RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 RRP12Q5JTH9 1297 aaKnown RBP9.79□□□□□ -0.84
BDNF-219ENST00000584049 SMYD4Q8IYR2 804 aaPredicted RBP9.79□□□□□ -0.84
BDNF-219ENST00000584049 NUP133Q8WUM0 1156 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 PPM1EQ8WY54 764 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 DLEC1Q9Y238 1755 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 EIF3CLB5ME19 914 aaKnown RBP9.79□□□□□ -0.84
BDNF-219ENST00000584049 CPP00450 1065 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 CALM1P0DP23 149 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 CALM2P0DP24 149 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 CALM3P0DP25 149 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 NCAPH2Q6IBW4 605 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 COG1Q8WTW3 980 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 NELFBQ8WX92 580 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 ESR2Q92731 530 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 SHISA4Q96DD7 197 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 EIF3CQ99613 913 aaKnown RBP9.79□□□□□ -0.84
BDNF-219ENST00000584049 SAR1BQ9Y6B6 198 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 SLC4A4Q9Y6R1 1079 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 LGALS16A8MUM7 142 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 IRS4O14654 1257 aaPredicted RBP9.79□□□□□ -0.84
BDNF-219ENST00000584049 SYF2O95926 243 aaKnown RBP9.79□□□□□ -0.84
BDNF-219ENST00000584049 WWC2Q6AWC2 1192 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 IQCEQ6IPM2 695 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 TOMM22Q9NS69 142 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 TAB2Q9NYJ8 693 aa9.79□□□□□ -0.84
BDNF-219ENST00000584049 SPATA31A3Q5VYP0 1347 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 ZC3H4Q9UPT8 1303 aaKnown RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 TOGARAM1Q9Y4F4 1720 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 FAM205CA6NFA0 338 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 SHOX2O60902 331 aaPredicted RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 ABL1P00519 1130 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 EEF1GP26641 437 aaKnown RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 PPARAQ07869 468 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 RASGRF1Q13972 1273 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 TTC31Q49AM3 519 aaPredicted RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 ZKSCAN3Q9BRR0 538 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 VPS16Q9H269 839 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 VPS54Q9P1Q0 977 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 CAPN11Q9UMQ6 739 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 LUC7L2Q9Y383 392 aaKnown RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 RNF225M0QZC1 329 aaPredicted RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 STARD3NLO95772 234 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 TFRCP02786 760 aaKnown RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 PCP11498 1178 aaKnown RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 CASP1P29466 404 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 MEA1Q16626 185 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 TSR1Q2NL82 804 aaKnown RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 LCORLQ8N3X6 602 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 TNKSO95271 1327 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 RREB1Q92766 1687 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 ATF3P18847 181 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 UBXN1Q04323 297 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 EARS2Q5JPH6 523 aaKnown RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 ARL6IP4Q66PJ3 421 aaKnown RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 NOC3LQ8WTT2 800 aaKnown RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 GUCA1BQ9UMX6 200 aa9.78□□□□□ -0.84
BDNF-219ENST00000584049 PDS5AQ29RF7 1337 aaKnown RBP9.78□□□□□ -0.84
BDNF-219ENST00000584049 KRT86O43790 486 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 DDAH1O94760 285 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 ITIH3Q06033 890 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 STIM1Q13586 685 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 CMTR1Q8N1G2 835 aaKnown RBP9.77□□□□□ -0.85
BDNF-219ENST00000584049 MB21D1Q8N884 522 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 RETREG2Q8NC44 543 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 CABLES1Q8TDN4 633 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 THAP9Q9H5L6 903 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 DUOX1Q9NRD9 1551 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 PRKAB2O43741 272 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 RPN1P04843 607 aaKnown RBP9.77□□□□□ -0.85
BDNF-219ENST00000584049 MYL1P05976 194 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 IL2RBP14784 551 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 CDC25AP30304 524 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 CYLC1P35663 651 aaPredicted RBP9.77□□□□□ -0.85
BDNF-219ENST00000584049 PTGDRQ13258 359 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 NPY5RQ15761 445 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 DNAJC21Q5F1R6 531 aaKnown RBP9.77□□□□□ -0.85
BDNF-219ENST00000584049 FOXR1Q6PIV2 292 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 TMED8Q6PL24 325 aaPredicted RBP9.77□□□□□ -0.85
BDNF-219ENST00000584049 CATIPQ7Z7H3 387 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 ZNF507Q8TCN5 953 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 CHP1Q99653 195 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 NUP58Q9BVL2 599 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 SOS2Q07890 1332 aaPredicted RBP9.77□□□□□ -0.85
BDNF-219ENST00000584049 TTC26A0AVF1 554 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 PARP1P09874 1014 aaKnown RBP9.77□□□□□ -0.85
BDNF-219ENST00000584049 EIF5P55010 431 aaKnown RBP9.77□□□□□ -0.85
BDNF-219ENST00000584049 HERVK_113P62684 666 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 KCNB1Q14721 858 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 CCDC170Q8IYT3 715 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 FNBP4Q8N3X1 1017 aaPredicted RBP9.77□□□□□ -0.85
BDNF-219ENST00000584049 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
BDNF-219ENST00000584049 CRACR2AQ9BSW2 395 aa9.77□□□□□ -0.85
BDNF-219ENST00000584049 COL5A2P05997 1499 aaPredicted RBP9.76□□□□□ -0.85
BDNF-219ENST00000584049 LONP1P36776 959 aaKnown RBP9.76□□□□□ -0.85
BDNF-219ENST00000584049 ZNF174Q15697 407 aa9.76□□□□□ -0.85
BDNF-219ENST00000584049 CCDC122Q5T0U0 273 aa9.76□□□□□ -0.85
BDNF-219ENST00000584049 ICE2Q659A1 982 aa9.76□□□□□ -0.85
BDNF-219ENST00000584049 CCDC70Q6NSX1 233 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms