RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 KLRF2D3W0D1 207 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 MYO1BO43795 1136 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 CUTAO60888 179 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 PDHBP11177 359 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 AKR1B1P15121 316 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 GPATCH4Q5T3I0 446 aaKnown RBP11.74□□□□□ -0.53
IFT20-213ENST00000583796 TMEM179Q6ZVK1 233 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 FAM83AQ86UY5 434 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 ENGASEQ8NFI3 743 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 MKL1Q969V6 931 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 TIGD1Q96MW7 591 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 FUCA2Q9BTY2 467 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 KANSL2Q9H9L4 492 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 BARHL2Q9NY43 387 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 VPS54Q9P1Q0 977 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 NYAP2Q9P242 653 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 KCNJ14Q9UNX9 436 aa11.74□□□□□ -0.53
IFT20-213ENST00000583796 ESYT2A0FGR8 921 aa11.73□□□□□ -0.53
IFT20-213ENST00000583796 UBE2Q2LH0YL09 131 aa11.73□□□□□ -0.53
IFT20-213ENST00000583796 NR1I2O75469 434 aa11.73□□□□□ -0.53
IFT20-213ENST00000583796 SNW1Q13573 536 aaKnown RBP11.73□□□□□ -0.53
IFT20-213ENST00000583796 R3HDM1Q15032 1099 aaKnown RBP11.73□□□□□ -0.53
IFT20-213ENST00000583796 AXDND1Q5T1B0 1012 aaPredicted RBP11.73□□□□□ -0.53
IFT20-213ENST00000583796 CIAPIN1Q6FI81 312 aa11.73□□□□□ -0.53
IFT20-213ENST00000583796 PPP1R18Q6NYC8 613 aa11.73□□□□□ -0.53
IFT20-213ENST00000583796 ZSCAN29Q8IWY8 852 aaPredicted RBP11.73□□□□□ -0.53
IFT20-213ENST00000583796 FSIP1Q8NA03 581 aa11.73□□□□□ -0.53
IFT20-213ENST00000583796 FAM151AQ8WW52 585 aa11.73□□□□□ -0.53
IFT20-213ENST00000583796 TNFRSF25Q93038 417 aa11.73□□□□□ -0.53
IFT20-213ENST00000583796 RRP36Q96EU6 259 aaKnown RBP11.73□□□□□ -0.53
IFT20-213ENST00000583796 PRMT6Q96LA8 375 aaPredicted RBP11.73□□□□□ -0.53
IFT20-213ENST00000583796 RIOX1Q9H6W3 641 aa11.73□□□□□ -0.53
IFT20-213ENST00000583796 SEC63Q9UGP8 760 aaKnown RBP11.73□□□□□ -0.53
IFT20-213ENST00000583796 DDTLA6NHG4 134 aaPredicted RBP11.72□□□□□ -0.53
IFT20-213ENST00000583796 TRIM75PA6NK02 468 aa11.72□□□□□ -0.53
IFT20-213ENST00000583796 TBC1D12O60347 775 aa11.72□□□□□ -0.53
IFT20-213ENST00000583796 RAD17O75943 681 aa11.72□□□□□ -0.53
IFT20-213ENST00000583796 GNA11P29992 359 aa11.72□□□□□ -0.53
IFT20-213ENST00000583796 NLRP5P59047 1200 aa11.72□□□□□ -0.53
IFT20-213ENST00000583796 CCDC173Q0VFZ6 552 aa11.72□□□□□ -0.53
IFT20-213ENST00000583796 NPY5RQ15761 445 aa11.72□□□□□ -0.53
IFT20-213ENST00000583796 CERKLQ49MI3 558 aaPredicted RBP11.72□□□□□ -0.53
IFT20-213ENST00000583796 ELOA2Q8IYF1 753 aaPredicted RBP11.72□□□□□ -0.53
IFT20-213ENST00000583796 FMR1NBQ8N0W7 255 aaPredicted RBP11.72□□□□□ -0.53
IFT20-213ENST00000583796 STAG2Q8N3U4 1231 aa11.72□□□□□ -0.53
IFT20-213ENST00000583796 KRI1Q8N9T8 703 aaKnown RBP11.72□□□□□ -0.53
IFT20-213ENST00000583796 UPF1Q92900 1129 aaKnown RBP eCLIP11.72□□□□□ -0.53
IFT20-213ENST00000583796 ZBED3Q96IU2 234 aaPredicted RBP11.72□□□□□ -0.53
IFT20-213ENST00000583796 TDRD3Q9H7E2 651 aaKnown RBP11.72□□□□□ -0.53
IFT20-213ENST00000583796 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
IFT20-213ENST00000583796 PCDHA4Q9UN74 947 aa11.72□□□□□ -0.53
IFT20-213ENST00000583796 MYH4Q9Y623 1939 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 NFKBIEO00221 500 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 CYTH3O43739 400 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 TOB1P50616 345 aaPredicted RBP11.71□□□□□ -0.53
IFT20-213ENST00000583796 CXCL9Q07325 125 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 TCP10Q12799 353 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 NR5A1Q13285 461 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 ORC2Q13416 577 aaPredicted RBP11.71□□□□□ -0.53
IFT20-213ENST00000583796 TNFAIP1Q13829 316 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 SH3BP5LQ7L8J4 393 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 TEX2Q8IWB9 1127 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 BLIDQ8IZY5 108 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 GMCL1P1Q8NEA9 526 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 DCAF4Q8WV16 495 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 DPF2Q92785 391 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 FERMT2Q96AC1 680 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 CSRNP1Q96S65 589 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 ZMYND12Q9H0C1 365 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 RBSNQ9H1K0 784 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 ZNF70Q9UC06 446 aaPredicted RBP11.71□□□□□ -0.53
IFT20-213ENST00000583796 HPSEQ9Y251 543 aa11.71□□□□□ -0.53
IFT20-213ENST00000583796 PTPREP23469 700 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 PTGER2P43116 358 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 TNNI2P48788 182 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 ZNF280AP59817 542 aaPredicted RBP11.7□□□□□ -0.54
IFT20-213ENST00000583796 ZNF543Q08ER8 600 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 RESP18Q5W5W9 173 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 SASS6Q6UVJ0 657 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 ZFPM1Q8IX07 1006 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 SHISA4Q96DD7 197 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 CCDC34Q96HJ3 373 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 PYM1Q9BRP8 204 aaKnown RBP11.7□□□□□ -0.54
IFT20-213ENST00000583796 GOLPH3LQ9H4A5 285 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 CABP5Q9NP86 173 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 CLIP2Q9UDT6 1046 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 SRPRBQ9Y5M8 271 aaKnown RBP11.7□□□□□ -0.54
IFT20-213ENST00000583796 M0R2N6 131 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 STXBP3O00186 592 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 MPHOSPH10O00566 681 aaKnown RBP11.7□□□□□ -0.54
IFT20-213ENST00000583796 CACNB3P54284 484 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 ICA1Q05084 483 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 ABCB5Q2M3G0 1257 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 RBM26Q5T8P6 1007 aaKnown RBP11.7□□□□□ -0.54
IFT20-213ENST00000583796 ARL6IP4Q66PJ3 421 aaKnown RBP11.7□□□□□ -0.54
IFT20-213ENST00000583796 WWC2Q6AWC2 1192 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 USP17L2Q6R6M4 530 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 FAM200AQ8TCP9 573 aa11.7□□□□□ -0.54
IFT20-213ENST00000583796 OXER1Q8TDS5 423 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms