RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 ZSCAN25Q6NSZ9 544 aa27.63■■■□□ 2.01
TRAPPC8-213ENST00000584876 LRRCC1Q9C099 1032 aa27.63■■■□□ 2.01
TRAPPC8-213ENST00000584876 PRKAG2Q9UGJ0 569 aa27.63■■■□□ 2.01
TRAPPC8-213ENST00000584876 SMCHD1A6NHR9 2005 aa27.63■■■□□ 2.01
TRAPPC8-213ENST00000584876 GREB1LQ9C091 1923 aaPredicted RBP27.63■■■□□ 2.01
TRAPPC8-213ENST00000584876 FCER1AP12319 257 aa27.62■■■□□ 2.01
TRAPPC8-213ENST00000584876 TMEM132BQ14DG7 1078 aa27.62■■■□□ 2.01
TRAPPC8-213ENST00000584876 MAML3Q96JK9 1138 aa27.62■■■□□ 2.01
TRAPPC8-213ENST00000584876 KANSL2Q9H9L4 492 aa27.62■■■□□ 2.01
TRAPPC8-213ENST00000584876 SLC25A27O95847 323 aa27.61■■■□□ 2.01
TRAPPC8-213ENST00000584876 MYCNP04198 464 aaPredicted RBP27.61■■■□□ 2.01
TRAPPC8-213ENST00000584876 PRAMEF19Q5SWL8 479 aa27.61■■■□□ 2.01
TRAPPC8-213ENST00000584876 CTR9Q6PD62 1173 aa27.61■■■□□ 2.01
TRAPPC8-213ENST00000584876 PUS7LQ9H0K6 701 aaKnown RBP27.61■■■□□ 2.01
TRAPPC8-213ENST00000584876 MTMR10Q9NXD2 777 aa27.61■■■□□ 2.01
TRAPPC8-213ENST00000584876 RCAN3Q9UKA8 241 aa27.61■■■□□ 2.01
TRAPPC8-213ENST00000584876 ATP11BQ9Y2G3 1177 aa27.61■■■□□ 2.01
TRAPPC8-213ENST00000584876 SMARCA5O60264 1052 aaPredicted RBP27.6■■■□□ 2.01
TRAPPC8-213ENST00000584876 GOPCQ9HD26 462 aa27.6■■■□□ 2.01
TRAPPC8-213ENST00000584876 FBXO28Q9NVF7 368 aa27.6■■■□□ 2.01
TRAPPC8-213ENST00000584876 ARPP21Q9UBL0 812 aaPredicted RBP27.6■■■□□ 2.01
TRAPPC8-213ENST00000584876 RAD21O60216 631 aa27.59■■■□□ 2.01
TRAPPC8-213ENST00000584876 SLC39A5Q6ZMH5 540 aa27.59■■■□□ 2.01
TRAPPC8-213ENST00000584876 MMP19Q99542 508 aa27.59■■■□□ 2.01
TRAPPC8-213ENST00000584876 ADAMTS5Q9UNA0 930 aa27.59■■■□□ 2.01
TRAPPC8-213ENST00000584876 STXBP5LQ9Y2K9 1186 aa27.59■■■□□ 2.01
TRAPPC8-213ENST00000584876 DLL1O00548 723 aa27.58■■■□□ 2.01
TRAPPC8-213ENST00000584876 MYH4Q9Y623 1939 aa27.57■■■□□ 2
TRAPPC8-213ENST00000584876 FAM47AQ5JRC9 791 aa27.57■■■□□ 2
TRAPPC8-213ENST00000584876 RIOX2Q8IUF8 465 aa27.57■■■□□ 2
TRAPPC8-213ENST00000584876 PPP1R9AQ9ULJ8 1098 aa27.57■■■□□ 2
TRAPPC8-213ENST00000584876 VWA5AO00534 786 aa27.56■■■□□ 2
TRAPPC8-213ENST00000584876 LRRC41Q15345 812 aa27.56■■■□□ 2
TRAPPC8-213ENST00000584876 FAM83BQ5T0W9 1011 aa27.56■■■□□ 2
TRAPPC8-213ENST00000584876 PGK2P07205 417 aa27.55■■■□□ 2
TRAPPC8-213ENST00000584876 STAT3P40763 770 aa27.55■■■□□ 2
TRAPPC8-213ENST00000584876 ADCYAP1R1P41586 468 aa27.55■■■□□ 2
TRAPPC8-213ENST00000584876 KCTD2Q14681 263 aa27.55■■■□□ 2
TRAPPC8-213ENST00000584876 SNX17Q15036 470 aa27.55■■■□□ 2
TRAPPC8-213ENST00000584876 TRIM60Q495X7 471 aa27.55■■■□□ 2
TRAPPC8-213ENST00000584876 C20orf194Q5TEA3 1177 aa27.55■■■□□ 2
TRAPPC8-213ENST00000584876 STRBPQ96SI9 672 aaKnown RBP27.55■■■□□ 2
TRAPPC8-213ENST00000584876 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.55■■■□□ 2
TRAPPC8-213ENST00000584876 PRDM5Q9NQX1 630 aaPredicted RBP27.55■■■□□ 2
TRAPPC8-213ENST00000584876 ECHDC1Q9NTX5 307 aa27.55■■■□□ 2
TRAPPC8-213ENST00000584876 NRBP1Q9UHY1 535 aa27.55■■■□□ 2
TRAPPC8-213ENST00000584876 LAMA2P24043 3122 aaKnown RBP27.55■■■□□ 2
TRAPPC8-213ENST00000584876 COPB2P35606 906 aa27.54■■■□□ 2
TRAPPC8-213ENST00000584876 ZNF214Q9UL59 606 aaPredicted RBP27.54■■■□□ 2
TRAPPC8-213ENST00000584876 SBK1Q52WX2 424 aa27.53■■■□□ 2
TRAPPC8-213ENST00000584876 STK11IPQ8N1F8 1099 aa27.53■■■□□ 2
TRAPPC8-213ENST00000584876 REPS2Q8NFH8 660 aa27.53■■■□□ 2
TRAPPC8-213ENST00000584876 FERMT2Q96AC1 680 aa27.53■■■□□ 2
TRAPPC8-213ENST00000584876 TINF2Q9BSI4 451 aa27.53■■■□□ 2
TRAPPC8-213ENST00000584876 DIS3Q9Y2L1 958 aaKnown RBP27.53■■■□□ 2
TRAPPC8-213ENST00000584876 RARBP10826 455 aa27.52■■■□□ 2
TRAPPC8-213ENST00000584876 RASA1P20936 1047 aa27.52■■■□□ 2
TRAPPC8-213ENST00000584876 ZNF792Q3KQV3 632 aa27.52■■■□□ 2
TRAPPC8-213ENST00000584876 KBTBD3Q8NAB2 608 aa27.52■■■□□ 2
TRAPPC8-213ENST00000584876 MKNK2Q9HBH9 465 aa27.52■■■□□ 2
TRAPPC8-213ENST00000584876 XPNPEP3Q9NQH7 507 aa27.52■■■□□ 2
TRAPPC8-213ENST00000584876 ROBO3Q96MS0 1386 aa27.51■■□□□ 1.99
TRAPPC8-213ENST00000584876 GSG1L2A8MUP6 293 aa27.51■■□□□ 1.99
TRAPPC8-213ENST00000584876 GIMAP6Q6P9H5 292 aa27.51■■□□□ 1.99
TRAPPC8-213ENST00000584876 GPATCH3Q96I76 525 aa27.51■■□□□ 1.99
TRAPPC8-213ENST00000584876 NUP88Q99567 741 aaPredicted RBP27.51■■□□□ 1.99
TRAPPC8-213ENST00000584876 SLF1Q9BQI6 1058 aa27.51■■□□□ 1.99
TRAPPC8-213ENST00000584876 PDLIM7Q9NR12 457 aa27.51■■□□□ 1.99
TRAPPC8-213ENST00000584876 A0A0C4DFX4 3053 aa27.51■■□□□ 1.99
TRAPPC8-213ENST00000584876 MINDY4BA8MYZ0 360 aa27.5■■□□□ 1.99
TRAPPC8-213ENST00000584876 POTEB2H3BUK9 544 aa27.5■■□□□ 1.99
TRAPPC8-213ENST00000584876 FAM109BQ6ICB4 259 aaPredicted RBP27.5■■□□□ 1.99
TRAPPC8-213ENST00000584876 APPBP2Q92624 585 aa27.5■■□□□ 1.99
TRAPPC8-213ENST00000584876 OSBP2Q969R2 916 aa27.5■■□□□ 1.99
TRAPPC8-213ENST00000584876 NYAP2Q9P242 653 aa27.5■■□□□ 1.99
TRAPPC8-213ENST00000584876 PHF24Q9UPV7 400 aa27.5■■□□□ 1.99
TRAPPC8-213ENST00000584876 TAL1P17542 331 aaPredicted RBP27.49■■□□□ 1.99
TRAPPC8-213ENST00000584876 C1orf53Q5VUE5 145 aa27.49■■□□□ 1.99
TRAPPC8-213ENST00000584876 BADQ92934 168 aa27.49■■□□□ 1.99
TRAPPC8-213ENST00000584876 NDUFB10O96000 172 aa27.48■■□□□ 1.99
TRAPPC8-213ENST00000584876 PGK1P00558 417 aa27.48■■□□□ 1.99
TRAPPC8-213ENST00000584876 TSHZ3Q63HK5 1081 aa27.48■■□□□ 1.99
TRAPPC8-213ENST00000584876 SNRNP48Q6IEG0 339 aaKnown RBP27.48■■□□□ 1.99
TRAPPC8-213ENST00000584876 RNF180Q86T96 592 aa27.48■■□□□ 1.99
TRAPPC8-213ENST00000584876 TEX13BQ9BXU2 312 aa27.48■■□□□ 1.99
TRAPPC8-213ENST00000584876 F5H6K3 240 aa27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 RNF113AO15541 343 aaKnown RBP27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 ZNF865P0CJ78 1059 aaPredicted RBP27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 AKR1A1P14550 325 aa27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 KLRC3Q07444 240 aa27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 SHHQ15465 462 aa27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 SH3RF1Q7Z6J0 888 aa27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 FAM161BQ96MY7 647 aa27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 GUCD1Q96NT3 240 aa27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 EPB41L4AQ9HCS5 686 aaPredicted RBP27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 CNPY2Q9Y2B0 182 aa27.47■■□□□ 1.99
TRAPPC8-213ENST00000584876 MCM3APO60318 1980 aa27.46■■□□□ 1.99
TRAPPC8-213ENST00000584876 TRIM43BA6NCK2 446 aa27.46■■□□□ 1.99
TRAPPC8-213ENST00000584876 GPAA1O43292 621 aa27.46■■□□□ 1.99
TRAPPC8-213ENST00000584876 TDO2P48775 406 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms