RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 STK11IPQ8N1F8 1099 aa17.25■□□□□ 0.35
CCDC57-214ENST00000582040 APPBP2Q92624 585 aa17.25■□□□□ 0.35
CCDC57-214ENST00000582040 GPATCH3Q96I76 525 aa17.25■□□□□ 0.35
CCDC57-214ENST00000582040 STRBPQ96SI9 672 aaKnown RBP17.25■□□□□ 0.35
CCDC57-214ENST00000582040 GOPCQ9HD26 462 aa17.25■□□□□ 0.35
CCDC57-214ENST00000582040 SLC5A4Q9NY91 659 aa17.25■□□□□ 0.35
CCDC57-214ENST00000582040 GSG1L2A8MUP6 293 aa17.24■□□□□ 0.35
CCDC57-214ENST00000582040 FCER1AP12319 257 aa17.24■□□□□ 0.35
CCDC57-214ENST00000582040 RASA1P20936 1047 aa17.24■□□□□ 0.35
CCDC57-214ENST00000582040 MDM2Q00987 491 aaPredicted RBP17.24■□□□□ 0.35
CCDC57-214ENST00000582040 GJC2Q5T442 439 aaPredicted RBP17.24■□□□□ 0.35
CCDC57-214ENST00000582040 OSBP2Q969R2 916 aa17.24■□□□□ 0.35
CCDC57-214ENST00000582040 MAML3Q96JK9 1138 aa17.24■□□□□ 0.35
CCDC57-214ENST00000582040 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCDC57-214ENST00000582040 DCTPP1Q9H773 170 aa17.24■□□□□ 0.35
CCDC57-214ENST00000582040 PPP1R9AQ9ULJ8 1098 aa17.24■□□□□ 0.35
CCDC57-214ENST00000582040 SEPT4O43236 478 aa17.23■□□□□ 0.35
CCDC57-214ENST00000582040 SLC25A27O95847 323 aa17.23■□□□□ 0.35
CCDC57-214ENST00000582040 LRIT3Q3SXY7 679 aa17.23■□□□□ 0.35
CCDC57-214ENST00000582040 SBK1Q52WX2 424 aa17.23■□□□□ 0.35
CCDC57-214ENST00000582040 PRAMEF19Q5SWL8 479 aa17.23■□□□□ 0.35
CCDC57-214ENST00000582040 RIOX2Q8IUF8 465 aa17.23■□□□□ 0.35
CCDC57-214ENST00000582040 EPB41L4AQ9HCS5 686 aaPredicted RBP17.23■□□□□ 0.35
CCDC57-214ENST00000582040 ADAMTS5Q9UNA0 930 aa17.23■□□□□ 0.35
CCDC57-214ENST00000582040 LTBP2Q14767 1821 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 MINDY4BA8MYZ0 360 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 KBTBD13C9JR72 458 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 VWA5AO00534 786 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 RNF113AO15541 343 aaKnown RBP17.22■□□□□ 0.35
CCDC57-214ENST00000582040 GPAA1O43292 621 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
CCDC57-214ENST00000582040 RTP1P59025 263 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 GIMAP6Q6P9H5 292 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 ARRDC4Q8NCT1 418 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 MMP19Q99542 508 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 NUP88Q99567 741 aaPredicted RBP17.22■□□□□ 0.35
CCDC57-214ENST00000582040 MKNK2Q9HBH9 465 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 ZNF214Q9UL59 606 aaPredicted RBP17.22■□□□□ 0.35
CCDC57-214ENST00000582040 PLXNA1Q9UIW2 1896 aa17.22■□□□□ 0.35
CCDC57-214ENST00000582040 M0R2C6 588 aa17.21■□□□□ 0.35
CCDC57-214ENST00000582040 PGK2P07205 417 aa17.21■□□□□ 0.35
CCDC57-214ENST00000582040 ZFYP08048 801 aaPredicted RBP17.21■□□□□ 0.35
CCDC57-214ENST00000582040 TDO2P48775 406 aa17.21■□□□□ 0.35
CCDC57-214ENST00000582040 KCTD2Q14681 263 aa17.21■□□□□ 0.35
CCDC57-214ENST00000582040 FAM47AQ5JRC9 791 aa17.21■□□□□ 0.35
CCDC57-214ENST00000582040 REPS2Q8NFH8 660 aa17.21■□□□□ 0.35
CCDC57-214ENST00000582040 ATP11BQ9Y2G3 1177 aa17.21■□□□□ 0.35
CCDC57-214ENST00000582040 ZNFX1Q9P2E3 1918 aaKnown RBP17.21■□□□□ 0.35
CCDC57-214ENST00000582040 MYH4Q9Y623 1939 aa17.2■□□□□ 0.34
CCDC57-214ENST00000582040 COPB2P35606 906 aa17.2■□□□□ 0.34
CCDC57-214ENST00000582040 STAT3P40763 770 aa17.2■□□□□ 0.34
CCDC57-214ENST00000582040 GPR153Q6NV75 609 aa17.2■□□□□ 0.34
CCDC57-214ENST00000582040 Q7L0L9 218 aa17.2■□□□□ 0.34
CCDC57-214ENST00000582040 SLF1Q9BQI6 1058 aa17.2■□□□□ 0.34
CCDC57-214ENST00000582040 NYAP2Q9P242 653 aa17.2■□□□□ 0.34
CCDC57-214ENST00000582040 DNAH12Q6ZR08 3092 aa17.2■□□□□ 0.34
CCDC57-214ENST00000582040 NDUFB10O96000 172 aa17.19■□□□□ 0.34
CCDC57-214ENST00000582040 GNAT2P19087 354 aa17.19■□□□□ 0.34
CCDC57-214ENST00000582040 LRRC41Q15345 812 aa17.19■□□□□ 0.34
CCDC57-214ENST00000582040 DEFB123Q8N688 67 aa17.19■□□□□ 0.34
CCDC57-214ENST00000582040 LBHD1Q9BQE6 289 aaPredicted RBP17.19■□□□□ 0.34
CCDC57-214ENST00000582040 PRKAG2Q9UGJ0 569 aa17.19■□□□□ 0.34
CCDC57-214ENST00000582040 IGKV6D-41A0A0C4DH26 115 aa17.18■□□□□ 0.34
CCDC57-214ENST00000582040 F5H6K3 240 aa17.18■□□□□ 0.34
CCDC57-214ENST00000582040 PRDM1O75626 825 aa17.18■□□□□ 0.34
CCDC57-214ENST00000582040 APPP05067 770 aa17.18■□□□□ 0.34
CCDC57-214ENST00000582040 KLRC3Q07444 240 aa17.18■□□□□ 0.34
CCDC57-214ENST00000582040 ZNF792Q3KQV3 632 aa17.18■□□□□ 0.34
CCDC57-214ENST00000582040 SNRNP48Q6IEG0 339 aaKnown RBP17.18■□□□□ 0.34
CCDC57-214ENST00000582040 TINF2Q9BSI4 451 aa17.18■□□□□ 0.34
CCDC57-214ENST00000582040 TEX13BQ9BXU2 312 aa17.18■□□□□ 0.34
CCDC57-214ENST00000582040 TTC41PQ6P2S7 1318 aa17.18■□□□□ 0.34
CCDC57-214ENST00000582040 TAL1P17542 331 aaPredicted RBP17.17■□□□□ 0.34
CCDC57-214ENST00000582040 ADCYAP1R1P41586 468 aa17.17■□□□□ 0.34
CCDC57-214ENST00000582040 LRRFIP1Q32MZ4 808 aaKnown RBP17.17■□□□□ 0.34
CCDC57-214ENST00000582040 TRIM60Q495X7 471 aa17.17■□□□□ 0.34
CCDC57-214ENST00000582040 SLC39A5Q6ZMH5 540 aa17.17■□□□□ 0.34
CCDC57-214ENST00000582040 OTUD7AQ8TE49 926 aaPredicted RBP17.17■□□□□ 0.34
CCDC57-214ENST00000582040 FERMT2Q96AC1 680 aa17.17■□□□□ 0.34
CCDC57-214ENST00000582040 SEC62Q99442 399 aaKnown RBP17.17■□□□□ 0.34
CCDC57-214ENST00000582040 ZNF287Q9HBT7 754 aa17.17■□□□□ 0.34
CCDC57-214ENST00000582040 XPNPEP3Q9NQH7 507 aa17.17■□□□□ 0.34
CCDC57-214ENST00000582040 PRDM5Q9NQX1 630 aaPredicted RBP17.17■□□□□ 0.34
CCDC57-214ENST00000582040 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
CCDC57-214ENST00000582040 NRBP1Q9UHY1 535 aa17.17■□□□□ 0.34
CCDC57-214ENST00000582040 DIS3Q9Y2L1 958 aaKnown RBP17.17■□□□□ 0.34
CCDC57-214ENST00000582040 PCDHB15Q9Y5E8 787 aa17.17■□□□□ 0.34
CCDC57-214ENST00000582040 ERC2O15083 957 aa17.16■□□□□ 0.34
CCDC57-214ENST00000582040 RARBP10826 455 aa17.16■□□□□ 0.34
CCDC57-214ENST00000582040 SNX17Q15036 470 aa17.16■□□□□ 0.34
CCDC57-214ENST00000582040 IFNL3Q8IZI9 196 aa17.16■□□□□ 0.34
CCDC57-214ENST00000582040 ZNF444Q8N0Y2 327 aaPredicted RBP17.16■□□□□ 0.34
CCDC57-214ENST00000582040 LRRC47Q8N1G4 583 aaKnown RBP17.16■□□□□ 0.34
CCDC57-214ENST00000582040 PI4K2BQ8TCG2 481 aa17.16■□□□□ 0.34
CCDC57-214ENST00000582040 LENG1Q96BZ8 264 aaPredicted RBP17.16■□□□□ 0.34
CCDC57-214ENST00000582040 CEP95Q96GE4 821 aa17.16■□□□□ 0.34
CCDC57-214ENST00000582040 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
CCDC57-214ENST00000582040 PLIN4Q96Q06 1357 aa17.15■□□□□ 0.34
CCDC57-214ENST00000582040 PGK1P00558 417 aa17.15■□□□□ 0.34
CCDC57-214ENST00000582040 SLC4A3P48751 1232 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms