RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CACNB2Q08289 660 aaPredicted RBP29.54■■■□□ 2.32
TSEN54-209ENST00000583454 APBA2Q99767 749 aa29.54■■■□□ 2.32
TSEN54-209ENST00000583454 ANAPC4Q9UJX5 808 aa29.54■■■□□ 2.32
TSEN54-209ENST00000583454 MPHOSPH10O00566 681 aaKnown RBP29.53■■■□□ 2.32
TSEN54-209ENST00000583454 EVI5O60447 810 aa29.53■■■□□ 2.32
TSEN54-209ENST00000583454 ZKSCAN1P17029 563 aaPredicted RBP29.53■■■□□ 2.32
TSEN54-209ENST00000583454 RASA1P20936 1047 aa29.53■■■□□ 2.32
TSEN54-209ENST00000583454 KIAA1755Q5JYT7 1200 aa29.53■■■□□ 2.32
TSEN54-209ENST00000583454 TRMT44Q8IYL2 757 aaKnown RBP29.53■■■□□ 2.32
TSEN54-209ENST00000583454 IL25Q9H293 177 aa29.53■■■□□ 2.32
TSEN54-209ENST00000583454 MKNK2Q9HBH9 465 aa29.53■■■□□ 2.32
TSEN54-209ENST00000583454 ZNF287Q9HBT7 754 aa29.53■■■□□ 2.32
TSEN54-209ENST00000583454 SIAH1Q8IUQ4 282 aa29.52■■■□□ 2.32
TSEN54-209ENST00000583454 STK11IPQ8N1F8 1099 aa29.52■■■□□ 2.32
TSEN54-209ENST00000583454 GREB1LQ9C091 1923 aaPredicted RBP29.51■■■□□ 2.32
TSEN54-209ENST00000583454 RAD50Q92878 1312 aa29.51■■■□□ 2.32
TSEN54-209ENST00000583454 SLC3A2P08195 630 aaKnown RBP29.51■■■□□ 2.31
TSEN54-209ENST00000583454 MAP2K5Q13163 448 aa29.51■■■□□ 2.31
TSEN54-209ENST00000583454 CCAR1Q8IX12 1150 aaKnown RBP29.51■■■□□ 2.31
TSEN54-209ENST00000583454 RUFY2Q8WXA3 655 aa29.51■■■□□ 2.31
TSEN54-209ENST00000583454 CCND3P30281 292 aaPredicted RBP29.5■■■□□ 2.31
TSEN54-209ENST00000583454 CCNA1P78396 465 aa29.5■■■□□ 2.31
TSEN54-209ENST00000583454 PDE4BQ07343 736 aa29.5■■■□□ 2.31
TSEN54-209ENST00000583454 CLEC10AQ8IUN9 316 aa29.5■■■□□ 2.31
TSEN54-209ENST00000583454 DSCC1Q9BVC3 393 aa29.5■■■□□ 2.31
TSEN54-209ENST00000583454 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.5■■■□□ 2.31
TSEN54-209ENST00000583454 FLRT1Q9NZU1 646 aa29.5■■■□□ 2.31
TSEN54-209ENST00000583454 PTPREP23469 700 aa29.49■■■□□ 2.31
TSEN54-209ENST00000583454 LHX8Q68G74 356 aa29.49■■■□□ 2.31
TSEN54-209ENST00000583454 NBPF3Q9H094 633 aa29.49■■■□□ 2.31
TSEN54-209ENST00000583454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.49■■■□□ 2.31
TSEN54-209ENST00000583454 COL11A1P12107 1806 aaPredicted RBP29.49■■■□□ 2.31
TSEN54-209ENST00000583454 PRDM1O75626 825 aa29.48■■■□□ 2.31
TSEN54-209ENST00000583454 FGRP09769 529 aa29.48■■■□□ 2.31
TSEN54-209ENST00000583454 CTDSPL2Q05D32 466 aa29.48■■■□□ 2.31
TSEN54-209ENST00000583454 GRB14Q14449 540 aa29.48■■■□□ 2.31
TSEN54-209ENST00000583454 ZNF444Q8N0Y2 327 aaPredicted RBP29.48■■■□□ 2.31
TSEN54-209ENST00000583454 PFASO15067 1338 aa29.47■■■□□ 2.31
TSEN54-209ENST00000583454 SLC15A5A6NIM6 579 aa29.47■■■□□ 2.31
TSEN54-209ENST00000583454 SGSM2O43147 1006 aa29.47■■■□□ 2.31
TSEN54-209ENST00000583454 IGHA2P01877 340 aa29.47■■■□□ 2.31
TSEN54-209ENST00000583454 HOXC6P09630 235 aa29.47■■■□□ 2.31
TSEN54-209ENST00000583454 KANSL2Q9H9L4 492 aa29.47■■■□□ 2.31
TSEN54-209ENST00000583454 TACC3Q9Y6A5 838 aa29.47■■■□□ 2.31
TSEN54-209ENST00000583454 C11orf49Q9H6J7 331 aa29.46■■■□□ 2.31
TSEN54-209ENST00000583454 ZNFX1Q9P2E3 1918 aaKnown RBP29.45■■■□□ 2.31
TSEN54-209ENST00000583454 COL6A1P12109 1028 aa29.45■■■□□ 2.31
TSEN54-209ENST00000583454 ICA1Q05084 483 aa29.45■■■□□ 2.31
TSEN54-209ENST00000583454 COG2Q14746 738 aa29.45■■■□□ 2.31
TSEN54-209ENST00000583454 TMX2Q9Y320 296 aa29.45■■■□□ 2.31
TSEN54-209ENST00000583454 IGKV6D-41A0A0C4DH26 115 aa29.44■■■□□ 2.3
TSEN54-209ENST00000583454 ORC4O43929 436 aa29.44■■■□□ 2.3
TSEN54-209ENST00000583454 WDR78Q5VTH9 848 aa29.44■■■□□ 2.3
TSEN54-209ENST00000583454 C7orf61Q8IZ16 206 aa29.44■■■□□ 2.3
TSEN54-209ENST00000583454 NPLOC4Q8TAT6 608 aa29.44■■■□□ 2.3
TSEN54-209ENST00000583454 MOV10L1Q9BXT6 1211 aaKnown RBP29.44■■■□□ 2.3
TSEN54-209ENST00000583454 CWC22Q9HCG8 908 aaKnown RBP29.44■■■□□ 2.3
TSEN54-209ENST00000583454 INCENPQ9NQS7 918 aa29.44■■■□□ 2.3
TSEN54-209ENST00000583454 NEDD1Q8NHV4 660 aa29.43■■■□□ 2.3
TSEN54-209ENST00000583454 TANGO6Q9C0B7 1094 aa29.43■■■□□ 2.3
TSEN54-209ENST00000583454 ARHGEF10LQ9HCE6 1279 aa29.43■■■□□ 2.3
TSEN54-209ENST00000583454 CTNNA3Q9UI47 895 aa29.43■■■□□ 2.3
TSEN54-209ENST00000583454 PLIN4Q96Q06 1357 aa29.42■■■□□ 2.3
TSEN54-209ENST00000583454 HAND2P61296 217 aa29.42■■■□□ 2.3
TSEN54-209ENST00000583454 LPAR1Q92633 364 aa29.42■■■□□ 2.3
TSEN54-209ENST00000583454 GDF15Q99988 308 aa29.42■■■□□ 2.3
TSEN54-209ENST00000583454 VCPKMTQ9H867 229 aa29.42■■■□□ 2.3
TSEN54-209ENST00000583454 HOXC10Q9NYD6 342 aa29.42■■■□□ 2.3
TSEN54-209ENST00000583454 LAMA4Q16363 1823 aa29.41■■■□□ 2.3
TSEN54-209ENST00000583454 A0A1W2PPC1 479 aa29.41■■■□□ 2.3
TSEN54-209ENST00000583454 EEF2P13639 858 aaKnown RBP29.41■■■□□ 2.3
TSEN54-209ENST00000583454 DSG3P32926 999 aa29.41■■■□□ 2.3
TSEN54-209ENST00000583454 TFAP4Q01664 338 aa29.41■■■□□ 2.3
TSEN54-209ENST00000583454 SPATC1LQ9H0A9 340 aa29.41■■■□□ 2.3
TSEN54-209ENST00000583454 IVNS1ABPQ9Y6Y0 642 aa29.41■■■□□ 2.3
TSEN54-209ENST00000583454 LAMA2P24043 3122 aaKnown RBP29.4■■■□□ 2.3
TSEN54-209ENST00000583454 ZNF213O14771 459 aa29.4■■■□□ 2.3
TSEN54-209ENST00000583454 PCP11498 1178 aaKnown RBP29.4■■■□□ 2.3
TSEN54-209ENST00000583454 PTH1RQ03431 593 aa29.4■■■□□ 2.3
TSEN54-209ENST00000583454 FAM47AQ5JRC9 791 aa29.4■■■□□ 2.3
TSEN54-209ENST00000583454 SPICE1Q8N0Z3 855 aa29.4■■■□□ 2.3
TSEN54-209ENST00000583454 TRPV1Q8NER1 839 aa29.4■■■□□ 2.3
TSEN54-209ENST00000583454 STAG1Q8WVM7 1258 aa29.4■■■□□ 2.3
TSEN54-209ENST00000583454 SH2D4AQ9H788 454 aa29.4■■■□□ 2.3
TSEN54-209ENST00000583454 NYAP2Q9P242 653 aa29.4■■■□□ 2.3
TSEN54-209ENST00000583454 ZMYND8Q9ULU4 1186 aaPredicted RBP29.4■■■□□ 2.3
TSEN54-209ENST00000583454 TSPY3P0CV98 308 aa29.39■■■□□ 2.3
TSEN54-209ENST00000583454 TSPY8P0CW00 308 aa29.39■■■□□ 2.3
TSEN54-209ENST00000583454 AKNAD1Q5T1N1 836 aa29.39■■■□□ 2.3
TSEN54-209ENST00000583454 MFSD14CQ5VZR4 134 aa29.39■■■□□ 2.3
TSEN54-209ENST00000583454 TBC1D10CQ8IV04 446 aa29.39■■■□□ 2.3
TSEN54-209ENST00000583454 SHCBP1Q8NEM2 672 aa29.39■■■□□ 2.3
TSEN54-209ENST00000583454 ATG4CQ96DT6 458 aa29.39■■■□□ 2.3
TSEN54-209ENST00000583454 ESYT1Q9BSJ8 1104 aa29.39■■■□□ 2.3
TSEN54-209ENST00000583454 COL6A3P12111 3177 aa29.39■■■□□ 2.29
TSEN54-209ENST00000583454 ERCC3P19447 782 aa29.38■■■□□ 2.29
TSEN54-209ENST00000583454 CYP2C19P33261 490 aa29.38■■■□□ 2.29
TSEN54-209ENST00000583454 MKL1Q969V6 931 aa29.38■■■□□ 2.29
TSEN54-209ENST00000583454 MTMR4Q9NYA4 1195 aa29.38■■■□□ 2.29
TSEN54-209ENST00000583454 WDR46O15213 610 aaKnown RBP29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms