RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 PPP4R3BQ5MIZ7 849 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 IQCA1Q86XH1 822 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 CHMP4CQ96CF2 233 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 GMCL1Q96IK5 515 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 BTBD7Q9P203 1132 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 ADAMTS5Q9UNA0 930 aa19.32■□□□□ 0.68
RNF43-206ENST00000582293 MCCP23508 829 aa19.31■□□□□ 0.68
RNF43-206ENST00000582293 GCLCP48506 637 aaPredicted RBP19.31■□□□□ 0.68
RNF43-206ENST00000582293 TRDNQ13061 729 aa19.31■□□□□ 0.68
RNF43-206ENST00000582293 FAM110CQ1W6H9 321 aa19.31■□□□□ 0.68
RNF43-206ENST00000582293 C8orf34Q49A92 452 aa19.31■□□□□ 0.68
RNF43-206ENST00000582293 ATG4CQ96DT6 458 aa19.31■□□□□ 0.68
RNF43-206ENST00000582293 GPHNQ9NQX3 736 aaPredicted RBP19.31■□□□□ 0.68
RNF43-206ENST00000582293 SNX14Q9Y5W7 946 aa19.31■□□□□ 0.68
RNF43-206ENST00000582293 EPB41L2O43491 1005 aaKnown RBP19.3■□□□□ 0.68
RNF43-206ENST00000582293 FLOT1O75955 427 aa19.3■□□□□ 0.68
RNF43-206ENST00000582293 SNHG28P0DPA3 235 aa19.3■□□□□ 0.68
RNF43-206ENST00000582293 BMP3P12645 472 aa19.3■□□□□ 0.68
RNF43-206ENST00000582293 RALYLQ86SE5 291 aaKnown RBP19.3■□□□□ 0.68
RNF43-206ENST00000582293 IGDCC4Q8TDY8 1250 aa19.3■□□□□ 0.68
RNF43-206ENST00000582293 COL11A1P12107 1806 aaPredicted RBP19.3■□□□□ 0.68
RNF43-206ENST00000582293 MYPNQ86TC9 1320 aa19.29■□□□□ 0.68
RNF43-206ENST00000582293 MGAMO43451 1857 aa19.29■□□□□ 0.68
RNF43-206ENST00000582293 ECM2O94769 699 aaPredicted RBP19.29■□□□□ 0.68
RNF43-206ENST00000582293 PDHBP11177 359 aa19.29■□□□□ 0.68
RNF43-206ENST00000582293 RNF20Q5VTR2 975 aa19.29■□□□□ 0.68
RNF43-206ENST00000582293 REPS2Q8NFH8 660 aa19.29■□□□□ 0.68
RNF43-206ENST00000582293 ERO1AQ96HE7 468 aa19.29■□□□□ 0.68
RNF43-206ENST00000582293 UBAC1Q9BSL1 405 aa19.29■□□□□ 0.68
RNF43-206ENST00000582293 PPP1R9AQ9ULJ8 1098 aa19.29■□□□□ 0.68
RNF43-206ENST00000582293 MTMR7Q9Y216 660 aa19.29■□□□□ 0.68
RNF43-206ENST00000582293 SLC1A4P43007 532 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 ERVK-9P63128 1117 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 ERVK-24P63145 666 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 CCDC178Q5BJE1 867 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 KCTD1Q719H9 257 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 OTOP1Q7RTM1 612 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 PNMA1Q8ND90 353 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 GTF3C2Q8WUA4 911 aaPredicted RBP19.28■□□□□ 0.68
RNF43-206ENST00000582293 DCAF4Q8WV16 495 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 TRIM47Q96LD4 638 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 PAGR1Q9BTK6 254 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 HOXC10Q9NYD6 342 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 RABGAP1Q9Y3P9 1069 aa19.28■□□□□ 0.68
RNF43-206ENST00000582293 PRC1O43663 620 aa19.27■□□□□ 0.68
RNF43-206ENST00000582293 EXOSC10Q01780 885 aaKnown RBP19.27■□□□□ 0.68
RNF43-206ENST00000582293 TTBK2Q6IQ55 1244 aa19.27■□□□□ 0.68
RNF43-206ENST00000582293 NEK1Q96PY6 1258 aa19.27■□□□□ 0.68
RNF43-206ENST00000582293 SLF1Q9BQI6 1058 aa19.27■□□□□ 0.68
RNF43-206ENST00000582293 PORCNQ9H237 461 aa19.27■□□□□ 0.68
RNF43-206ENST00000582293 FRMPD2Q68DX3 1309 aaPredicted RBP19.26■□□□□ 0.67
RNF43-206ENST00000582293 PLXNB2O15031 1838 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 TMEM232C9JQI7 657 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 VWA5AO00534 786 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 IFIT3O14879 490 aaKnown RBP19.26■□□□□ 0.67
RNF43-206ENST00000582293 CPA1P15085 419 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 MCM5P33992 734 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 PSMC4P43686 418 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 TMEM132BQ14DG7 1078 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 IFIT1BQ5T764 474 aaKnown RBP19.26■□□□□ 0.67
RNF43-206ENST00000582293 CTU1Q7Z7A3 348 aaKnown RBP19.26■□□□□ 0.67
RNF43-206ENST00000582293 GPRC5AQ8NFJ5 357 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 LRRC2Q9BYS8 371 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 KAT14Q9H8E8 782 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 LY9Q9HBG7 655 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 FEM1BQ9UK73 627 aa19.26■□□□□ 0.67
RNF43-206ENST00000582293 SH2B2O14492 632 aaPredicted RBP19.25■□□□□ 0.67
RNF43-206ENST00000582293 PLA2G6O60733 806 aa19.25■□□□□ 0.67
RNF43-206ENST00000582293 ZKSCAN1P17029 563 aaPredicted RBP19.25■□□□□ 0.67
RNF43-206ENST00000582293 ZNF543Q08ER8 600 aa19.25■□□□□ 0.67
RNF43-206ENST00000582293 TMEM67Q5HYA8 995 aa19.25■□□□□ 0.67
RNF43-206ENST00000582293 SAMD1Q6SPF0 538 aaPredicted RBP19.25■□□□□ 0.67
RNF43-206ENST00000582293 BTNL9Q6UXG8 535 aa19.25■□□□□ 0.67
RNF43-206ENST00000582293 PRPF38AQ8NAV1 312 aaKnown RBP19.25■□□□□ 0.67
RNF43-206ENST00000582293 TCEANC2Q96MN5 208 aa19.25■□□□□ 0.67
RNF43-206ENST00000582293 MTA3Q9BTC8 594 aa19.25■□□□□ 0.67
RNF43-206ENST00000582293 ZNF214Q9UL59 606 aaPredicted RBP19.25■□□□□ 0.67
RNF43-206ENST00000582293 HTTP42858 3142 aa19.24■□□□□ 0.67
RNF43-206ENST00000582293 GOLGA8HP0CJ92 632 aa19.24■□□□□ 0.67
RNF43-206ENST00000582293 KRT32Q14532 448 aa19.24■□□□□ 0.67
RNF43-206ENST00000582293 WTAPQ15007 396 aa19.24■□□□□ 0.67
RNF43-206ENST00000582293 KIFC2Q96AC6 838 aa19.24■□□□□ 0.67
RNF43-206ENST00000582293 EFCC1Q9HA90 598 aa19.24■□□□□ 0.67
RNF43-206ENST00000582293 SLC38A10Q9HBR0 1119 aa19.24■□□□□ 0.67
RNF43-206ENST00000582293 GPCPD1Q9NPB8 672 aa19.24■□□□□ 0.67
RNF43-206ENST00000582293 TRIM17Q9Y577 477 aa19.24■□□□□ 0.67
RNF43-206ENST00000582293 SLC16A2P36021 539 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 STAT2P52630 851 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 TROAPQ12815 778 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 CCDC96Q2M329 555 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 DHX32Q7L7V1 743 aaKnown RBP19.23■□□□□ 0.67
RNF43-206ENST00000582293 MB21D1Q8N884 522 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 TMEM87BQ96K49 555 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 JAKMIP1Q96N16 626 aaKnown RBP19.23■□□□□ 0.67
RNF43-206ENST00000582293 MOV10L1Q9BXT6 1211 aaKnown RBP19.23■□□□□ 0.67
RNF43-206ENST00000582293 MCOLN1Q9GZU1 580 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 SPATC1LQ9H0A9 340 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 CPVLQ9H3G5 476 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 PRR12Q9ULL5 1215 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 GABRQQ9UN88 632 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms