RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ATN1P54259 1190 aaPredicted RBP23.24■■□□□ 1.31
TRAF4-216ENST00000586813 MDM2Q00987 491 aaPredicted RBP23.24■■□□□ 1.31
TRAF4-216ENST00000586813 ECHDC1Q9NTX5 307 aa23.24■■□□□ 1.31
TRAF4-216ENST00000586813 SEPT4O43236 478 aa23.23■■□□□ 1.31
TRAF4-216ENST00000586813 SLC25A27O95847 323 aa23.23■■□□□ 1.31
TRAF4-216ENST00000586813 FCER1AP12319 257 aa23.23■■□□□ 1.31
TRAF4-216ENST00000586813 GJC2Q5T442 439 aaPredicted RBP23.23■■□□□ 1.31
TRAF4-216ENST00000586813 MAML3Q96JK9 1138 aa23.23■■□□□ 1.31
TRAF4-216ENST00000586813 STRBPQ96SI9 672 aaKnown RBP23.23■■□□□ 1.31
TRAF4-216ENST00000586813 GOPCQ9HD26 462 aa23.23■■□□□ 1.31
TRAF4-216ENST00000586813 FBXO28Q9NVF7 368 aa23.23■■□□□ 1.31
TRAF4-216ENST00000586813 ADAMTS5Q9UNA0 930 aa23.23■■□□□ 1.31
TRAF4-216ENST00000586813 ANO1Q5XXA6 986 aa23.22■■□□□ 1.31
TRAF4-216ENST00000586813 ARRDC4Q8NCT1 418 aa23.22■■□□□ 1.31
TRAF4-216ENST00000586813 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.22■■□□□ 1.31
TRAF4-216ENST00000586813 ROBO3Q96MS0 1386 aa23.22■■□□□ 1.31
TRAF4-216ENST00000586813 RTP1P59025 263 aa23.21■■□□□ 1.31
TRAF4-216ENST00000586813 DEFB123Q8N688 67 aa23.21■■□□□ 1.31
TRAF4-216ENST00000586813 KBTBD3Q8NAB2 608 aa23.21■■□□□ 1.31
TRAF4-216ENST00000586813 PPP1R9AQ9ULJ8 1098 aa23.21■■□□□ 1.31
TRAF4-216ENST00000586813 SMCHD1A6NHR9 2005 aa23.21■■□□□ 1.31
TRAF4-216ENST00000586813 KBTBD13C9JR72 458 aa23.2■■□□□ 1.3
TRAF4-216ENST00000586813 SBK1Q52WX2 424 aa23.2■■□□□ 1.3
TRAF4-216ENST00000586813 FAM83BQ5T0W9 1011 aa23.2■■□□□ 1.3
TRAF4-216ENST00000586813 RIOX2Q8IUF8 465 aa23.2■■□□□ 1.3
TRAF4-216ENST00000586813 GPATCH3Q96I76 525 aa23.2■■□□□ 1.3
TRAF4-216ENST00000586813 MMP19Q99542 508 aa23.2■■□□□ 1.3
TRAF4-216ENST00000586813 GSG1L2A8MUP6 293 aa23.19■■□□□ 1.3
TRAF4-216ENST00000586813 VWA5AO00534 786 aa23.19■■□□□ 1.3
TRAF4-216ENST00000586813 RAD21O60216 631 aa23.19■■□□□ 1.3
TRAF4-216ENST00000586813 PRAMEF19Q5SWL8 479 aa23.19■■□□□ 1.3
TRAF4-216ENST00000586813 TSHZ3Q63HK5 1081 aa23.19■■□□□ 1.3
TRAF4-216ENST00000586813 GIMAP6Q6P9H5 292 aa23.19■■□□□ 1.3
TRAF4-216ENST00000586813 Q7L0L9 218 aa23.19■■□□□ 1.3
TRAF4-216ENST00000586813 APPBP2Q92624 585 aa23.19■■□□□ 1.3
TRAF4-216ENST00000586813 OSBP2Q969R2 916 aa23.19■■□□□ 1.3
TRAF4-216ENST00000586813 LBHD1Q9BQE6 289 aaPredicted RBP23.19■■□□□ 1.3
TRAF4-216ENST00000586813 ZNF214Q9UL59 606 aaPredicted RBP23.19■■□□□ 1.3
TRAF4-216ENST00000586813 MYCNP04198 464 aaPredicted RBP23.18■■□□□ 1.3
TRAF4-216ENST00000586813 RASA1P20936 1047 aa23.18■■□□□ 1.3
TRAF4-216ENST00000586813 REPS2Q8NFH8 660 aa23.18■■□□□ 1.3
TRAF4-216ENST00000586813 DCTPP1Q9H773 170 aa23.18■■□□□ 1.3
TRAF4-216ENST00000586813 PRKAG2Q9UGJ0 569 aa23.18■■□□□ 1.3
TRAF4-216ENST00000586813 LAMA2P24043 3122 aaKnown RBP23.17■■□□□ 1.3
TRAF4-216ENST00000586813 MINDY4BA8MYZ0 360 aa23.17■■□□□ 1.3
TRAF4-216ENST00000586813 PGK2P07205 417 aa23.17■■□□□ 1.3
TRAF4-216ENST00000586813 COPB2P35606 906 aa23.17■■□□□ 1.3
TRAF4-216ENST00000586813 STAT3P40763 770 aa23.17■■□□□ 1.3
TRAF4-216ENST00000586813 KCTD2Q14681 263 aa23.17■■□□□ 1.3
TRAF4-216ENST00000586813 FAM47AQ5JRC9 791 aa23.17■■□□□ 1.3
TRAF4-216ENST00000586813 SLC39A5Q6ZMH5 540 aa23.17■■□□□ 1.3
TRAF4-216ENST00000586813 STK11IPQ8N1F8 1099 aa23.17■■□□□ 1.3
TRAF4-216ENST00000586813 MKNK2Q9HBH9 465 aa23.17■■□□□ 1.3
TRAF4-216ENST00000586813 ATP11BQ9Y2G3 1177 aa23.17■■□□□ 1.3
TRAF4-216ENST00000586813 RNF113AO15541 343 aaKnown RBP23.16■■□□□ 1.3
TRAF4-216ENST00000586813 SNX17Q15036 470 aa23.16■■□□□ 1.3
TRAF4-216ENST00000586813 LRRC41Q15345 812 aa23.16■■□□□ 1.3
TRAF4-216ENST00000586813 SLC17A8Q8NDX2 589 aa23.16■■□□□ 1.3
TRAF4-216ENST00000586813 NUP88Q99567 741 aaPredicted RBP23.16■■□□□ 1.3
TRAF4-216ENST00000586813 EPB41L4AQ9HCS5 686 aaPredicted RBP23.16■■□□□ 1.3
TRAF4-216ENST00000586813 NRBP1Q9UHY1 535 aa23.16■■□□□ 1.3
TRAF4-216ENST00000586813 GPAA1O43292 621 aa23.15■■□□□ 1.3
TRAF4-216ENST00000586813 ZFYP08048 801 aaPredicted RBP23.15■■□□□ 1.3
TRAF4-216ENST00000586813 ZNF792Q3KQV3 632 aa23.15■■□□□ 1.3
TRAF4-216ENST00000586813 SLF1Q9BQI6 1058 aa23.15■■□□□ 1.3
TRAF4-216ENST00000586813 TINF2Q9BSI4 451 aa23.15■■□□□ 1.3
TRAF4-216ENST00000586813 NYAP2Q9P242 653 aa23.15■■□□□ 1.3
TRAF4-216ENST00000586813 DIS3Q9Y2L1 958 aaKnown RBP23.15■■□□□ 1.3
TRAF4-216ENST00000586813 NDUFB10O96000 172 aa23.14■■□□□ 1.29
TRAF4-216ENST00000586813 GNAT2P19087 354 aa23.14■■□□□ 1.29
TRAF4-216ENST00000586813 TRIM60Q495X7 471 aa23.14■■□□□ 1.29
TRAF4-216ENST00000586813 TEX13BQ9BXU2 312 aa23.14■■□□□ 1.29
TRAF4-216ENST00000586813 XPNPEP3Q9NQH7 507 aa23.14■■□□□ 1.29
TRAF4-216ENST00000586813 MTMR10Q9NXD2 777 aa23.14■■□□□ 1.29
TRAF4-216ENST00000586813 F5H6K3 240 aa23.13■■□□□ 1.29
TRAF4-216ENST00000586813 M0R2C6 588 aa23.13■■□□□ 1.29
TRAF4-216ENST00000586813 RARBP10826 455 aa23.13■■□□□ 1.29
TRAF4-216ENST00000586813 ADCYAP1R1P41586 468 aa23.13■■□□□ 1.29
TRAF4-216ENST00000586813 TDO2P48775 406 aa23.13■■□□□ 1.29
TRAF4-216ENST00000586813 KLRC3Q07444 240 aa23.13■■□□□ 1.29
TRAF4-216ENST00000586813 PRDM5Q9NQX1 630 aaPredicted RBP23.13■■□□□ 1.29
TRAF4-216ENST00000586813 IGKV6D-41A0A0C4DH26 115 aa23.12■■□□□ 1.29
TRAF4-216ENST00000586813 SNRNP48Q6IEG0 339 aaKnown RBP23.12■■□□□ 1.29
TRAF4-216ENST00000586813 FERMT2Q96AC1 680 aa23.12■■□□□ 1.29
TRAF4-216ENST00000586813 STXBP5LQ9Y2K9 1186 aa23.12■■□□□ 1.29
TRAF4-216ENST00000586813 MCM3APO60318 1980 aa23.11■■□□□ 1.29
TRAF4-216ENST00000586813 TAL1P17542 331 aaPredicted RBP23.11■■□□□ 1.29
TRAF4-216ENST00000586813 C1orf53Q5VUE5 145 aa23.11■■□□□ 1.29
TRAF4-216ENST00000586813 ZNF287Q9HBT7 754 aa23.11■■□□□ 1.29
TRAF4-216ENST00000586813 CLIP2Q9UDT6 1046 aa23.11■■□□□ 1.29
TRAF4-216ENST00000586813 PHF24Q9UPV7 400 aa23.11■■□□□ 1.29
TRAF4-216ENST00000586813 TTC41PQ6P2S7 1318 aa23.1■■□□□ 1.29
TRAF4-216ENST00000586813 PRDM1O75626 825 aa23.1■■□□□ 1.29
TRAF4-216ENST00000586813 APPP05067 770 aa23.1■■□□□ 1.29
TRAF4-216ENST00000586813 ZNF865P0CJ78 1059 aaPredicted RBP23.1■■□□□ 1.29
TRAF4-216ENST00000586813 LRRFIP1Q32MZ4 808 aaKnown RBP23.1■■□□□ 1.29
TRAF4-216ENST00000586813 PRPF38AQ8NAV1 312 aaKnown RBP23.1■■□□□ 1.29
TRAF4-216ENST00000586813 CEP95Q96GE4 821 aa23.1■■□□□ 1.29
TRAF4-216ENST00000586813 PDLIM7Q9NR12 457 aa23.1■■□□□ 1.29
TRAF4-216ENST00000586813 PLIN4Q96Q06 1357 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms