RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 PCDH10Q9P2E7 1040 aa20.24■□□□□ 0.83
TRIM47-203ENST00000586495 SALL3Q9BXA9 1300 aa20.24■□□□□ 0.83
TRIM47-203ENST00000586495 RLFQ13129 1914 aa20.23■□□□□ 0.83
TRIM47-203ENST00000586495 PDE4BQ07343 736 aa20.23■□□□□ 0.83
TRIM47-203ENST00000586495 FAM83BQ5T0W9 1011 aa20.23■□□□□ 0.83
TRIM47-203ENST00000586495 OLFML2BQ68BL8 750 aa20.23■□□□□ 0.83
TRIM47-203ENST00000586495 LHX8Q68G74 356 aa20.23■□□□□ 0.83
TRIM47-203ENST00000586495 PPP1R9AQ9ULJ8 1098 aa20.23■□□□□ 0.83
TRIM47-203ENST00000586495 ADAMTS5Q9UNA0 930 aa20.23■□□□□ 0.83
TRIM47-203ENST00000586495 MNX1P50219 401 aaPredicted RBP20.22■□□□□ 0.83
TRIM47-203ENST00000586495 TMEM132BQ14DG7 1078 aa20.22■□□□□ 0.83
TRIM47-203ENST00000586495 EVI5LQ96CN4 794 aa20.22■□□□□ 0.83
TRIM47-203ENST00000586495 FBXO28Q9NVF7 368 aa20.22■□□□□ 0.83
TRIM47-203ENST00000586495 CLIP2Q9UDT6 1046 aa20.22■□□□□ 0.83
TRIM47-203ENST00000586495 STAP2Q9UGK3 403 aa20.22■□□□□ 0.83
TRIM47-203ENST00000586495 CEP290O15078 2479 aa20.22■□□□□ 0.83
TRIM47-203ENST00000586495 A0A0G2JMZ2 1700 aa20.22■□□□□ 0.83
TRIM47-203ENST00000586495 F5H6K3 240 aa20.21■□□□□ 0.83
TRIM47-203ENST00000586495 VWA5AO00534 786 aa20.21■□□□□ 0.83
TRIM47-203ENST00000586495 PRDM1O75626 825 aa20.21■□□□□ 0.83
TRIM47-203ENST00000586495 FCER1AP12319 257 aa20.21■□□□□ 0.83
TRIM47-203ENST00000586495 CNGA1P29973 690 aa20.21■□□□□ 0.83
TRIM47-203ENST00000586495 CYP2C19P33261 490 aa20.21■□□□□ 0.83
TRIM47-203ENST00000586495 COPB2P35606 906 aa20.21■□□□□ 0.83
TRIM47-203ENST00000586495 KLRC3Q07444 240 aa20.21■□□□□ 0.83
TRIM47-203ENST00000586495 DDX20Q9UHI6 824 aaKnown RBP20.21■□□□□ 0.83
TRIM47-203ENST00000586495 SYNPO2Q9UMS6 1093 aa20.21■□□□□ 0.83
TRIM47-203ENST00000586495 GREB1LQ9C091 1923 aaPredicted RBP20.2■□□□□ 0.82
TRIM47-203ENST00000586495 IGKV6D-41A0A0C4DH26 115 aa20.2■□□□□ 0.82
TRIM47-203ENST00000586495 STAT3P40763 770 aa20.2■□□□□ 0.82
TRIM47-203ENST00000586495 FXR1P51114 621 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRIM47-203ENST00000586495 PDE1AP54750 535 aa20.2■□□□□ 0.82
TRIM47-203ENST00000586495 RIOX2Q8IUF8 465 aa20.2■□□□□ 0.82
TRIM47-203ENST00000586495 MKL1Q969V6 931 aa20.2■□□□□ 0.82
TRIM47-203ENST00000586495 RBM27Q9P2N5 1060 aaKnown RBP20.2■□□□□ 0.82
TRIM47-203ENST00000586495 ZNF236Q9UL36 1845 aa20.2■□□□□ 0.82
TRIM47-203ENST00000586495 COBLO75128 1261 aa20.19■□□□□ 0.82
TRIM47-203ENST00000586495 TTLL1O95922 423 aa20.19■□□□□ 0.82
TRIM47-203ENST00000586495 TSPY3P0CV98 308 aa20.19■□□□□ 0.82
TRIM47-203ENST00000586495 TSPY8P0CW00 308 aa20.19■□□□□ 0.82
TRIM47-203ENST00000586495 PPARAQ07869 468 aa20.19■□□□□ 0.82
TRIM47-203ENST00000586495 C7orf61Q8IZ16 206 aa20.19■□□□□ 0.82
TRIM47-203ENST00000586495 NEDD1Q8NHV4 660 aa20.19■□□□□ 0.82
TRIM47-203ENST00000586495 MMP19Q99542 508 aa20.19■□□□□ 0.82
TRIM47-203ENST00000586495 SLF1Q9BQI6 1058 aa20.19■□□□□ 0.82
TRIM47-203ENST00000586495 RWDD1Q9H446 243 aaPredicted RBP20.19■□□□□ 0.82
TRIM47-203ENST00000586495 MTMR4Q9NYA4 1195 aa20.19■□□□□ 0.82
TRIM47-203ENST00000586495 NDUFB10O96000 172 aa20.18■□□□□ 0.82
TRIM47-203ENST00000586495 IGHA2P01877 340 aa20.18■□□□□ 0.82
TRIM47-203ENST00000586495 CYBAP13498 195 aa20.18■□□□□ 0.82
TRIM47-203ENST00000586495 KCTD2Q14681 263 aa20.18■□□□□ 0.82
TRIM47-203ENST00000586495 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
TRIM47-203ENST00000586495 TICAM2Q86XR7 235 aa20.18■□□□□ 0.82
TRIM47-203ENST00000586495 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
TRIM47-203ENST00000586495 CEP95Q96GE4 821 aa20.18■□□□□ 0.82
TRIM47-203ENST00000586495 ZNF214Q9UL59 606 aaPredicted RBP20.18■□□□□ 0.82
TRIM47-203ENST00000586495 CTDP1Q9Y5B0 961 aaPredicted RBP20.18■□□□□ 0.82
TRIM47-203ENST00000586495 PARP14Q460N5 1801 aa20.18■□□□□ 0.82
TRIM47-203ENST00000586495 COL6A1P12109 1028 aa20.17■□□□□ 0.82
TRIM47-203ENST00000586495 REPS2Q8NFH8 660 aa20.17■□□□□ 0.82
TRIM47-203ENST00000586495 MAML3Q96JK9 1138 aa20.17■□□□□ 0.82
TRIM47-203ENST00000586495 NUP88Q99567 741 aaPredicted RBP20.17■□□□□ 0.82
TRIM47-203ENST00000586495 HELLSQ9NRZ9 838 aa20.17■□□□□ 0.82
TRIM47-203ENST00000586495 PFASO15067 1338 aa20.17■□□□□ 0.82
TRIM47-203ENST00000586495 ZBED4O75132 1171 aa20.16■□□□□ 0.82
TRIM47-203ENST00000586495 TFAP4Q01664 338 aa20.16■□□□□ 0.82
TRIM47-203ENST00000586495 CCDC129Q6ZRS4 1044 aa20.16■□□□□ 0.82
TRIM47-203ENST00000586495 GMCL1P1Q8NEA9 526 aa20.16■□□□□ 0.82
TRIM47-203ENST00000586495 TRPV1Q8NER1 839 aa20.16■□□□□ 0.82
TRIM47-203ENST00000586495 TEX13BQ9BXU2 312 aa20.16■□□□□ 0.82
TRIM47-203ENST00000586495 PRO3102Q9H379 93 aa20.16■□□□□ 0.82
TRIM47-203ENST00000586495 FEM1BQ9UK73 627 aa20.16■□□□□ 0.82
TRIM47-203ENST00000586495 PLIN4Q96Q06 1357 aa20.16■□□□□ 0.82
TRIM47-203ENST00000586495 A0A1W2PPC1 479 aa20.15■□□□□ 0.82
TRIM47-203ENST00000586495 SEPT4O43236 478 aa20.15■□□□□ 0.82
TRIM47-203ENST00000586495 FAM47AQ5JRC9 791 aa20.15■□□□□ 0.82
TRIM47-203ENST00000586495 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
TRIM47-203ENST00000586495 DIS3Q9Y2L1 958 aaKnown RBP20.15■□□□□ 0.82
TRIM47-203ENST00000586495 ALPK3Q96L96 1907 aa20.15■□□□□ 0.82
TRIM47-203ENST00000586495 COL11A1P12107 1806 aaPredicted RBP20.14■□□□□ 0.81
TRIM47-203ENST00000586495 TSPY2A6NKD2 308 aa20.14■□□□□ 0.81
TRIM47-203ENST00000586495 MCMDC2Q4G0Z9 681 aa20.14■□□□□ 0.81
TRIM47-203ENST00000586495 SNRNP48Q6IEG0 339 aaKnown RBP20.14■□□□□ 0.81
TRIM47-203ENST00000586495 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
TRIM47-203ENST00000586495 LRRC47Q8N1G4 583 aaKnown RBP20.14■□□□□ 0.81
TRIM47-203ENST00000586495 ARRDC4Q8NCT1 418 aa20.14■□□□□ 0.81
TRIM47-203ENST00000586495 SENP6Q9GZR1 1112 aaPredicted RBP20.14■□□□□ 0.81
TRIM47-203ENST00000586495 NRBP1Q9UHY1 535 aa20.14■□□□□ 0.81
TRIM47-203ENST00000586495 ZMYND8Q9ULU4 1186 aaPredicted RBP20.14■□□□□ 0.81
TRIM47-203ENST00000586495 MYH4Q9Y623 1939 aa20.14■□□□□ 0.81
TRIM47-203ENST00000586495 TRIM6-TRIM34B2RNG4 842 aa20.13■□□□□ 0.81
TRIM47-203ENST00000586495 DNM1LO00429 736 aa20.13■□□□□ 0.81
TRIM47-203ENST00000586495 ATP2A1O14983 1001 aa20.13■□□□□ 0.81
TRIM47-203ENST00000586495 PGK2P07205 417 aa20.13■□□□□ 0.81
TRIM47-203ENST00000586495 BMP3P12645 472 aa20.13■□□□□ 0.81
TRIM47-203ENST00000586495 CTDSPL2Q05D32 466 aa20.13■□□□□ 0.81
TRIM47-203ENST00000586495 ALX1Q15699 326 aa20.13■□□□□ 0.81
TRIM47-203ENST00000586495 SLFN13Q68D06 897 aa20.13■□□□□ 0.81
TRIM47-203ENST00000586495 KIFC2Q96AC6 838 aa20.13■□□□□ 0.81
TRIM47-203ENST00000586495 ANAPC4Q9UJX5 808 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms