RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 PDE4BQ07343 736 aa26.64■■□□□ 1.86
CASC3-207ENST00000581849 OLFML2BQ68BL8 750 aa26.64■■□□□ 1.86
CASC3-207ENST00000581849 DIS3LQ8TF46 1054 aaKnown RBP26.64■■□□□ 1.86
CASC3-207ENST00000581849 NAPBQ9H115 298 aa26.64■■□□□ 1.86
CASC3-207ENST00000581849 SLC5A4Q9NY91 659 aa26.64■■□□□ 1.86
CASC3-207ENST00000581849 FLRT1Q9NZU1 646 aa26.64■■□□□ 1.86
CASC3-207ENST00000581849 COLQQ9Y215 455 aaPredicted RBP26.64■■□□□ 1.86
CASC3-207ENST00000581849 EVI5O60447 810 aa26.63■■□□□ 1.85
CASC3-207ENST00000581849 MSCO60682 206 aa26.63■■□□□ 1.85
CASC3-207ENST00000581849 ADORA2AP29274 412 aa26.63■■□□□ 1.85
CASC3-207ENST00000581849 CCND3P30281 292 aaPredicted RBP26.63■■□□□ 1.85
CASC3-207ENST00000581849 COPB2P35606 906 aa26.63■■□□□ 1.85
CASC3-207ENST00000581849 DPP9Q86TI2 863 aa26.63■■□□□ 1.85
CASC3-207ENST00000581849 NPLOC4Q8TAT6 608 aa26.63■■□□□ 1.85
CASC3-207ENST00000581849 MKL1Q969V6 931 aa26.63■■□□□ 1.85
CASC3-207ENST00000581849 COL11A1P12107 1806 aaPredicted RBP26.62■■□□□ 1.85
CASC3-207ENST00000581849 PLS1Q14651 629 aa26.62■■□□□ 1.85
CASC3-207ENST00000581849 TMEM132BQ14DG7 1078 aa26.62■■□□□ 1.85
CASC3-207ENST00000581849 LHX8Q68G74 356 aa26.62■■□□□ 1.85
CASC3-207ENST00000581849 SMC5Q8IY18 1101 aa26.62■■□□□ 1.85
CASC3-207ENST00000581849 C11orf49Q9H6J7 331 aa26.62■■□□□ 1.85
CASC3-207ENST00000581849 MYH4Q9Y623 1939 aa26.62■■□□□ 1.85
CASC3-207ENST00000581849 ALPK3Q96L96 1907 aa26.61■■□□□ 1.85
CASC3-207ENST00000581849 FRMPD3Q5JV73 1810 aa26.61■■□□□ 1.85
CASC3-207ENST00000581849 F5H6K3 240 aa26.61■■□□□ 1.85
CASC3-207ENST00000581849 VWA5AO00534 786 aa26.61■■□□□ 1.85
CASC3-207ENST00000581849 KLRC3Q07444 240 aa26.61■■□□□ 1.85
CASC3-207ENST00000581849 PPARAQ07869 468 aa26.61■■□□□ 1.85
CASC3-207ENST00000581849 FAM83BQ5T0W9 1011 aa26.61■■□□□ 1.85
CASC3-207ENST00000581849 NCAPG2Q86XI2 1143 aa26.61■■□□□ 1.85
CASC3-207ENST00000581849 RIOX2Q8IUF8 465 aa26.61■■□□□ 1.85
CASC3-207ENST00000581849 RWDD1Q9H446 243 aaPredicted RBP26.61■■□□□ 1.85
CASC3-207ENST00000581849 FBXO28Q9NVF7 368 aa26.61■■□□□ 1.85
CASC3-207ENST00000581849 PPP4R3BQ5MIZ7 849 aa26.6■■□□□ 1.85
CASC3-207ENST00000581849 STK11IPQ8N1F8 1099 aa26.6■■□□□ 1.85
CASC3-207ENST00000581849 NEDD1Q8NHV4 660 aa26.6■■□□□ 1.85
CASC3-207ENST00000581849 HELLSQ9NRZ9 838 aa26.6■■□□□ 1.85
CASC3-207ENST00000581849 MTMR4Q9NYA4 1195 aa26.6■■□□□ 1.85
CASC3-207ENST00000581849 TTLL1O95922 423 aa26.59■■□□□ 1.85
CASC3-207ENST00000581849 NDUFB10O96000 172 aa26.59■■□□□ 1.85
CASC3-207ENST00000581849 FCER1AP12319 257 aa26.59■■□□□ 1.85
CASC3-207ENST00000581849 REPS2Q8NFH8 660 aa26.59■■□□□ 1.85
CASC3-207ENST00000581849 CEP95Q96GE4 821 aa26.59■■□□□ 1.85
CASC3-207ENST00000581849 SLF1Q9BQI6 1058 aa26.59■■□□□ 1.85
CASC3-207ENST00000581849 CLIP2Q9UDT6 1046 aa26.59■■□□□ 1.85
CASC3-207ENST00000581849 DDX20Q9UHI6 824 aaKnown RBP26.59■■□□□ 1.85
CASC3-207ENST00000581849 ZNF214Q9UL59 606 aaPredicted RBP26.59■■□□□ 1.85
CASC3-207ENST00000581849 FOXP2O15409 715 aa26.58■■□□□ 1.85
CASC3-207ENST00000581849 RAD21O60216 631 aa26.58■■□□□ 1.85
CASC3-207ENST00000581849 PRDM1O75626 825 aa26.58■■□□□ 1.85
CASC3-207ENST00000581849 COL6A1P12109 1028 aa26.58■■□□□ 1.85
CASC3-207ENST00000581849 STAT3P40763 770 aa26.58■■□□□ 1.85
CASC3-207ENST00000581849 CHRDL2Q6WN34 429 aa26.58■■□□□ 1.85
CASC3-207ENST00000581849 GMCL1P1Q8NEA9 526 aa26.58■■□□□ 1.85
CASC3-207ENST00000581849 COBLO75128 1261 aa26.57■■□□□ 1.84
CASC3-207ENST00000581849 TSPY3P0CV98 308 aa26.57■■□□□ 1.84
CASC3-207ENST00000581849 TSPY8P0CW00 308 aa26.57■■□□□ 1.84
CASC3-207ENST00000581849 CYBAP13498 195 aa26.57■■□□□ 1.84
CASC3-207ENST00000581849 CYP2C19P33261 490 aa26.57■■□□□ 1.84
CASC3-207ENST00000581849 PRPF38AQ8NAV1 312 aaKnown RBP26.57■■□□□ 1.84
CASC3-207ENST00000581849 PRO3102Q9H379 93 aa26.57■■□□□ 1.84
CASC3-207ENST00000581849 ZNFX1Q9P2E3 1918 aaKnown RBP26.57■■□□□ 1.84
CASC3-207ENST00000581849 TRIOBPQ9H2D6 2365 aa26.56■■□□□ 1.84
CASC3-207ENST00000581849 ALX1Q15699 326 aa26.56■■□□□ 1.84
CASC3-207ENST00000581849 SAMD1Q6SPF0 538 aaPredicted RBP26.56■■□□□ 1.84
CASC3-207ENST00000581849 TEX13BQ9BXU2 312 aa26.56■■□□□ 1.84
CASC3-207ENST00000581849 PCDH10Q9P2E7 1040 aa26.56■■□□□ 1.84
CASC3-207ENST00000581849 ANAPC4Q9UJX5 808 aa26.56■■□□□ 1.84
CASC3-207ENST00000581849 DIS3Q9Y2L1 958 aaKnown RBP26.56■■□□□ 1.84
CASC3-207ENST00000581849 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.56■■□□□ 1.84
CASC3-207ENST00000581849 ATP2A1O14983 1001 aa26.55■■□□□ 1.84
CASC3-207ENST00000581849 FXR1P51114 621 aaKnown RBP eCLIP26.55■■□□□ 1.84
CASC3-207ENST00000581849 CCDC129Q6ZRS4 1044 aa26.55■■□□□ 1.84
CASC3-207ENST00000581849 MMP19Q99542 508 aa26.55■■□□□ 1.84
CASC3-207ENST00000581849 NUP88Q99567 741 aaPredicted RBP26.55■■□□□ 1.84
CASC3-207ENST00000581849 LNPKQ9C0E8 428 aa26.55■■□□□ 1.84
CASC3-207ENST00000581849 NRBP1Q9UHY1 535 aa26.55■■□□□ 1.84
CASC3-207ENST00000581849 PFASO15067 1338 aa26.55■■□□□ 1.84
CASC3-207ENST00000581849 TFAP4Q01664 338 aa26.54■■□□□ 1.84
CASC3-207ENST00000581849 KCTD2Q14681 263 aa26.54■■□□□ 1.84
CASC3-207ENST00000581849 MAML3Q96JK9 1138 aa26.54■■□□□ 1.84
CASC3-207ENST00000581849 FEM1BQ9UK73 627 aa26.54■■□□□ 1.84
CASC3-207ENST00000581849 A0A1W2PPC1 479 aa26.53■■□□□ 1.84
CASC3-207ENST00000581849 MCMDC2Q4G0Z9 681 aa26.53■■□□□ 1.84
CASC3-207ENST00000581849 TRPV1Q8NER1 839 aa26.53■■□□□ 1.84
CASC3-207ENST00000581849 OSBPL3Q9H4L5 887 aa26.53■■□□□ 1.84
CASC3-207ENST00000581849 ZMYM6O95789 1325 aa26.53■■□□□ 1.84
CASC3-207ENST00000581849 SEPT4O43236 478 aa26.52■■□□□ 1.84
CASC3-207ENST00000581849 FDX1P10109 184 aa26.52■■□□□ 1.84
CASC3-207ENST00000581849 CNGA1P29973 690 aa26.52■■□□□ 1.84
CASC3-207ENST00000581849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.52■■□□□ 1.84
CASC3-207ENST00000581849 CHD1LQ86WJ1 897 aa26.52■■□□□ 1.84
CASC3-207ENST00000581849 RBM27Q9P2N5 1060 aaKnown RBP26.52■■□□□ 1.84
CASC3-207ENST00000581849 ORC4O43929 436 aa26.51■■□□□ 1.83
CASC3-207ENST00000581849 ZBED4O75132 1171 aa26.51■■□□□ 1.83
CASC3-207ENST00000581849 FGRP09769 529 aa26.51■■□□□ 1.83
CASC3-207ENST00000581849 OAZ1P54368 228 aa26.51■■□□□ 1.83
CASC3-207ENST00000581849 NUCB1Q02818 461 aa26.51■■□□□ 1.83
CASC3-207ENST00000581849 FAM47AQ5JRC9 791 aa26.51■■□□□ 1.83
CASC3-207ENST00000581849 VPS53Q5VIR6 699 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms