RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ELOA2Q8IYF1 753 aaPredicted RBP25.94■■□□□ 1.74
CCDC47-204ENST00000582252 USP40Q9NVE5 1235 aa25.94■■□□□ 1.74
CCDC47-204ENST00000582252 MAD2L2Q9UI95 211 aa25.94■■□□□ 1.74
CCDC47-204ENST00000582252 FBXO2Q9UK22 296 aaPredicted RBP25.94■■□□□ 1.74
CCDC47-204ENST00000582252 PCDHB6Q9Y5E3 794 aa25.94■■□□□ 1.74
CCDC47-204ENST00000582252 SRPRBQ9Y5M8 271 aaKnown RBP25.94■■□□□ 1.74
CCDC47-204ENST00000582252 BECN2A8MW95 431 aa25.94■■□□□ 1.74
CCDC47-204ENST00000582252 TOP1P11387 765 aaKnown RBP25.94■■□□□ 1.74
CCDC47-204ENST00000582252 OGFOD1Q8N543 542 aa25.94■■□□□ 1.74
CCDC47-204ENST00000582252 CCDC148Q8NFR7 591 aa25.94■■□□□ 1.74
CCDC47-204ENST00000582252 SHISA4Q96DD7 197 aa25.94■■□□□ 1.74
CCDC47-204ENST00000582252 KCNH3Q9ULD8 1083 aa25.94■■□□□ 1.74
CCDC47-204ENST00000582252 YBX3P16989 372 aaKnown RBP eCLIP25.93■■□□□ 1.74
CCDC47-204ENST00000582252 PICALMQ13492 652 aa25.93■■□□□ 1.74
CCDC47-204ENST00000582252 APOBEC3HQ6NTF7 200 aaKnown RBP25.93■■□□□ 1.74
CCDC47-204ENST00000582252 CLIC6Q96NY7 704 aa25.93■■□□□ 1.74
CCDC47-204ENST00000582252 PALM3A6NDB9 673 aaPredicted RBP25.92■■□□□ 1.74
CCDC47-204ENST00000582252 HLA-DOAP06340 250 aa25.92■■□□□ 1.74
CCDC47-204ENST00000582252 MMP14P50281 582 aa25.92■■□□□ 1.74
CCDC47-204ENST00000582252 RBM5P52756 815 aaKnown RBP eCLIP25.92■■□□□ 1.74
CCDC47-204ENST00000582252 IQCB1Q15051 598 aa25.92■■□□□ 1.74
CCDC47-204ENST00000582252 GALNT17Q6IS24 598 aa25.92■■□□□ 1.74
CCDC47-204ENST00000582252 C11orf57Q6ZUT1 292 aaPredicted RBP25.92■■□□□ 1.74
CCDC47-204ENST00000582252 TNFRSF25Q93038 417 aa25.92■■□□□ 1.74
CCDC47-204ENST00000582252 RPS12P25398 132 aaKnown RBP25.91■■□□□ 1.74
CCDC47-204ENST00000582252 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.91■■□□□ 1.74
CCDC47-204ENST00000582252 CCDC34Q96HJ3 373 aa25.91■■□□□ 1.74
CCDC47-204ENST00000582252 BPIFA3Q9BQP9 254 aa25.91■■□□□ 1.74
CCDC47-204ENST00000582252 ZBTB12Q9Y330 459 aaPredicted RBP25.91■■□□□ 1.74
CCDC47-204ENST00000582252 PARP1P09874 1014 aaKnown RBP25.91■■□□□ 1.74
CCDC47-204ENST00000582252 ATP2B1P20020 1258 aa25.91■■□□□ 1.74
CCDC47-204ENST00000582252 SMARCA1P28370 1054 aa25.91■■□□□ 1.74
CCDC47-204ENST00000582252 NOVP48745 357 aa25.91■■□□□ 1.74
CCDC47-204ENST00000582252 NLRP12P59046 1061 aa25.91■■□□□ 1.74
CCDC47-204ENST00000582252 CNNM3Q8NE01 707 aa25.91■■□□□ 1.74
CCDC47-204ENST00000582252 FERMT2Q96AC1 680 aa25.91■■□□□ 1.74
CCDC47-204ENST00000582252 SPZ1Q9BXG8 430 aa25.91■■□□□ 1.74
CCDC47-204ENST00000582252 GABPAQ06546 454 aa25.9■■□□□ 1.74
CCDC47-204ENST00000582252 NPY5RQ15761 445 aa25.9■■□□□ 1.74
CCDC47-204ENST00000582252 CFAP100Q494V2 611 aa25.9■■□□□ 1.74
CCDC47-204ENST00000582252 PPP4R3BQ5MIZ7 849 aa25.9■■□□□ 1.74
CCDC47-204ENST00000582252 CDC42EP5Q6NZY7 148 aa25.9■■□□□ 1.74
CCDC47-204ENST00000582252 STAG2Q8N3U4 1231 aa25.9■■□□□ 1.74
CCDC47-204ENST00000582252 OSBPL5Q9H0X9 879 aaPredicted RBP25.9■■□□□ 1.74
CCDC47-204ENST00000582252 AP5Z1O43299 807 aa25.89■■□□□ 1.74
CCDC47-204ENST00000582252 TTC38Q5R3I4 469 aa25.89■■□□□ 1.74
CCDC47-204ENST00000582252 KRBA2Q6ZNG9 492 aa25.89■■□□□ 1.74
CCDC47-204ENST00000582252 CCDC12Q8WUD4 166 aaPredicted RBP25.89■■□□□ 1.74
CCDC47-204ENST00000582252 SERPINB13Q9UIV8 391 aa25.89■■□□□ 1.74
CCDC47-204ENST00000582252 KANK3Q6NY19 840 aa25.88■■□□□ 1.73
CCDC47-204ENST00000582252 SARM1Q6SZW1 724 aa25.88■■□□□ 1.73
CCDC47-204ENST00000582252 BLIDQ8IZY5 108 aa25.88■■□□□ 1.73
CCDC47-204ENST00000582252 CEP95Q96GE4 821 aa25.88■■□□□ 1.73
CCDC47-204ENST00000582252 TRIM5Q9C035 493 aa25.88■■□□□ 1.73
CCDC47-204ENST00000582252 PCDHA4Q9UN74 947 aa25.88■■□□□ 1.73
CCDC47-204ENST00000582252 ZNF500O60304 480 aaPredicted RBP25.88■■□□□ 1.73
CCDC47-204ENST00000582252 TPM4P67936 248 aa25.88■■□□□ 1.73
CCDC47-204ENST00000582252 PIBF1Q8WXW3 757 aa25.88■■□□□ 1.73
CCDC47-204ENST00000582252 TUBE1Q9UJT0 475 aa25.88■■□□□ 1.73
CCDC47-204ENST00000582252 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.87■■□□□ 1.73
CCDC47-204ENST00000582252 KLRF2D3W0D1 207 aa25.87■■□□□ 1.73
CCDC47-204ENST00000582252 DAGLBQ8NCG7 672 aa25.87■■□□□ 1.73
CCDC47-204ENST00000582252 DDX4Q9NQI0 724 aaKnown RBP25.87■■□□□ 1.73
CCDC47-204ENST00000582252 EHD4Q9H223 541 aa25.86■■□□□ 1.73
CCDC47-204ENST00000582252 SMTNL1A8MU46 457 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 ZNF75DP51815 510 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 DLGAP5Q15398 846 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 EARS2Q5JPH6 523 aaKnown RBP25.85■■□□□ 1.73
CCDC47-204ENST00000582252 PLA2G4DQ86XP0 818 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 MTMR14Q8NCE2 650 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 DPF2Q92785 391 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 DHX36Q9H2U1 1008 aaKnown RBP25.85■■□□□ 1.73
CCDC47-204ENST00000582252 BARHL2Q9NY43 387 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 PCDHAC2Q9Y5I4 1007 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 ZNF541Q9H0D2 1346 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 FAM205CA6NFA0 338 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 SPDYE2BA6NHP3 402 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 SPDYE6P0CI01 402 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 CDC25BP30305 580 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 GPR162Q16538 588 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 PIK3AP1Q6ZUJ8 805 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 DHX40Q8IX18 779 aaKnown RBP25.85■■□□□ 1.73
CCDC47-204ENST00000582252 ERCC4Q92889 916 aaPredicted RBP25.85■■□□□ 1.73
CCDC47-204ENST00000582252 RRP36Q96EU6 259 aaKnown RBP25.85■■□□□ 1.73
CCDC47-204ENST00000582252 MTMR4Q9NYA4 1195 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.85■■□□□ 1.73
CCDC47-204ENST00000582252 SEC63Q9UGP8 760 aaKnown RBP25.85■■□□□ 1.73
CCDC47-204ENST00000582252 MTMR7Q9Y216 660 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 GJA3Q9Y6H8 435 aa25.85■■□□□ 1.73
CCDC47-204ENST00000582252 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.85■■□□□ 1.73
CCDC47-204ENST00000582252 BAZ2BQ9UIF8 2168 aaKnown RBP25.84■■□□□ 1.73
CCDC47-204ENST00000582252 NPM3O75607 178 aaKnown RBP25.84■■□□□ 1.73
CCDC47-204ENST00000582252 LONRF3Q496Y0 759 aa25.84■■□□□ 1.73
CCDC47-204ENST00000582252 CSRNP2Q9H175 543 aa25.84■■□□□ 1.73
CCDC47-204ENST00000582252 hCG_1984214I3L0E3 225 aa25.83■■□□□ 1.73
CCDC47-204ENST00000582252 ATP2C1P98194 919 aaPredicted RBP25.83■■□□□ 1.73
CCDC47-204ENST00000582252 ASPRV1Q53RT3 343 aa25.83■■□□□ 1.73
CCDC47-204ENST00000582252 HEATR3Q7Z4Q2 680 aa25.83■■□□□ 1.73
CCDC47-204ENST00000582252 AOPEPQ8N6M6 819 aa25.83■■□□□ 1.73
CCDC47-204ENST00000582252 ZNF713Q8N859 430 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms