RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 AOC3Q16853 763 aa14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 EXOC1Q9NV70 894 aa14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 SCAF8Q9UPN6 1271 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 ZNF772Q68DY9 489 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 METTL16Q86W50 562 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 CCDC150Q8NCX0 1101 aa14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 KIF18AQ8NI77 898 aa14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 MASTLQ96GX5 879 aa14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 TDRD3Q9H7E2 651 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 SAMSN1Q9NSI8 373 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-208ENST00000585799 FLT1P17948 1338 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 RASA1P20936 1047 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 TM4SF1P30408 202 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 MLKLQ8NB16 471 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 CCDC43Q96MW1 224 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 DNAI1Q9UI46 699 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 UBE2SQ16763 222 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 PFKFB3Q16875 520 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 CERKLQ49MI3 558 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 RAB34Q9BZG1 259 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 TAB2Q9NYJ8 693 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 PCDHA4Q9UN74 947 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 BCL9LQ86UU0 1499 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 ADCY7P51828 1080 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 PTPAQ15257 358 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 LRRC8AQ8IWT6 810 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 DHX40Q8IX18 779 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 ZBTB9Q96C00 473 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 ZSWIM4Q9H7M6 989 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 KCNQ5Q9NR82 932 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 ANAPC4Q9UJX5 808 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 FBXO2Q9UK22 296 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 PKD1L3Q7Z443 1732 aa14.07□□□□□ -0.16
SMARCA4-208ENST00000585799 WWC2Q6AWC2 1192 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 SP8Q8IXZ3 490 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 KIAA1524Q8TCG1 905 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 SYNRGQ9UMZ2 1314 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 RIOK3O14730 519 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 NAP1L1P55209 391 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 SYT10Q6XYQ8 523 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 KCNF1Q9H3M0 494 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 TMEM260Q9NX78 707 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 EPS15P42566 896 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 CRKP46108 304 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 KRT25Q7Z3Z0 450 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 CABP7Q86V35 215 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 FLAD1Q8NFF5 587 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 TBCKQ8TEA7 893 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 MRFAP1L1Q96HT8 127 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 PKD2L1Q9P0L9 805 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 ATP6V0A2Q9Y487 856 aa14.06□□□□□ -0.16
SMARCA4-208ENST00000585799 PDE4DQ08499 809 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 FBXL16Q8N461 479 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 LRWD1Q9UFC0 647 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 TMEM232C9JQI7 657 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 GNG11P61952 73 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 SBK1Q52WX2 424 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 KRT79Q5XKE5 535 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 TTBK2Q6IQ55 1244 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 CRAMP1Q96RY5 1269 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 TBC1D7Q9P0N9 293 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 GJA3Q9Y6H8 435 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 CNTNAP5Q8WYK1 1306 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 POLRMTO00411 1230 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 MRPL12P52815 198 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 ARHGAP29Q52LW3 1261 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 CERS3Q8IU89 383 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 TIGD1Q96MW7 591 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 PHF20Q9BVI0 1012 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 HDAC9Q9UKV0 1011 aa14.05□□□□□ -0.16
SMARCA4-208ENST00000585799 PSMA7O14818 248 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 ICA1Q05084 483 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 NFIAQ12857 509 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 PKN1Q16512 942 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 CNKSR1Q969H4 720 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 ZFP91Q96JP5 570 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 ATF5Q9Y2D1 282 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 SLIT2O94813 1529 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 DLGAP5Q15398 846 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 CALCRLQ16602 461 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 SLFN13Q68D06 897 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 SNX29Q8TEQ0 813 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 DPF2Q92785 391 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 CUL5Q93034 780 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 PAGE5Q96GU1 130 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 IL17RBQ9NRM6 502 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 RMND1Q9NWS8 449 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 SLFN14P0C7P3 912 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 MIGA2Q7L4E1 593 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 NEK8Q86SG6 692 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 MAP3K14Q99558 947 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 LZTS2Q9BRK4 669 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 RTFDC1Q9BY42 306 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 LZTFL1Q9NQ48 299 aa14.04□□□□□ -0.16
SMARCA4-208ENST00000585799 ECE2O60344 883 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 UBXN1Q04323 297 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms