RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TMTC2Q8N394 836 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 TMEM60Q9H2L4 133 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 TMOD2Q9NZR1 351 aa11.72□□□□□ -0.53
RFFL-212ENST00000584655 NOL7Q9UMY1 257 aaKnown RBP11.72□□□□□ -0.53
RFFL-212ENST00000584655 TMEM232C9JQI7 657 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 PSMD14O00487 310 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 SLC39A14Q15043 492 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 DLGAP5Q15398 846 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 CCDC144BQ3MJ40 725 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 TMTC3Q6ZXV5 915 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 COL14A1Q05707 1796 aaKnown RBP11.71□□□□□ -0.53
RFFL-212ENST00000584655 LAMA2P24043 3122 aaKnown RBP11.71□□□□□ -0.53
RFFL-212ENST00000584655 MEIS1O00470 390 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 PKN1Q16512 942 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 STX1AQ16623 288 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 ADALQ6DHV7 355 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 JDP2Q8WYK2 163 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 GLIS2Q9BZE0 524 aaPredicted RBP11.71□□□□□ -0.53
RFFL-212ENST00000584655 MMRN2Q9H8L6 949 aa11.71□□□□□ -0.53
RFFL-212ENST00000584655 POTEMA6NI47 508 aa11.71□□□□□ -0.54
RFFL-212ENST00000584655 ZNF76P36508 570 aa11.71□□□□□ -0.54
RFFL-212ENST00000584655 DNA2P51530 1060 aa11.71□□□□□ -0.54
RFFL-212ENST00000584655 ACER1Q8TDN7 264 aa11.71□□□□□ -0.54
RFFL-212ENST00000584655 ZSWIM4Q9H7M6 989 aa11.71□□□□□ -0.54
RFFL-212ENST00000584655 ANO10Q9NW15 660 aa11.71□□□□□ -0.54
RFFL-212ENST00000584655 RTEL1Q9NZ71 1219 aa11.71□□□□□ -0.54
RFFL-212ENST00000584655 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.54
RFFL-212ENST00000584655 CCDC39Q9UFE4 941 aa11.71□□□□□ -0.54
RFFL-212ENST00000584655 EEF2P13639 858 aaKnown RBP11.7□□□□□ -0.54
RFFL-212ENST00000584655 KCTD19Q17RG1 926 aaPredicted RBP11.7□□□□□ -0.54
RFFL-212ENST00000584655 TTLL6Q8N841 843 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 XPO4Q9C0E2 1151 aaKnown RBP11.7□□□□□ -0.54
RFFL-212ENST00000584655 SAMSN1Q9NSI8 373 aaKnown RBP11.7□□□□□ -0.54
RFFL-212ENST00000584655 NUP98P52948 1817 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 EPB41L2O43491 1005 aaKnown RBP11.7□□□□□ -0.54
RFFL-212ENST00000584655 LRRC41Q15345 812 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 RRAGBQ5VZM2 374 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 FOXP4Q8IVH2 680 aaPredicted RBP11.7□□□□□ -0.54
RFFL-212ENST00000584655 DPF2Q92785 391 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 SMARCE1Q969G3 411 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 VPS16Q9H269 839 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 BAZ2AQ9UIF9 1905 aaKnown RBP11.7□□□□□ -0.54
RFFL-212ENST00000584655 TDP2O95551 362 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 CLEC17AQ6ZS10 378 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 BRAPQ7Z569 592 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 RRP36Q96EU6 259 aaKnown RBP11.7□□□□□ -0.54
RFFL-212ENST00000584655 CDK5RAP3Q96JB5 506 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.7□□□□□ -0.54
RFFL-212ENST00000584655 A0A087X0B3 334 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 IBSPP21815 317 aaPredicted RBP11.7□□□□□ -0.54
RFFL-212ENST00000584655 ICA1Q05084 483 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 SGMS1Q86VZ5 419 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 SP8Q8IXZ3 490 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 BLIDQ8IZY5 108 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 FMR1NBQ8N0W7 255 aaPredicted RBP11.7□□□□□ -0.54
RFFL-212ENST00000584655 TBCKQ8TEA7 893 aa11.7□□□□□ -0.54
RFFL-212ENST00000584655 CLCN1P35523 988 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 STAT6P42226 847 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 ADKP55263 362 aaKnown RBP11.69□□□□□ -0.54
RFFL-212ENST00000584655 RHBDL3P58872 404 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 TTLL12Q14166 644 aaPredicted RBP11.69□□□□□ -0.54
RFFL-212ENST00000584655 TBC1D5Q92609 795 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 ZNF512BQ96KM6 892 aaPredicted RBP11.69□□□□□ -0.54
RFFL-212ENST00000584655 HINFPQ9BQA5 517 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 GDAQ9Y2T3 454 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 RTL9Q8NET4 1388 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 AGXT2Q9BYV1 514 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 STAT3P40763 770 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 SLC35G1Q2M3R5 365 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 AXDND1Q5T1B0 1012 aaPredicted RBP11.69□□□□□ -0.54
RFFL-212ENST00000584655 COA1Q9GZY4 146 aa11.69□□□□□ -0.54
RFFL-212ENST00000584655 KRT18P05783 430 aaKnown RBP11.68□□□□□ -0.54
RFFL-212ENST00000584655 ADRA2BP18089 450 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 UBASH3AP57075 661 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 ALX1Q15699 326 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 CTNND2Q9UQB3 1225 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 NFE2L3Q9Y4A8 694 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 CTDP1Q9Y5B0 961 aaPredicted RBP11.68□□□□□ -0.54
RFFL-212ENST00000584655 TRIM49BA6NDI0 452 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 YDJCA8MPS7 323 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 NAA30Q147X3 362 aaPredicted RBP11.68□□□□□ -0.54
RFFL-212ENST00000584655 APOBEC3HQ6NTF7 200 aaKnown RBP11.68□□□□□ -0.54
RFFL-212ENST00000584655 PKD1L3Q7Z443 1732 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 LETM1O95202 739 aaPredicted RBP11.68□□□□□ -0.54
RFFL-212ENST00000584655 JAG1P78504 1218 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 SLFN13Q68D06 897 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 METTL16Q86W50 562 aaKnown RBP11.68□□□□□ -0.54
RFFL-212ENST00000584655 PCDHA1Q9Y5I3 950 aa11.68□□□□□ -0.54
RFFL-212ENST00000584655 SALL1Q9NSC2 1324 aa11.67□□□□□ -0.54
RFFL-212ENST00000584655 SLF2Q8IX21 1173 aa11.67□□□□□ -0.54
RFFL-212ENST00000584655 NELFCDQ8IXH7 590 aa11.67□□□□□ -0.54
RFFL-212ENST00000584655 CACTINQ8WUQ7 758 aaKnown RBP11.67□□□□□ -0.54
RFFL-212ENST00000584655 DESI2Q9BSY9 194 aa11.67□□□□□ -0.54
RFFL-212ENST00000584655 SFI1A8K8P3 1242 aa11.67□□□□□ -0.54
RFFL-212ENST00000584655 CUL4BQ13620 913 aa11.67□□□□□ -0.54
RFFL-212ENST00000584655 POSTNQ15063 836 aa11.67□□□□□ -0.54
RFFL-212ENST00000584655 RILPL1Q5EBL4 403 aa11.67□□□□□ -0.54
RFFL-212ENST00000584655 POTEDQ86YR6 584 aa11.67□□□□□ -0.54
RFFL-212ENST00000584655 NIM1KQ8IY84 436 aa11.67□□□□□ -0.54
RFFL-212ENST00000584655 NAT10Q9H0A0 1025 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms