RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 KRT40Q6A162 431 aa12.77□□□□□ -0.37
SKA2-206ENST00000581068 MCTP1Q6DN14 999 aa12.77□□□□□ -0.37
SKA2-206ENST00000581068 OTUD7BQ6GQQ9 843 aa12.77□□□□□ -0.37
SKA2-206ENST00000581068 FERMT3Q86UX7 667 aa12.77□□□□□ -0.37
SKA2-206ENST00000581068 GMCL1Q96IK5 515 aa12.77□□□□□ -0.37
SKA2-206ENST00000581068 GOPCQ9HD26 462 aa12.77□□□□□ -0.37
SKA2-206ENST00000581068 FRMPD2Q68DX3 1309 aaPredicted RBP12.77□□□□□ -0.37
SKA2-206ENST00000581068 A0A1W2PRG0 241 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 UBE2Q2LH0YL09 131 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 GOLGA6L22H0YM25 854 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 RAD21O60216 631 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 SCG2P13521 617 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 INPP5BP32019 993 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 NF2P35240 595 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 SLC1A4P43007 532 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 SAFBQ15424 915 aaKnown RBP eCLIP12.76□□□□□ -0.37
SKA2-206ENST00000581068 PFKFB3Q16875 520 aaPredicted RBP12.76□□□□□ -0.37
SKA2-206ENST00000581068 RASGRP2Q7LDG7 609 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 SCYL3Q8IZE3 742 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 ACER1Q8TDN7 264 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 KLRG1Q96E93 195 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
SKA2-206ENST00000581068 WRNIP1Q96S55 665 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 UBA5Q9GZZ9 404 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 RIOX1Q9H6W3 641 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 MYH4Q9Y623 1939 aa12.76□□□□□ -0.37
SKA2-206ENST00000581068 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 CYTH3O43739 400 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
SKA2-206ENST00000581068 USP2O75604 605 aaPredicted RBP12.75□□□□□ -0.37
SKA2-206ENST00000581068 NDUFB10O96000 172 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 BMP3P12645 472 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 VEGFAP15692 232 aaPredicted RBP12.75□□□□□ -0.37
SKA2-206ENST00000581068 PTMSP20962 102 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 ECE1P42892 770 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 SLC35G1Q2M3R5 365 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 NOL9Q5SY16 702 aaKnown RBP12.75□□□□□ -0.37
SKA2-206ENST00000581068 KCTD1Q719H9 257 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 PIBF1Q8WXW3 757 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 CDCA5Q96FF9 252 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 VCPKMTQ9H867 229 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 RRAGCQ9HB90 399 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 AS3MTQ9HBK9 375 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 VAT1LQ9HCJ6 419 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 PICK1Q9NRD5 415 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 GJB4Q9NTQ9 266 aa12.75□□□□□ -0.37
SKA2-206ENST00000581068 ISY1Q9ULR0 285 aaKnown RBP12.75□□□□□ -0.37
SKA2-206ENST00000581068 SSC5DA1L4H1 1573 aa12.74□□□□□ -0.37
SKA2-206ENST00000581068 DDX11L8A8MPP1 907 aa12.74□□□□□ -0.37
SKA2-206ENST00000581068 MMP1P03956 469 aa12.74□□□□□ -0.37
SKA2-206ENST00000581068 MAP3K9P80192 1104 aa12.74□□□□□ -0.37
SKA2-206ENST00000581068 KIF23Q02241 960 aaPredicted RBP12.74□□□□□ -0.37
SKA2-206ENST00000581068 GNL2Q13823 731 aaKnown RBP12.74□□□□□ -0.37
SKA2-206ENST00000581068 TTBK2Q6IQ55 1244 aa12.74□□□□□ -0.37
SKA2-206ENST00000581068 BRAPQ7Z569 592 aa12.74□□□□□ -0.37
SKA2-206ENST00000581068 FAM177A1Q8N128 213 aaPredicted RBP12.74□□□□□ -0.37
SKA2-206ENST00000581068 FEZ1Q99689 392 aa12.74□□□□□ -0.37
SKA2-206ENST00000581068 WDR18Q9BV38 432 aa12.74□□□□□ -0.37
SKA2-206ENST00000581068 CPVLQ9H3G5 476 aa12.74□□□□□ -0.37
SKA2-206ENST00000581068 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.74□□□□□ -0.37
SKA2-206ENST00000581068 SEC63Q9UGP8 760 aaKnown RBP12.74□□□□□ -0.37
SKA2-206ENST00000581068 POLR2AP24928 1970 aaKnown RBP12.74□□□□□ -0.37
SKA2-206ENST00000581068 UTRNP46939 3433 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 hCG_1984214I3L0E3 225 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 PTPRAP18433 802 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
SKA2-206ENST00000581068 PRKG1Q13976 671 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 FOXD4L6Q3SYB3 417 aaPredicted RBP12.73□□□□□ -0.37
SKA2-206ENST00000581068 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 BTNL9Q6UXG8 535 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 DLK2Q6UY11 383 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 FOXD4L3Q6VB84 417 aaPredicted RBP12.73□□□□□ -0.37
SKA2-206ENST00000581068 CCDC84Q86UT8 332 aaPredicted RBP12.73□□□□□ -0.37
SKA2-206ENST00000581068 ADGRF4Q8IZF3 695 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 ZNF713Q8N859 430 aaPredicted RBP12.73□□□□□ -0.37
SKA2-206ENST00000581068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.73□□□□□ -0.37
SKA2-206ENST00000581068 ZKSCAN4Q969J2 545 aaPredicted RBP12.73□□□□□ -0.37
SKA2-206ENST00000581068 ZNF396Q96N95 335 aaPredicted RBP12.73□□□□□ -0.37
SKA2-206ENST00000581068 PIGSQ96S52 555 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 PHF20Q9BVI0 1012 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 GLIS2Q9BZE0 524 aaPredicted RBP12.73□□□□□ -0.37
SKA2-206ENST00000581068 KIAA1683Q9H0B3 1180 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 JMJD4Q9H9V9 463 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 BRMS1Q9HCU9 246 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 VPS54Q9P1Q0 977 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 KCNJ14Q9UNX9 436 aa12.73□□□□□ -0.37
SKA2-206ENST00000581068 PNMA6FA0A0J9YX94 578 aa12.72□□□□□ -0.37
SKA2-206ENST00000581068 USP17L10C9JJH3 530 aa12.72□□□□□ -0.37
SKA2-206ENST00000581068 TMEM232C9JQI7 657 aa12.72□□□□□ -0.37
SKA2-206ENST00000581068 NCLP19338 710 aaKnown RBP12.72□□□□□ -0.37
SKA2-206ENST00000581068 U2AF2P26368 475 aaKnown RBP eCLIP12.72□□□□□ -0.37
SKA2-206ENST00000581068 CALML3P27482 149 aa12.72□□□□□ -0.37
SKA2-206ENST00000581068 SLC16A2P36021 539 aa12.72□□□□□ -0.37
SKA2-206ENST00000581068 USP14P54578 494 aa12.72□□□□□ -0.37
SKA2-206ENST00000581068 NLRP5P59047 1200 aa12.72□□□□□ -0.37
SKA2-206ENST00000581068 KRT85P78386 507 aa12.72□□□□□ -0.37
SKA2-206ENST00000581068 DNM1Q05193 864 aaKnown RBP12.72□□□□□ -0.37
SKA2-206ENST00000581068 ZYXQ15942 572 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms