RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	PNISR	Q8TF01	805 aa	Known RBP	10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	PNMA5	Q96PV4	448 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	KDM3B	Q7LBC6	1761 aa		10.14	□□□□□ -0.79
NCOR1-223	ENST00000583226	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	SIN3B	O75182	1162 aa		10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	ZBTB48	P10074	688 aa	Predicted RBP	10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	EIF4A1	P60842	406 aa	Known RBP	10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	OCLN	Q16625	522 aa		10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	SLC4A8	Q2Y0W8	1093 aa		10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	C11orf91	Q3C1V1	193 aa		10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	SLC9C1	Q4G0N8	1177 aa		10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	HSP90AB3P	Q58FF7	597 aa		10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	IER5	Q5VY09	327 aa		10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	CELF1	Q92879	486 aa	Known RBP	10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	C1orf115	Q9H7X2	142 aa		10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	PODXL2	Q9NZ53	605 aa		10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	TRMT112	Q9UI30	125 aa	Known RBP	10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226	SCAF8	Q9UPN6	1271 aa	Known RBP	10.13	□□□□□ -0.79
NCOR1-223	ENST00000583226		A0A1W2PPC1	479 aa		10.12	□□□□□ -0.79
NCOR1-223	ENST00000583226	HSPA5	P11021	654 aa	Known RBP	10.12	□□□□□ -0.79
NCOR1-223	ENST00000583226	EPB42	P16452	691 aa		10.12	□□□□□ -0.79
NCOR1-223	ENST00000583226	SP3	Q02447	781 aa		10.12	□□□□□ -0.79
NCOR1-223	ENST00000583226	CRHR2	Q13324	411 aa		10.12	□□□□□ -0.79
NCOR1-223	ENST00000583226	SF3B3	Q15393	1217 aa	Known RBP	10.12	□□□□□ -0.79
NCOR1-223	ENST00000583226	NBPF9	Q3BBW0	867 aa		10.12	□□□□□ -0.79
NCOR1-223	ENST00000583226	IFT43	Q96FT9	208 aa		10.12	□□□□□ -0.79
NCOR1-223	ENST00000583226	LRFN2	Q9ULH4	789 aa		10.12	□□□□□ -0.79
NCOR1-223	ENST00000583226	MICAL2	O94851	1124 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	HOXB4	P17483	251 aa	Predicted RBP	10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	CAP1	Q01518	475 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	NAA30	Q147X3	362 aa	Predicted RBP	10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	ARHGEF6	Q15052	776 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	CC2D1B	Q5T0F9	858 aa	Known RBP	10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	OTUD7B	Q6GQQ9	843 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	GPAT2	Q6NUI2	795 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	LINC00114	Q6XXX2	140 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	KRT25	Q7Z3Z0	450 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	DPF3	Q92784	378 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	UBE2O	Q9C0C9	1292 aa	Known RBP	10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	SUV39H2	Q9H5I1	410 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	DMGDH	Q9UI17	866 aa	Known RBP	10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	PSME4	Q14997	1843 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	LAMB1	P07942	1786 aa		10.11	□□□□□ -0.79
NCOR1-223	ENST00000583226	UNCX	A6NJT0	531 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	WNT10B	O00744	389 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	GNB5	O14775	395 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	ADH7	P40394	386 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	DGKG	P49619	791 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	MMP14	P50281	582 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	RPS8	P62241	208 aa	Known RBP	10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	MAP3K11	Q16584	847 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	COX20	Q5RI15	118 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	CAPN12	Q6ZSI9	719 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	MYO19	Q96H55	970 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	USP20	Q9Y2K6	914 aa		10.1	□□□□□ -0.79
NCOR1-223	ENST00000583226	PIK3R2	O00459	728 aa		10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	UFL1	O94874	794 aa		10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	NFKB1	P19838	968 aa		10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	INPP5B	P32019	993 aa		10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	ARSD	P51689	593 aa		10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	CCIN	Q13939	588 aa		10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	PRKG1	Q13976	671 aa		10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	WNK4	Q96J92	1243 aa		10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	THUMPD2	Q9BTF0	503 aa	Known RBP	10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	SAP130	Q9H0E3	1048 aa		10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	ANGEL1	Q9UNK9	670 aa	Known RBP	10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	PTCH2	Q9Y6C5	1203 aa		10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.09	□□□□□ -0.79
NCOR1-223	ENST00000583226	WTIP	A6NIX2	430 aa	Predicted RBP	10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	SOX1	O00570	391 aa	Predicted RBP	10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	C16orf46	Q6P387	395 aa		10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	UBE2Q1	Q7Z7E8	422 aa		10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	TREML1	Q86YW5	311 aa		10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	TNFRSF25	Q93038	417 aa		10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	GSX2	Q9BZM3	304 aa		10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	NUDC	Q9Y266	331 aa		10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	NR2E3	Q9Y5X4	410 aa		10.08	□□□□□ -0.8
NCOR1-223	ENST00000583226	COL4A1	P02462	1669 aa		10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	COL1A1	P02452	1464 aa	Predicted RBP	10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	ADARB2-AS1	A8MUL3	147 aa		10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	PROSER3	Q2NL68	480 aa		10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	COPS6	Q7L5N1	327 aa		10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	RGL4	Q8IZJ4	473 aa		10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	CLP1	Q92989	425 aa	Known RBP	10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	SHISA4	Q96DD7	197 aa		10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	CLMN	Q96JQ2	1002 aa		10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	CFAP53	Q96M91	514 aa		10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	PTPN18	Q99952	460 aa		10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226	HTATIP2	Q9BUP3	242 aa		10.07	□□□□□ -0.8
NCOR1-223	ENST00000583226		M0R082	166 aa		10.06	□□□□□ -0.8
NCOR1-223	ENST00000583226	ATP2B4	P23634	1241 aa		10.06	□□□□□ -0.8
NCOR1-223	ENST00000583226	COL8A1	P27658	744 aa		10.06	□□□□□ -0.8
NCOR1-223	ENST00000583226	GRN	P28799	593 aa	Known RBP	10.06	□□□□□ -0.8
NCOR1-223	ENST00000583226	CMTR1	Q8N1G2	835 aa	Known RBP	10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms