6K3 240 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 VWA5AO00534 786 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 COPB2P35606 906 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 FXR1P51114 621 aaKnown RBP eCLIP12.68□□□□□ -0.38
ZNF540-205ENST00000587220 KLRC3Q07444 240 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 PPARAQ07869 468 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 KCTD2Q14681 263 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 OLFML2BQ68BL8 750 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 LHX8Q68G74 356 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 MMP19Q99542 508 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 NUP88Q99567 741 aaPredicted RBP12.68□□□□□ -0.38
ZNF540-205ENST00000587220 SLF1Q9BQI6 1058 aa12.68□□□□□ -0.38
ZNF540-205ENST00000587220 DNAH12Q6ZR08 3092 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 ALPK3Q96L96 1907 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 TTLL1O95922 423 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 NDUFB10O96000 172 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 NEFLP07196 543 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 STAT3P40763 770 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 SLC4A3P48751 1232 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-205ENST00000587220 PDE1AP54750 535 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 CCDC129Q6ZRS4 1044 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 PRPF38AQ8NAV1 312 aaKnown RBP12.67□□□□□ -0.38
ZNF540-205ENST00000587220 CEP95Q96GE4 821 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 RWDD1Q9H446 243 aaPredicted RBP12.67□□□□□ -0.38
ZNF540-205ENST00000587220 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
ZNF540-205ENST00000587220 TRIOBPQ9H2D6 2365 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 SALL3Q9BXA9 1300 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 TRIM6-TRIM34B2RNG4 842 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 COBLO75128 1261 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 ZBED4O75132 1171 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
ZNF540-205ENST00000587220 CYBAP13498 195 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 TFAP4Q01664 338 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 ERICH6BQ5W0A0 696 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 SNRNP48Q6IEG0 339 aaKnown RBP12.66□□□□□ -0.38
ZNF540-205ENST00000587220 B4GALNT3Q6L9W6 998 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 RIOX2Q8IUF8 465 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 LRRC47Q8N1G4 583 aaKnown RBP12.66□□□□□ -0.38
ZNF540-205ENST00000587220 KIFC2Q96AC6 838 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 MAML3Q96JK9 1138 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 LNPKQ9C0E8 428 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 MTMR4Q9NYA4 1195 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 STAP2Q9UGK3 403 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
ZNF540-205ENST00000587220 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
ZNF540-205ENST00000587220 SYNPO2Q9UMS6 1093 aa12.66□□□□□ -0.38
ZNF540-205ENST00000587220 PFASO15067 1338 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 IGKV6D-41A0A0C4DH26 115 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 TSPY2A6NKD2 308 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 PGK2P07205 417 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 IKQ13123 557 aaPredicted RBP12.65□□□□□ -0.38
ZNF540-205ENST00000587220 PPP4R3BQ5MIZ7 849 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 CPXCR1Q8N123 301 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 ARRDC4Q8NCT1 418 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 GMCL1P1Q8NEA9 526 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 TRPV1Q8NER1 839 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 NEDD1Q8NHV4 660 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 SENP6Q9GZR1 1112 aaPredicted RBP12.65□□□□□ -0.38
ZNF540-205ENST00000587220 HELLSQ9NRZ9 838 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 FEM1BQ9UK73 627 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
ZNF540-205ENST00000587220 ZNFX1Q9P2E3 1918 aaKnown RBP12.64□□□□□ -0.39
ZNF540-205ENST00000587220 PLXNA1Q9UIW2 1896 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 KBTBD13C9JR72 458 aa12.64□□□□□ -0.39
ZNF540-205ENST00000587220 DNM1LO00429 736 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms