RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 ANKRD13CQ8N6S4 541 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 ENAHQ8N8S7 591 aaPredicted RBP13.67□□□□□ -0.22
LRFN3-202ENST00000585876 NCOA7Q8NI08 942 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 CD99L2Q8TCZ2 262 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 ZSCAN10Q96SZ4 725 aaPredicted RBP13.67□□□□□ -0.22
LRFN3-202ENST00000585876 TMEM47Q9BQJ4 181 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 MTA3Q9BTC8 594 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 TXNRD2Q9NNW7 524 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 RBPJLQ9UBG7 517 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 PPP1R9AQ9ULJ8 1098 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 PLXNA1Q9UIW2 1896 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 CNMDO75829 334 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 FLOT1O75955 427 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 CTGFP29279 349 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 DSG3P32926 999 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 ERVK-9P63128 1117 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 ERVK-24P63145 666 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 KIF22Q14807 665 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 SEC23AQ15436 765 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 SLFN13Q68D06 897 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 CYB5R4Q7L1T6 521 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 OTOP1Q7RTM1 612 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 RALYLQ86SE5 291 aaKnown RBP13.66□□□□□ -0.22
LRFN3-202ENST00000585876 GPRC5AQ8NFJ5 357 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 DCAF4Q8WV16 495 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 TRIM47Q96LD4 638 aa13.66□□□□□ -0.22
LRFN3-202ENST00000585876 BRCA2P51587 3418 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 BMP3P12645 472 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 HSPA4P34932 840 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 PRMT2P55345 433 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 ANTXR2P58335 489 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 REPS2Q8NFH8 660 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 NUP88Q99567 741 aaPredicted RBP13.65□□□□□ -0.22
LRFN3-202ENST00000585876 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 ZKSCAN3Q9BRR0 538 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 UBAC1Q9BSL1 405 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 ARHGAP39Q9C0H5 1083 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 EFCC1Q9HA90 598 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 FBXO28Q9NVF7 368 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 FEM1BQ9UK73 627 aa13.65□□□□□ -0.22
LRFN3-202ENST00000585876 WDR19Q8NEZ3 1342 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 SMCHD1A6NHR9 2005 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 VWA5AO00534 786 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 PDHBP11177 359 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 SLC1A4P43007 532 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 PSMC4P43686 418 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 STAT2P52630 851 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 FCGRTP55899 365 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 KRT32Q14532 448 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 PRPF38AQ8NAV1 312 aaKnown RBP13.64□□□□□ -0.23
LRFN3-202ENST00000585876 PNMA1Q8ND90 353 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 ATG4CQ96DT6 458 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 BTBD7Q9P203 1132 aa13.64□□□□□ -0.23
LRFN3-202ENST00000585876 ZNF214Q9UL59 606 aaPredicted RBP13.64□□□□□ -0.23
LRFN3-202ENST00000585876 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 EIF5BO60841 1220 aaKnown RBP13.63□□□□□ -0.23
LRFN3-202ENST00000585876 FDX1P10109 184 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 ZKSCAN1P17029 563 aaPredicted RBP13.63□□□□□ -0.23
LRFN3-202ENST00000585876 MCCP23508 829 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 MAPK4P31152 587 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 MCM5P33992 734 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 CCNA1P78396 465 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 SART3Q15020 963 aaKnown RBP13.63□□□□□ -0.23
LRFN3-202ENST00000585876 FBXO46Q6PJ61 603 aaPredicted RBP13.63□□□□□ -0.23
LRFN3-202ENST00000585876 BTNL9Q6UXG8 535 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 FAM160B2Q86V87 743 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 SHCBP1Q8NEM2 672 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 MCOLN1Q9GZU1 580 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 SLC38A10Q9HBR0 1119 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
LRFN3-202ENST00000585876 TRIM17Q9Y577 477 aa13.63□□□□□ -0.23
LRFN3-202ENST00000585876 RAD21O60216 631 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 OAZ1P54368 228 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 ZNF543Q08ER8 600 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 COL9A3Q14050 684 aaPredicted RBP13.62□□□□□ -0.23
LRFN3-202ENST00000585876 GPATCH4Q5T3I0 446 aaKnown RBP13.62□□□□□ -0.23
LRFN3-202ENST00000585876 IFIT1BQ5T764 474 aaKnown RBP13.62□□□□□ -0.23
LRFN3-202ENST00000585876 RASGRP2Q7LDG7 609 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 IGDCC4Q8TDY8 1250 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 CHURC1Q8WUH1 139 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 TMEM87BQ96K49 555 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 PAGR1Q9BTK6 254 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 USP26Q9BXU7 913 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 SPATC1LQ9H0A9 340 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 KAT14Q9H8E8 782 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 SRRDQ9UH36 339 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 PTPN22Q9Y2R2 807 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 LCTP09848 1927 aa13.62□□□□□ -0.23
LRFN3-202ENST00000585876 TMEM232C9JQI7 657 aa13.61□□□□□ -0.23
LRFN3-202ENST00000585876 TNPO2O14787 897 aaKnown RBP13.61□□□□□ -0.23
LRFN3-202ENST00000585876 PRC1O43663 620 aa13.61□□□□□ -0.23
LRFN3-202ENST00000585876 PEX10O60683 326 aa13.61□□□□□ -0.23
LRFN3-202ENST00000585876 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
LRFN3-202ENST00000585876 IRF5Q13568 498 aa13.61□□□□□ -0.23
LRFN3-202ENST00000585876 TMEM132BQ14DG7 1078 aa13.61□□□□□ -0.23
LRFN3-202ENST00000585876 Q3C1V9 767 aa13.61□□□□□ -0.23
LRFN3-202ENST00000585876 ASPRV1Q53RT3 343 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms