RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 ZFYVE16Q7Z3T8 1539 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 ARHGEF40Q8TER5 1519 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 REREQ9P2R6 1566 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 RTEL1-TNFRSF6BF6WH68 1400 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 RBAK-RBAKDNI3L0D1 243 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 ZNF76P36508 570 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 IKZF1Q13422 519 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 AFAP1Q8N556 730 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 DNAJB8Q8NHS0 232 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 PI4K2BQ8TCG2 481 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 CYB5D2Q8WUJ1 264 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 LRRC3Q9BY71 257 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 CEP131Q9UPN4 1083 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 PTPN23Q9H3S7 1636 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 CCDC141Q6ZP82 1450 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 SHANK2Q9UPX8 1470 aa7.73□□□□□ -1.17
NF1-223ENST00000584328 MAST1Q9Y2H9 1570 aa7.72□□□□□ -1.17
NF1-223ENST00000584328 YEATS2Q9ULM3 1422 aa7.72□□□□□ -1.17
NF1-223ENST00000584328 CHURC1-FNTBB4DL54 471 aa7.72□□□□□ -1.17
NF1-223ENST00000584328 H3BS24 57 aa7.72□□□□□ -1.17
NF1-223ENST00000584328 KIR3DL1P43629 444 aa7.72□□□□□ -1.17
NF1-223ENST00000584328 CRKP46108 304 aa7.72□□□□□ -1.17
NF1-223ENST00000584328 SLFN12Q8IYM2 578 aa7.72□□□□□ -1.17
NF1-223ENST00000584328 PPP1R13LQ8WUF5 828 aa7.72□□□□□ -1.17
NF1-223ENST00000584328 BRMS1Q9HCU9 246 aa7.72□□□□□ -1.17
NF1-223ENST00000584328 HECW2Q9P2P5 1572 aa7.71□□□□□ -1.17
NF1-223ENST00000584328 ABCC5O15440 1437 aa7.71□□□□□ -1.17
NF1-223ENST00000584328 FANCCQ00597 558 aa7.71□□□□□ -1.18
NF1-223ENST00000584328 SEMA3GQ9NS98 782 aa7.71□□□□□ -1.18
NF1-223ENST00000584328 MBNL3Q9NUK0 354 aaKnown RBP7.71□□□□□ -1.18
NF1-223ENST00000584328 UBP1Q9NZI7 540 aa7.71□□□□□ -1.18
NF1-223ENST00000584328 ADAMTS6Q9UKP5 1117 aa7.71□□□□□ -1.18
NF1-223ENST00000584328 PCDHB14Q9Y5E9 798 aa7.71□□□□□ -1.18
NF1-223ENST00000584328 ST14Q9Y5Y6 855 aa7.71□□□□□ -1.18
NF1-223ENST00000584328 PLXNC1O60486 1568 aa7.71□□□□□ -1.18
NF1-223ENST00000584328 DIP2CQ9Y2E4 1556 aa7.71□□□□□ -1.18
NF1-223ENST00000584328 DNMT1P26358 1616 aaKnown RBP7.7□□□□□ -1.18
NF1-223ENST00000584328 DAPK1P53355 1430 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 KIDINS220Q9ULH0 1771 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 ATP7AQ04656 1500 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 DNAJA2O60884 412 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 RNASE1P07998 156 aaKnown RBP7.7□□□□□ -1.18
NF1-223ENST00000584328 TNNI2P48788 182 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 HNRNPMP52272 730 aaKnown RBP eCLIP7.7□□□□□ -1.18
NF1-223ENST00000584328 ZP2Q05996 745 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 TNK2Q07912 1038 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 APOBRQ0VD83 1088 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 MLECQ14165 292 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 SEZ6Q53EL9 994 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 KRTAP4-8Q9BYQ9 185 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 RC3H2Q9HBD1 1191 aaKnown RBP7.7□□□□□ -1.18
NF1-223ENST00000584328 ATP13A1Q9HD20 1204 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 PRDM7Q9NQW5 492 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 METTL5Q9NRN9 209 aaKnown RBP7.7□□□□□ -1.18
NF1-223ENST00000584328 ABCA6Q8N139 1617 aa7.7□□□□□ -1.18
NF1-223ENST00000584328 PTPRKQ15262 1439 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 ADGRL2O95490 1459 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 AGLP35573 1532 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 PAX4O43316 350 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 SLC23A3Q6PIS1 610 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 KIAA0825Q8IV33 1275 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 PHACTR4Q8IZ21 702 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 BAHD1Q8TBE0 780 aaPredicted RBP7.69□□□□□ -1.18
NF1-223ENST00000584328 CCDC74BQ96LY2 380 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 SPON2Q9BUD6 331 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 CROCC2H7BZ55 1655 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 SIGLEC1Q9BZZ2 1709 aa7.69□□□□□ -1.18
NF1-223ENST00000584328 ATP10AO60312 1499 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 RECKO95980 971 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 ITGB5P18084 799 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 THAP5Q7Z6K1 395 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 USP48Q86UV5 1035 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 LRRN4CLQ8ND94 238 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 PIWIL2Q8TC59 973 aaKnown RBP7.68□□□□□ -1.18
NF1-223ENST00000584328 RNF34Q969K3 372 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 UBE2FQ969M7 185 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 Q96M66 194 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 KIF2CQ99661 725 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 ZSWIM5Q9P217 1185 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 C9orf84Q5VXU9 1444 aa7.68□□□□□ -1.18
NF1-223ENST00000584328 SLC22A31A6NKX4 558 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 ATE1O95260 518 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 VAMP1P23763 118 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 MCM4P33991 863 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 ZNF394Q53GI3 561 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 GK5Q6ZS86 529 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 NKD1Q969G9 470 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 EAF1Q96JC9 268 aaPredicted RBP7.67□□□□□ -1.18
NF1-223ENST00000584328 NT5C1AQ9BXI3 368 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 CARS2Q9HA77 564 aaKnown RBP7.67□□□□□ -1.18
NF1-223ENST00000584328 LMCD1Q9NZU5 365 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 PCDHGB7Q9Y5F8 929 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 SPAG9O60271 1321 aaKnown RBP7.67□□□□□ -1.18
NF1-223ENST00000584328 NCOA1Q15788 1441 aa7.67□□□□□ -1.18
NF1-223ENST00000584328 JUNBP17275 347 aaPredicted RBP7.66□□□□□ -1.18
NF1-223ENST00000584328 CLCQ05315 142 aa7.66□□□□□ -1.18
NF1-223ENST00000584328 ARSHQ5FYA8 562 aa7.66□□□□□ -1.18
NF1-223ENST00000584328 RNF141Q8WVD5 230 aa7.66□□□□□ -1.18
NF1-223ENST00000584328 EHMT1Q9H9B1 1298 aa7.66□□□□□ -1.18
NF1-223ENST00000584328 GMIPQ9P107 970 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms