RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 STRBPQ96SI9 672 aaKnown RBP18.01■□□□□ 0.47
VAPA-209ENST00000585042 DIS3Q9Y2L1 958 aaKnown RBP18.01■□□□□ 0.47
VAPA-209ENST00000585042 MYH7P12883 1935 aa18■□□□□ 0.47
VAPA-209ENST00000585042 CYP2D7A0A087X1C5 515 aa18■□□□□ 0.47
VAPA-209ENST00000585042 TMEM132BQ14DG7 1078 aa18■□□□□ 0.47
VAPA-209ENST00000585042 RIOX2Q8IUF8 465 aa18■□□□□ 0.47
VAPA-209ENST00000585042 GPATCH3Q96I76 525 aa18■□□□□ 0.47
VAPA-209ENST00000585042 MAML3Q96JK9 1138 aa18■□□□□ 0.47
VAPA-209ENST00000585042 LBHD1Q9BQE6 289 aaPredicted RBP18■□□□□ 0.47
VAPA-209ENST00000585042 DNAH12Q6ZR08 3092 aa17.99■□□□□ 0.47
VAPA-209ENST00000585042 KBTBD13C9JR72 458 aa17.99■□□□□ 0.47
VAPA-209ENST00000585042 VWA5AO00534 786 aa17.99■□□□□ 0.47
VAPA-209ENST00000585042 ZFYP08048 801 aaPredicted RBP17.99■□□□□ 0.47
VAPA-209ENST00000585042 DEFB123Q8N688 67 aa17.99■□□□□ 0.47
VAPA-209ENST00000585042 KBTBD3Q8NAB2 608 aa17.99■□□□□ 0.47
VAPA-209ENST00000585042 DCTPP1Q9H773 170 aa17.99■□□□□ 0.47
VAPA-209ENST00000585042 NYAP2Q9P242 653 aa17.99■□□□□ 0.47
VAPA-209ENST00000585042 PRKAG2Q9UGJ0 569 aa17.99■□□□□ 0.47
VAPA-209ENST00000585042 PPP1R9AQ9ULJ8 1098 aa17.99■□□□□ 0.47
VAPA-209ENST00000585042 GSG1L2A8MUP6 293 aa17.98■□□□□ 0.47
VAPA-209ENST00000585042 GNAT2P19087 354 aa17.98■□□□□ 0.47
VAPA-209ENST00000585042 STAT3P40763 770 aa17.98■□□□□ 0.47
VAPA-209ENST00000585042 LRRFIP1Q32MZ4 808 aaKnown RBP17.98■□□□□ 0.47
VAPA-209ENST00000585042 C1orf53Q5VUE5 145 aa17.98■□□□□ 0.47
VAPA-209ENST00000585042 SLC39A5Q6ZMH5 540 aa17.98■□□□□ 0.47
VAPA-209ENST00000585042 CLEC10AQ8IUN9 316 aa17.98■□□□□ 0.47
VAPA-209ENST00000585042 SLC17A8Q8NDX2 589 aa17.98■□□□□ 0.47
VAPA-209ENST00000585042 ZNF287Q9HBT7 754 aa17.98■□□□□ 0.47
VAPA-209ENST00000585042 ZNFX1Q9P2E3 1918 aaKnown RBP17.98■□□□□ 0.47
VAPA-209ENST00000585042 SMIM22K7EJ46 135 aa17.97■□□□□ 0.47
VAPA-209ENST00000585042 CHGBP05060 677 aa17.97■□□□□ 0.47
VAPA-209ENST00000585042 MDM2Q00987 491 aaPredicted RBP17.97■□□□□ 0.47
VAPA-209ENST00000585042 KCTD2Q14681 263 aa17.97■□□□□ 0.47
VAPA-209ENST00000585042 SNX17Q15036 470 aa17.97■□□□□ 0.47
VAPA-209ENST00000585042 GJC2Q5T442 439 aaPredicted RBP17.97■□□□□ 0.47
VAPA-209ENST00000585042 FAM109BQ6ICB4 259 aaPredicted RBP17.97■□□□□ 0.47
VAPA-209ENST00000585042 APPBP2Q92624 585 aa17.97■□□□□ 0.47
VAPA-209ENST00000585042 MMP19Q99542 508 aa17.97■□□□□ 0.47
VAPA-209ENST00000585042 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.97■□□□□ 0.47
VAPA-209ENST00000585042 MKNK2Q9HBH9 465 aa17.97■□□□□ 0.47
VAPA-209ENST00000585042 SYNPO2Q9UMS6 1093 aa17.97■□□□□ 0.47
VAPA-209ENST00000585042 PARP14Q460N5 1801 aa17.97■□□□□ 0.47
VAPA-209ENST00000585042 RNF113AO15541 343 aaKnown RBP17.96■□□□□ 0.47
VAPA-209ENST00000585042 SMARCA5O60264 1052 aaPredicted RBP17.96■□□□□ 0.47
VAPA-209ENST00000585042 RASA1P20936 1047 aa17.96■□□□□ 0.47
VAPA-209ENST00000585042 ATN1P54259 1190 aaPredicted RBP17.96■□□□□ 0.47
VAPA-209ENST00000585042 RTP1P59025 263 aa17.96■□□□□ 0.47
VAPA-209ENST00000585042 ZNF792Q3KQV3 632 aa17.96■□□□□ 0.47
VAPA-209ENST00000585042 C20orf194Q5TEA3 1177 aa17.96■□□□□ 0.47
VAPA-209ENST00000585042 MSL3Q8N5Y2 521 aaKnown RBP17.96■□□□□ 0.47
VAPA-209ENST00000585042 TINF2Q9BSI4 451 aa17.96■□□□□ 0.47
VAPA-209ENST00000585042 FBXO28Q9NVF7 368 aa17.96■□□□□ 0.47
VAPA-209ENST00000585042 ZNF214Q9UL59 606 aaPredicted RBP17.96■□□□□ 0.47
VAPA-209ENST00000585042 ROBO3Q96MS0 1386 aa17.95■□□□□ 0.46
VAPA-209ENST00000585042 LRRC41Q15345 812 aa17.95■□□□□ 0.46
VAPA-209ENST00000585042 PRAMEF19Q5SWL8 479 aa17.95■□□□□ 0.46
VAPA-209ENST00000585042 FAM83BQ5T0W9 1011 aa17.95■□□□□ 0.46
VAPA-209ENST00000585042 PRPF38AQ8NAV1 312 aaKnown RBP17.95■□□□□ 0.46
VAPA-209ENST00000585042 REPS2Q8NFH8 660 aa17.95■□□□□ 0.46
VAPA-209ENST00000585042 OSBP2Q969R2 916 aa17.95■□□□□ 0.46
VAPA-209ENST00000585042 MKL1Q969V6 931 aa17.95■□□□□ 0.46
VAPA-209ENST00000585042 MTMR10Q9NXD2 777 aa17.95■□□□□ 0.46
VAPA-209ENST00000585042 STXBP5LQ9Y2K9 1186 aa17.95■□□□□ 0.46
VAPA-209ENST00000585042 F5H6K3 240 aa17.94■□□□□ 0.46
VAPA-209ENST00000585042 ATP2A1O14983 1001 aa17.94■□□□□ 0.46
VAPA-209ENST00000585042 RARBP10826 455 aa17.94■□□□□ 0.46
VAPA-209ENST00000585042 KLRC3Q07444 240 aa17.94■□□□□ 0.46
VAPA-209ENST00000585042 SAMD1Q6SPF0 538 aaPredicted RBP17.94■□□□□ 0.46
VAPA-209ENST00000585042 ZNF444Q8N0Y2 327 aaPredicted RBP17.94■□□□□ 0.46
VAPA-209ENST00000585042 SLF1Q9BQI6 1058 aa17.94■□□□□ 0.46
VAPA-209ENST00000585042 TEX13BQ9BXU2 312 aa17.94■□□□□ 0.46
VAPA-209ENST00000585042 COL6A3P12111 3177 aa17.93■□□□□ 0.46
VAPA-209ENST00000585042 MINDY4BA8MYZ0 360 aa17.93■□□□□ 0.46
VAPA-209ENST00000585042 PATL2C9JE40 543 aaKnown RBP17.93■□□□□ 0.46
VAPA-209ENST00000585042 POTEB2H3BUK9 544 aa17.93■□□□□ 0.46
VAPA-209ENST00000585042 ADCYAP1R1P41586 468 aa17.93■□□□□ 0.46
VAPA-209ENST00000585042 RNF180Q86T96 592 aa17.93■□□□□ 0.46
VAPA-209ENST00000585042 XPNPEP3Q9NQH7 507 aa17.93■□□□□ 0.46
VAPA-209ENST00000585042 PHF24Q9UPV7 400 aa17.93■□□□□ 0.46
VAPA-209ENST00000585042 ATP11BQ9Y2G3 1177 aa17.93■□□□□ 0.46
VAPA-209ENST00000585042 GREB1LQ9C091 1923 aaPredicted RBP17.93■□□□□ 0.46
VAPA-209ENST00000585042 COL11A1P12107 1806 aaPredicted RBP17.93■□□□□ 0.46
VAPA-209ENST00000585042 IGKV6D-41A0A0C4DH26 115 aa17.92■□□□□ 0.46
VAPA-209ENST00000585042 GPAA1O43292 621 aa17.92■□□□□ 0.46
VAPA-209ENST00000585042 RAD21O60216 631 aa17.92■□□□□ 0.46
VAPA-209ENST00000585042 PGK2P07205 417 aa17.92■□□□□ 0.46
VAPA-209ENST00000585042 ANO1Q5XXA6 986 aa17.92■□□□□ 0.46
VAPA-209ENST00000585042 MAMDC4Q6UXC1 1216 aa17.92■□□□□ 0.46
VAPA-209ENST00000585042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.92■□□□□ 0.466e-6■□□□□ 10
VAPA-209ENST00000585042 TSEN34Q9BSV6 310 aaKnown RBP17.92■□□□□ 0.46
VAPA-209ENST00000585042 CLIP2Q9UDT6 1046 aa17.92■□□□□ 0.46
VAPA-209ENST00000585042 CNPY2Q9Y2B0 182 aa17.92■□□□□ 0.46
VAPA-209ENST00000585042 TTC41PQ6P2S7 1318 aa17.92■□□□□ 0.46
VAPA-209ENST00000585042 ERC2O15083 957 aa17.91■□□□□ 0.46
VAPA-209ENST00000585042 ZBED4O75132 1171 aa17.91■□□□□ 0.46
VAPA-209ENST00000585042 FDX1P10109 184 aa17.91■□□□□ 0.46
VAPA-209ENST00000585042 AKR1A1P14550 325 aa17.91■□□□□ 0.46
VAPA-209ENST00000585042 FAM47AQ5JRC9 791 aa17.91■□□□□ 0.46
VAPA-209ENST00000585042 ZNF467Q7Z7K2 595 aaPredicted RBP17.91■□□□□ 0.46
VAPA-209ENST00000585042 NACAP1Q9BZK3 213 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms