RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.8■□□□□ 0.6
SKA2-209ENST00000583976 PUS7LQ9H0K6 701 aaKnown RBP18.8■□□□□ 0.6
SKA2-209ENST00000583976 ARHGEF10LQ9HCE6 1279 aa18.8■□□□□ 0.6
SKA2-209ENST00000583976 ATP8A2Q9NTI2 1148 aa18.8■□□□□ 0.6
SKA2-209ENST00000583976 ZBTB47Q9UFB7 747 aaPredicted RBP18.8■□□□□ 0.6
SKA2-209ENST00000583976 WDR46O15213 610 aaKnown RBP18.79■□□□□ 0.6
SKA2-209ENST00000583976 MSCO60682 206 aa18.79■□□□□ 0.6
SKA2-209ENST00000583976 RTP1P59025 263 aa18.79■□□□□ 0.6
SKA2-209ENST00000583976 TMEM132BQ14DG7 1078 aa18.79■□□□□ 0.6
SKA2-209ENST00000583976 PRAMEF19Q5SWL8 479 aa18.79■□□□□ 0.6
SKA2-209ENST00000583976 TSHZ3Q63HK5 1081 aa18.79■□□□□ 0.6
SKA2-209ENST00000583976 OLFML2BQ68BL8 750 aa18.79■□□□□ 0.6
SKA2-209ENST00000583976 SLC4A4Q9Y6R1 1079 aa18.79■□□□□ 0.6
SKA2-209ENST00000583976 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
SKA2-209ENST00000583976 EEF2P13639 858 aaKnown RBP18.78■□□□□ 0.6
SKA2-209ENST00000583976 FAM47AQ5JRC9 791 aa18.78■□□□□ 0.6
SKA2-209ENST00000583976 HOXC10Q9NYD6 342 aa18.78■□□□□ 0.6
SKA2-209ENST00000583976 ZNFX1Q9P2E3 1918 aaKnown RBP18.77■□□□□ 0.6
SKA2-209ENST00000583976 UBE3CQ15386 1083 aa18.77■□□□□ 0.6
SKA2-209ENST00000583976 CTR9Q6PD62 1173 aa18.77■□□□□ 0.6
SKA2-209ENST00000583976 STK11IPQ8N1F8 1099 aa18.77■□□□□ 0.6
SKA2-209ENST00000583976 MB21D1Q8N884 522 aa18.77■□□□□ 0.6
SKA2-209ENST00000583976 MAML3Q96JK9 1138 aa18.77■□□□□ 0.6
SKA2-209ENST00000583976 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.77■□□□□ 0.6
SKA2-209ENST00000583976 SH2D4AQ9H788 454 aa18.77■□□□□ 0.6
SKA2-209ENST00000583976 ATP11BQ9Y2G3 1177 aa18.77■□□□□ 0.6
SKA2-209ENST00000583976 SEPT4O43236 478 aa18.76■□□□□ 0.59
SKA2-209ENST00000583976 RAD21O60216 631 aa18.76■□□□□ 0.59
SKA2-209ENST00000583976 PGK2P07205 417 aa18.76■□□□□ 0.59
SKA2-209ENST00000583976 FAM83BQ5T0W9 1011 aa18.76■□□□□ 0.59
SKA2-209ENST00000583976 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
SKA2-209ENST00000583976 SLC17A8Q8NDX2 589 aa18.76■□□□□ 0.59
SKA2-209ENST00000583976 LENG1Q96BZ8 264 aaPredicted RBP18.76■□□□□ 0.59
SKA2-209ENST00000583976 CCDC17Q96LX7 622 aa18.76■□□□□ 0.59
SKA2-209ENST00000583976 NUP88Q99567 741 aaPredicted RBP18.76■□□□□ 0.59
SKA2-209ENST00000583976 MROH8Q9H579 483 aa18.76■□□□□ 0.59
SKA2-209ENST00000583976 MYH4Q9Y623 1939 aa18.75■□□□□ 0.59
SKA2-209ENST00000583976 STRNO43815 780 aa18.75■□□□□ 0.59
SKA2-209ENST00000583976 TRIM60Q495X7 471 aa18.75■□□□□ 0.59
SKA2-209ENST00000583976 AMOTL1Q8IY63 956 aa18.75■□□□□ 0.59
SKA2-209ENST00000583976 MTMR10Q9NXD2 777 aa18.75■□□□□ 0.59
SKA2-209ENST00000583976 ROBO3Q96MS0 1386 aa18.75■□□□□ 0.59
SKA2-209ENST00000583976 KBTBD13C9JR72 458 aa18.74■□□□□ 0.59
SKA2-209ENST00000583976 GPR153Q6NV75 609 aa18.74■□□□□ 0.59
SKA2-209ENST00000583976 REPS2Q8NFH8 660 aa18.74■□□□□ 0.59
SKA2-209ENST00000583976 OTUD7AQ8TE49 926 aaPredicted RBP18.74■□□□□ 0.59
SKA2-209ENST00000583976 MMP19Q99542 508 aa18.74■□□□□ 0.59
SKA2-209ENST00000583976 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
SKA2-209ENST00000583976 EPB41L4AQ9HCS5 686 aaPredicted RBP18.74■□□□□ 0.59
SKA2-209ENST00000583976 PRDM5Q9NQX1 630 aaPredicted RBP18.74■□□□□ 0.59
SKA2-209ENST00000583976 ARPP21Q9UBL0 812 aaPredicted RBP18.74■□□□□ 0.59
SKA2-209ENST00000583976 ZNF214Q9UL59 606 aaPredicted RBP18.74■□□□□ 0.59
SKA2-209ENST00000583976 PPP1R9AQ9ULJ8 1098 aa18.74■□□□□ 0.59
SKA2-209ENST00000583976 FCER1AP12319 257 aa18.73■□□□□ 0.59
SKA2-209ENST00000583976 TAL1P17542 331 aaPredicted RBP18.73■□□□□ 0.59
SKA2-209ENST00000583976 RASA1P20936 1047 aa18.73■□□□□ 0.59
SKA2-209ENST00000583976 LRRC41Q15345 812 aa18.73■□□□□ 0.59
SKA2-209ENST00000583976 ABRAQ8N0Z2 381 aa18.73■□□□□ 0.59
SKA2-209ENST00000583976 FERMT2Q96AC1 680 aa18.73■□□□□ 0.59
SKA2-209ENST00000583976 DDRGK1Q96HY6 314 aa18.73■□□□□ 0.59
SKA2-209ENST00000583976 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
SKA2-209ENST00000583976 ADAMTS5Q9UNA0 930 aa18.73■□□□□ 0.59
SKA2-209ENST00000583976 SMCHD1A6NHR9 2005 aa18.73■□□□□ 0.59
SKA2-209ENST00000583976 VWA5AO00534 786 aa18.72■□□□□ 0.59
SKA2-209ENST00000583976 ADCYAP1R1P41586 468 aa18.72■□□□□ 0.59
SKA2-209ENST00000583976 SNX17Q15036 470 aa18.72■□□□□ 0.59
SKA2-209ENST00000583976 RIOX2Q8IUF8 465 aa18.72■□□□□ 0.59
SKA2-209ENST00000583976 OSBP2Q969R2 916 aa18.72■□□□□ 0.59
SKA2-209ENST00000583976 STRBPQ96SI9 672 aaKnown RBP18.72■□□□□ 0.59
SKA2-209ENST00000583976 KANSL2Q9H9L4 492 aa18.72■□□□□ 0.59
SKA2-209ENST00000583976 GOPCQ9HD26 462 aa18.72■□□□□ 0.59
SKA2-209ENST00000583976 PDLIM7Q9NR12 457 aa18.72■□□□□ 0.59
SKA2-209ENST00000583976 ECHDC1Q9NTX5 307 aa18.72■□□□□ 0.59
SKA2-209ENST00000583976 CUL9Q8IWT3 2517 aa18.72■□□□□ 0.59
SKA2-209ENST00000583976 GSG1L2A8MUP6 293 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 M0R2C6 588 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 NUCB1Q02818 461 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 C9orf50Q5SZB4 431 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 SLC39A5Q6ZMH5 540 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 SH3RF1Q7Z6J0 888 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 CHD1LQ86WJ1 897 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 ARRDC4Q8NCT1 418 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 GPATCH3Q96I76 525 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 FAM161BQ96MY7 647 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 GUCD1Q96NT3 240 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 STXBP5LQ9Y2K9 1186 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 VCANP13611 3396 aa18.71■□□□□ 0.59
SKA2-209ENST00000583976 DLL1O00548 723 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 SLC25A27O95847 323 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 NDUFB10O96000 172 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 PGK1P00558 417 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 ZNF792Q3KQV3 632 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 ZSCAN25Q6NSZ9 544 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 KBTBD3Q8NAB2 608 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 APPBP2Q92624 585 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 XPNPEP3Q9NQH7 507 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 SLC5A4Q9NY91 659 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 PRKAG2Q9UGJ0 569 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 MCM3APO60318 1980 aa18.7■□□□□ 0.58
SKA2-209ENST00000583976 PRUNE2Q8WUY3 3088 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms