RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 PTPRCP08575 1304 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 FAM196BA6NMK8 535 aa8.96□□□□□ -0.98
NF1-222ENST00000582892 ITGB8P26012 769 aa8.96□□□□□ -0.98
NF1-222ENST00000582892 RBM25P49756 843 aaKnown RBP8.96□□□□□ -0.98
NF1-222ENST00000582892 SMAD3P84022 425 aaKnown RBP8.96□□□□□ -0.98
NF1-222ENST00000582892 UBE4AQ14139 1066 aa8.96□□□□□ -0.98
NF1-222ENST00000582892 DESI1Q6ICB0 168 aa8.96□□□□□ -0.98
NF1-222ENST00000582892 ANTXR1Q9H6X2 564 aa8.96□□□□□ -0.98
NF1-222ENST00000582892 TXNRD2Q9NNW7 524 aa8.96□□□□□ -0.98
NF1-222ENST00000582892 PRDM5Q9NQX1 630 aaPredicted RBP8.96□□□□□ -0.98
NF1-222ENST00000582892 PICK1Q9NRD5 415 aa8.96□□□□□ -0.98
NF1-222ENST00000582892 SYNGAP1Q96PV0 1343 aa8.96□□□□□ -0.98
NF1-222ENST00000582892 DDTLA6NHG4 134 aaPredicted RBP8.95□□□□□ -0.98
NF1-222ENST00000582892 ZBTB24O43167 697 aaPredicted RBP8.95□□□□□ -0.98
NF1-222ENST00000582892 FRAT2O75474 233 aaPredicted RBP8.95□□□□□ -0.98
NF1-222ENST00000582892 JUNDP17535 347 aa8.95□□□□□ -0.98
NF1-222ENST00000582892 HMGCS2P54868 508 aa8.95□□□□□ -0.98
NF1-222ENST00000582892 CCDC85BQ15834 202 aaPredicted RBP8.95□□□□□ -0.98
NF1-222ENST00000582892 TAF7LQ5H9L4 462 aa8.95□□□□□ -0.98
NF1-222ENST00000582892 HHIPL2Q6UWX4 724 aa8.95□□□□□ -0.98
NF1-222ENST00000582892 SNX21Q969T3 373 aa8.95□□□□□ -0.98
NF1-222ENST00000582892 PCMTD1Q96MG8 357 aaPredicted RBP8.95□□□□□ -0.98
NF1-222ENST00000582892 ASB2Q96Q27 587 aa8.95□□□□□ -0.98
NF1-222ENST00000582892 C22orf23Q9BZE7 217 aa8.95□□□□□ -0.98
NF1-222ENST00000582892 ASCC2Q9H1I8 757 aaPredicted RBP8.95□□□□□ -0.98
NF1-222ENST00000582892 POLR3EQ9NVU0 708 aa8.95□□□□□ -0.98
NF1-222ENST00000582892 FLRT1Q9NZU1 646 aa8.95□□□□□ -0.98
NF1-222ENST00000582892 CACNA1FO60840 1977 aa8.95□□□□□ -0.98
NF1-222ENST00000582892 CFAP54Q96N23 3096 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 SIPA1L1O43166 1804 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 TRIM43BA6NCK2 446 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 F6X3S4 739 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 DXOO77932 396 aaKnown RBP8.94□□□□□ -0.98
NF1-222ENST00000582892 ZKSCAN1P17029 563 aaPredicted RBP8.94□□□□□ -0.98
NF1-222ENST00000582892 PRDX5P30044 214 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 RRP1BQ14684 758 aaKnown RBP8.94□□□□□ -0.98
NF1-222ENST00000582892 CSPP1Q1MSJ5 1256 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 LRRC24Q50LG9 513 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 ALYREFQ86V81 257 aaKnown RBP8.94□□□□□ -0.98
NF1-222ENST00000582892 VPS37DQ86XT2 251 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 RPAP2Q8IXW5 612 aaPredicted RBP8.94□□□□□ -0.98
NF1-222ENST00000582892 IL27Q8NEV9 243 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 PRR7Q8TB68 274 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 TBC1D22AQ8WUA7 517 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 DNAAF4Q8WXU2 420 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 USP6NLQ92738 828 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 TRIM43Q96BQ3 446 aaPredicted RBP8.94□□□□□ -0.98
NF1-222ENST00000582892 LRFN3Q9BTN0 628 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 PRKD2Q9BZL6 878 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 PORCNQ9H237 461 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 EPHX3Q9H6B9 360 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 DDX4Q9NQI0 724 aaKnown RBP8.94□□□□□ -0.98
NF1-222ENST00000582892 PDLIM7Q9NR12 457 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 FCF1Q9Y324 198 aaKnown RBP8.94□□□□□ -0.98
NF1-222ENST00000582892 RFX7Q2KHR2 1363 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 TRIOO75962 3097 aa8.94□□□□□ -0.98
NF1-222ENST00000582892 BRWD1Q9NSI6 2320 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 FLIIQ13045 1269 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 SPP2Q13103 211 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 ADGRE1Q14246 886 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 CCDC57Q2TAC2 916 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 TRIM60Q495X7 471 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 GJC2Q5T442 439 aaPredicted RBP8.93□□□□□ -0.98
NF1-222ENST00000582892 ANO1Q5XXA6 986 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 LINS1Q8NG48 757 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 MRIQ9BWK5 157 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 PRDM12Q9H4Q4 367 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 DCTPP1Q9H773 170 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 USP40Q9NVE5 1235 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 THEGQ9P2T0 379 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 PRKAG2Q9UGJ0 569 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 LIMD1Q9UGP4 676 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 NDUFB9Q9Y6M9 179 aa8.93□□□□□ -0.98
NF1-222ENST00000582892 PRRC2BQ5JSZ5 2229 aaKnown RBP8.92□□□□□ -0.98
NF1-222ENST00000582892 SMCHD1A6NHR9 2005 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 GCLCP48506 637 aaPredicted RBP8.92□□□□□ -0.98
NF1-222ENST00000582892 RPIAP49247 311 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 TFF2Q03403 129 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 FKBP5Q13451 457 aaPredicted RBP8.92□□□□□ -0.98
NF1-222ENST00000582892 SHROOM1Q2M3G4 852 aaPredicted RBP8.92□□□□□ -0.98
NF1-222ENST00000582892 ANKRD44Q8N8A2 993 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 VGLL2Q8N8G2 317 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 TRPV1Q8NER1 839 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 KAZALD1Q96I82 304 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 SNX27Q96L92 541 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 RNPC3Q96LT9 517 aaKnown RBP8.92□□□□□ -0.98
NF1-222ENST00000582892 P2RX7Q99572 595 aaKnown RBP8.92□□□□□ -0.98
NF1-222ENST00000582892 NUDT12Q9BQG2 462 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 ZNF576Q9H609 170 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 PRDM9Q9NQV7 894 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 MORF4L1Q9UBU8 362 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 LRRFIP2Q9Y608 721 aaKnown RBP8.92□□□□□ -0.98
NF1-222ENST00000582892 SPTBN4Q9H254 2564 aa8.92□□□□□ -0.98
NF1-222ENST00000582892 MAST3O60307 1309 aa8.91□□□□□ -0.98
NF1-222ENST00000582892 FAM86C2PA6NEL3 165 aa8.91□□□□□ -0.98
NF1-222ENST00000582892 GRXCR1A8MXD5 290 aa8.91□□□□□ -0.98
NF1-222ENST00000582892 LILRB3O75022 631 aa8.91□□□□□ -0.98
NF1-222ENST00000582892 SLC19A1P41440 591 aa8.91□□□□□ -0.98
NF1-222ENST00000582892 KCNQ1P51787 676 aa8.91□□□□□ -0.98
NF1-222ENST00000582892 MAP3K10Q02779 954 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms