RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 DDRGK1Q96HY6 314 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 LRRCC1Q9C099 1032 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 KANSL2Q9H9L4 492 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 RCAN3Q9UKA8 241 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 RLFQ13129 1914 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 WDR46O15213 610 aaKnown RBP12.75□□□□□ -0.37
RFFL-209ENST00000581265 SEPT4O43236 478 aa12.75□□□□□ -0.37
RFFL-209ENST00000581265 CHGBP05060 677 aa12.75□□□□□ -0.37
RFFL-209ENST00000581265 EEF2P13639 858 aaKnown RBP12.75□□□□□ -0.37
RFFL-209ENST00000581265 PLS1Q14651 629 aa12.75□□□□□ -0.37
RFFL-209ENST00000581265 CTR9Q6PD62 1173 aa12.75□□□□□ -0.37
RFFL-209ENST00000581265 CLEC10AQ8IUN9 316 aa12.75□□□□□ -0.37
RFFL-209ENST00000581265 NAV1Q8NEY1 1877 aa12.75□□□□□ -0.37
RFFL-209ENST00000581265 PUS7LQ9H0K6 701 aaKnown RBP12.75□□□□□ -0.37
RFFL-209ENST00000581265 SLC4A4Q9Y6R1 1079 aa12.75□□□□□ -0.37
RFFL-209ENST00000581265 SLC25A27O95847 323 aa12.74□□□□□ -0.37
RFFL-209ENST00000581265 FCER1AP12319 257 aa12.74□□□□□ -0.37
RFFL-209ENST00000581265 TMEM132BQ14DG7 1078 aa12.74□□□□□ -0.37
RFFL-209ENST00000581265 NCAPG2Q86XI2 1143 aa12.74□□□□□ -0.37
RFFL-209ENST00000581265 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
RFFL-209ENST00000581265 SBK1Q52WX2 424 aa12.73□□□□□ -0.37
RFFL-209ENST00000581265 GJC2Q5T442 439 aaPredicted RBP12.73□□□□□ -0.37
RFFL-209ENST00000581265 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
RFFL-209ENST00000581265 RIOX2Q8IUF8 465 aa12.73□□□□□ -0.37
RFFL-209ENST00000581265 MAML3Q96JK9 1138 aa12.73□□□□□ -0.37
RFFL-209ENST00000581265 STRBPQ96SI9 672 aaKnown RBP12.73□□□□□ -0.37
RFFL-209ENST00000581265 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.37
RFFL-209ENST00000581265 ECHDC1Q9NTX5 307 aa12.73□□□□□ -0.37
RFFL-209ENST00000581265 NRBP1Q9UHY1 535 aa12.73□□□□□ -0.37
RFFL-209ENST00000581265 ZNF236Q9UL36 1845 aa12.72□□□□□ -0.37
RFFL-209ENST00000581265 VWA5AO00534 786 aa12.72□□□□□ -0.37
RFFL-209ENST00000581265 SMARCA5O60264 1052 aaPredicted RBP12.72□□□□□ -0.37
RFFL-209ENST00000581265 STAT3P40763 770 aa12.72□□□□□ -0.37
RFFL-209ENST00000581265 PRAMEF19Q5SWL8 479 aa12.72□□□□□ -0.37
RFFL-209ENST00000581265 C20orf194Q5TEA3 1177 aa12.72□□□□□ -0.37
RFFL-209ENST00000581265 SLC39A5Q6ZMH5 540 aa12.72□□□□□ -0.37
RFFL-209ENST00000581265 GOPCQ9HD26 462 aa12.72□□□□□ -0.37
RFFL-209ENST00000581265 FBXO28Q9NVF7 368 aa12.72□□□□□ -0.37
RFFL-209ENST00000581265 ARPP21Q9UBL0 812 aaPredicted RBP12.72□□□□□ -0.37
RFFL-209ENST00000581265 DIS3Q9Y2L1 958 aaKnown RBP12.72□□□□□ -0.37
RFFL-209ENST00000581265 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
RFFL-209ENST00000581265 A0A0G2JMZ2 1700 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 GSG1L2A8MUP6 293 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 RTP1P59025 263 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 SNX17Q15036 470 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 SHHQ15465 462 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 C1orf53Q5VUE5 145 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 ANO1Q5XXA6 986 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 KBTBD3Q8NAB2 608 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 IL27Q8NEV9 243 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 REPS2Q8NFH8 660 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 DCTPP1Q9H773 170 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 ZNF214Q9UL59 606 aaPredicted RBP12.71□□□□□ -0.37
RFFL-209ENST00000581265 PPP1R9AQ9ULJ8 1098 aa12.71□□□□□ -0.37
RFFL-209ENST00000581265 FRMPD3Q5JV73 1810 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 RASA1P20936 1047 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 COPB2P35606 906 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 SMAD3P84022 425 aaKnown RBP12.7□□□□□ -0.38
RFFL-209ENST00000581265 KCTD2Q14681 263 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 LRRC41Q15345 812 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 ZNF792Q3KQV3 632 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 FAM83BQ5T0W9 1011 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
RFFL-209ENST00000581265 OSBP2Q969R2 916 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 MMP19Q99542 508 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 TINF2Q9BSI4 451 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 NYAP2Q9P242 653 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 UNC80Q8N2C7 3258 aa12.7□□□□□ -0.38
RFFL-209ENST00000581265 MYH8P13535 1937 aa12.69□□□□□ -0.38
RFFL-209ENST00000581265 F5H6K3 240 aa12.69□□□□□ -0.38
RFFL-209ENST00000581265 RNF113AO15541 343 aaKnown RBP12.69□□□□□ -0.38
RFFL-209ENST00000581265 PGK2P07205 417 aa12.69□□□□□ -0.38
RFFL-209ENST00000581265 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
RFFL-209ENST00000581265 ADCYAP1R1P41586 468 aa12.69□□□□□ -0.38
RFFL-209ENST00000581265 KLRC3Q07444 240 aa12.69□□□□□ -0.38
RFFL-209ENST00000581265 APPBP2Q92624 585 aa12.69□□□□□ -0.38
RFFL-209ENST00000581265 MKNK2Q9HBH9 465 aa12.69□□□□□ -0.38
RFFL-209ENST00000581265 PRDM5Q9NQX1 630 aaPredicted RBP12.69□□□□□ -0.38
RFFL-209ENST00000581265 ATP11BQ9Y2G3 1177 aa12.69□□□□□ -0.38
RFFL-209ENST00000581265 SMCHD1A6NHR9 2005 aa12.69□□□□□ -0.38
RFFL-209ENST00000581265 ZNFX1Q9P2E3 1918 aaKnown RBP12.68□□□□□ -0.38
RFFL-209ENST00000581265 MINDY4BA8MYZ0 360 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 ATP2A1O14983 1001 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 RARBP10826 455 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 GNAT2P19087 354 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 FAM47AQ5JRC9 791 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
RFFL-209ENST00000581265 PRPF38AQ8NAV1 312 aaKnown RBP12.68□□□□□ -0.38
RFFL-209ENST00000581265 PPM1EQ8WY54 764 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 MKL1Q969V6 931 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 GPATCH3Q96I76 525 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 SLF1Q9BQI6 1058 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 TEX13BQ9BXU2 312 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 TTYH1Q9H313 450 aaPredicted RBP12.68□□□□□ -0.38
RFFL-209ENST00000581265 PHF24Q9UPV7 400 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 ROBO3Q96MS0 1386 aa12.68□□□□□ -0.38
RFFL-209ENST00000581265 PARP14Q460N5 1801 aa12.67□□□□□ -0.38
RFFL-209ENST00000581265 DNAH12Q6ZR08 3092 aa12.67□□□□□ -0.38
RFFL-209ENST00000581265 IGKV6D-41A0A0C4DH26 115 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms