RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 SHISA4Q96DD7 197 aa23.63■■□□□ 1.37
ATG4D-204ENST00000586417 MMP1P03956 469 aa23.62■■□□□ 1.37
ATG4D-204ENST00000586417 YY1P25490 414 aa23.62■■□□□ 1.37
ATG4D-204ENST00000586417 U2AF2P26368 475 aaKnown RBP eCLIP23.62■■□□□ 1.37
ATG4D-204ENST00000586417 ZNF445P59923 1031 aa23.62■■□□□ 1.37
ATG4D-204ENST00000586417 TAOK2Q9UL54 1235 aa23.62■■□□□ 1.37
ATG4D-204ENST00000586417 V9GY48 417 aaPredicted RBP23.62■■□□□ 1.37
ATG4D-204ENST00000586417 MPHOSPH10O00566 681 aaKnown RBP23.61■■□□□ 1.37
ATG4D-204ENST00000586417 CLEC10AQ8IUN9 316 aa23.61■■□□□ 1.37
ATG4D-204ENST00000586417 PGBD1Q96JS3 809 aa23.61■■□□□ 1.37
ATG4D-204ENST00000586417 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.61■■□□□ 1.37
ATG4D-204ENST00000586417 MAD2L2Q9UI95 211 aa23.61■■□□□ 1.37
ATG4D-204ENST00000586417 TOP1P11387 765 aaKnown RBP23.6■■□□□ 1.37
ATG4D-204ENST00000586417 AKAP17AQ02040 695 aaKnown RBP23.6■■□□□ 1.37
ATG4D-204ENST00000586417 CEBPZQ03701 1054 aaKnown RBP23.6■■□□□ 1.37
ATG4D-204ENST00000586417 DCAF15Q66K64 600 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 MTMR4Q9NYA4 1195 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 RTEL1Q9NZ71 1219 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 KCNJ14Q9UNX9 436 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 hCG_1642624A0A1W2PR95 340 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 USP2O75604 605 aaPredicted RBP23.6■■□□□ 1.37
ATG4D-204ENST00000586417 INPP5BP32019 993 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 ABCB5Q2M3G0 1257 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 CHADLQ6NUI6 762 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 GAS2L3Q86XJ1 694 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 STAG2Q8N3U4 1231 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 HOOK2Q96ED9 719 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 CCDC17Q96LX7 622 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 ZNF341Q9BYN7 854 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 ATAD5Q96QE3 1844 aa23.6■■□□□ 1.37
ATG4D-204ENST00000586417 GH2P01242 217 aa23.59■■□□□ 1.37
ATG4D-204ENST00000586417 CAP2P40123 477 aa23.59■■□□□ 1.37
ATG4D-204ENST00000586417 MOB2Q70IA6 237 aa23.59■■□□□ 1.37
ATG4D-204ENST00000586417 PALM3A6NDB9 673 aaPredicted RBP23.58■■□□□ 1.37
ATG4D-204ENST00000586417 ITGBL1O95965 494 aaPredicted RBP23.58■■□□□ 1.37
ATG4D-204ENST00000586417 TPRNQ4KMQ1 711 aa23.58■■□□□ 1.37
ATG4D-204ENST00000586417 ZKSCAN4Q969J2 545 aaPredicted RBP23.58■■□□□ 1.37
ATG4D-204ENST00000586417 KLRG1Q96E93 195 aa23.58■■□□□ 1.37
ATG4D-204ENST00000586417 WRNIP1Q96S55 665 aa23.58■■□□□ 1.37
ATG4D-204ENST00000586417 ZNF112Q9UJU3 913 aa23.58■■□□□ 1.37
ATG4D-204ENST00000586417 SEPT2Q15019 361 aa23.57■■□□□ 1.36
ATG4D-204ENST00000586417 SLC35G1Q2M3R5 365 aa23.57■■□□□ 1.36
ATG4D-204ENST00000586417 DIS3L2Q8IYB7 885 aaKnown RBP23.57■■□□□ 1.36
ATG4D-204ENST00000586417 SYAP1Q96A49 352 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-204ENST00000586417 ZNF408Q9H9D4 720 aa23.57■■□□□ 1.36
ATG4D-204ENST00000586417 POLR3EQ9NVU0 708 aa23.57■■□□□ 1.36
ATG4D-204ENST00000586417 GOLGA6L3A6NEY3 463 aa23.57■■□□□ 1.36
ATG4D-204ENST00000586417 BTBD18B2RXH4 712 aa23.57■■□□□ 1.36
ATG4D-204ENST00000586417 NASPP49321 788 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-204ENST00000586417 GNAQP50148 359 aa23.57■■□□□ 1.36
ATG4D-204ENST00000586417 RASGRP2Q7LDG7 609 aa23.57■■□□□ 1.36
ATG4D-204ENST00000586417 ZNF784Q8NCA9 323 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-204ENST00000586417 VPS54Q9P1Q0 977 aa23.57■■□□□ 1.36
ATG4D-204ENST00000586417 BAZ2BQ9UIF8 2168 aaKnown RBP23.57■■□□□ 1.36
ATG4D-204ENST00000586417 ISY1Q9ULR0 285 aaKnown RBP23.57■■□□□ 1.36
ATG4D-204ENST00000586417 CLIC4Q9Y696 253 aa23.57■■□□□ 1.36
ATG4D-204ENST00000586417 OTOFQ9HC10 1997 aa23.56■■□□□ 1.36
ATG4D-204ENST00000586417 CCDC84Q86UT8 332 aaPredicted RBP23.56■■□□□ 1.36
ATG4D-204ENST00000586417 PHF20Q9BVI0 1012 aa23.56■■□□□ 1.36
ATG4D-204ENST00000586417 FOXP1Q9H334 677 aaPredicted RBP23.56■■□□□ 1.36
ATG4D-204ENST00000586417 ZBTB21Q9ULJ3 1066 aa23.56■■□□□ 1.36
ATG4D-204ENST00000586417 PAPPA2Q9BXP8 1791 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 YEATS4O95619 227 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 NF2P35240 595 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 GNL2Q13823 731 aaKnown RBP23.55■■□□□ 1.36
ATG4D-204ENST00000586417 SAFBQ15424 915 aaKnown RBP eCLIP23.55■■□□□ 1.36
ATG4D-204ENST00000586417 PFKFB3Q16875 520 aaPredicted RBP23.55■■□□□ 1.36
ATG4D-204ENST00000586417 TMEM179Q6ZVK1 233 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 NOSTRINQ8IVI9 506 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 LINC00301Q8NCQ3 95 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 PPP1R12BO60237 982 aaPredicted RBP23.55■■□□□ 1.36
ATG4D-204ENST00000586417 CTNND1O60716 968 aaKnown RBP23.55■■□□□ 1.36
ATG4D-204ENST00000586417 SCG2P13521 617 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 XBP1P17861 261 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 LIG1P18858 919 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 CCDC183Q5T5S1 534 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 SIAH1Q8IUQ4 282 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.55■■□□□ 1.361e-19■□□□□ 9.9
ATG4D-204ENST00000586417 CABP5Q9NP86 173 aa23.55■■□□□ 1.36
ATG4D-204ENST00000586417 DOCK1Q14185 1865 aa23.54■■□□□ 1.36
ATG4D-204ENST00000586417 MYH4Q9Y623 1939 aa23.54■■□□□ 1.36
ATG4D-204ENST00000586417 SYCE3A1L190 88 aa23.54■■□□□ 1.36
ATG4D-204ENST00000586417 GOLGA6L4A6NEF3 574 aa23.54■■□□□ 1.36
ATG4D-204ENST00000586417 CYTH3O43739 400 aa23.54■■□□□ 1.36
ATG4D-204ENST00000586417 ANO1Q5XXA6 986 aa23.54■■□□□ 1.36
ATG4D-204ENST00000586417 OXER1Q8TDS5 423 aa23.54■■□□□ 1.36
ATG4D-204ENST00000586417 MTMR7Q9Y216 660 aa23.54■■□□□ 1.36
ATG4D-204ENST00000586417 TTLL1O95922 423 aa23.53■■□□□ 1.36
ATG4D-204ENST00000586417 TTLL12Q14166 644 aaPredicted RBP23.53■■□□□ 1.36
ATG4D-204ENST00000586417 NPY5RQ15761 445 aa23.53■■□□□ 1.36
ATG4D-204ENST00000586417 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.53■■□□□ 1.36
ATG4D-204ENST00000586417 LZTS2Q9BRK4 669 aa23.53■■□□□ 1.36
ATG4D-204ENST00000586417 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.53■■□□□ 1.36
ATG4D-204ENST00000586417 GOLGA8HP0CJ92 632 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 NR5A1Q13285 461 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 KLRF2D3W0D1 207 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 CELF2O95319 508 aaKnown RBP23.52■■□□□ 1.36
ATG4D-204ENST00000586417 ASNSP08243 561 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 PARP1P09874 1014 aaKnown RBP23.52■■□□□ 1.36
ATG4D-204ENST00000586417 SNHG28P0DPA3 235 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms