RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 MCMDC2Q4G0Z9 681 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 VPS53Q5VIR6 699 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 PRPF40BQ6NWY9 871 aaKnown RBP7.47□□□□□ -1.21
PTPRM-213ENST00000580949 FBXO33Q7Z6M2 555 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 TXNRD3Q86VQ6 643 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 SPATA5Q8NB90 893 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 RETREG2Q8NC44 543 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 OSBP2Q969R2 916 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 TRAIPQ9BWF2 469 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 PDGFDQ9GZP0 370 aaPredicted RBP7.47□□□□□ -1.21
PTPRM-213ENST00000580949 NEUROD4Q9HD90 331 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 HELLSQ9NRZ9 838 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 ATXN7L1Q9ULK2 861 aaPredicted RBP7.47□□□□□ -1.21
PTPRM-213ENST00000580949 RBM8AQ9Y5S9 174 aaKnown RBP7.47□□□□□ -1.21
PTPRM-213ENST00000580949 TNRC6CQ9HCJ0 1690 aaKnown RBP7.47□□□□□ -1.21
PTPRM-213ENST00000580949 IRS2Q9Y4H2 1338 aa7.47□□□□□ -1.21
PTPRM-213ENST00000580949 MYH3P11055 1940 aa7.46□□□□□ -1.21
PTPRM-213ENST00000580949 LAMB2P55268 1798 aa7.46□□□□□ -1.21
PTPRM-213ENST00000580949 A0A0G2JLW4 131 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 TCRBV5S4A2TA0A5A2 114 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 SLC27A2O14975 620 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 ATXN7O15265 892 aaPredicted RBP7.46□□□□□ -1.22
PTPRM-213ENST00000580949 FAM157BP0CG42 384 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 MCCP23508 829 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 NEK4P51957 841 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 GPSM2P81274 684 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 KRT76Q01546 638 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 CREB3L3Q68CJ9 461 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 LRRC69Q6ZNQ3 347 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 HSCBQ8IWL3 235 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 SUSD3Q96L08 255 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 BRIP1Q9BX63 1249 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 UPF3BQ9BZI7 483 aaKnown RBP7.46□□□□□ -1.22
PTPRM-213ENST00000580949 ANKRD2Q9GZV1 360 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 WWC3Q9ULE0 1092 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 TNS1Q9HBL0 1735 aaKnown RBP7.46□□□□□ -1.22
PTPRM-213ENST00000580949 ZNF804BA4D1E1 1349 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 MAST3O60307 1309 aa7.46□□□□□ -1.22
PTPRM-213ENST00000580949 TAF1P21675 1872 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 K7ELQ4 463 aaPredicted RBP7.45□□□□□ -1.22
PTPRM-213ENST00000580949 BNIP3LO60238 219 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 BBOX1O75936 387 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 ZFYP08048 801 aaPredicted RBP7.45□□□□□ -1.22
PTPRM-213ENST00000580949 CPA1P15085 419 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 PDE6AP16499 860 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 ADD2P35612 726 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 DDIT3P35638 169 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 ADCK5Q3MIX3 580 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 RNFT1Q5M7Z0 435 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 SLC9C2Q5TAH2 1124 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 RPGRQ92834 1020 aaKnown RBP7.45□□□□□ -1.22
PTPRM-213ENST00000580949 KLRG1Q96E93 195 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 RBM17Q96I25 401 aaKnown RBP7.45□□□□□ -1.22
PTPRM-213ENST00000580949 GPR101Q96P66 508 aaPredicted RBP7.45□□□□□ -1.22
PTPRM-213ENST00000580949 CRAMP1Q96RY5 1269 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 PUS7LQ9H0K6 701 aaKnown RBP7.45□□□□□ -1.22
PTPRM-213ENST00000580949 STK32BQ9NY57 414 aa7.45□□□□□ -1.22
PTPRM-213ENST00000580949 COL1A1P02452 1464 aaPredicted RBP7.44□□□□□ -1.22
PTPRM-213ENST00000580949 CARNS1A5YM72 827 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 IDH1O75874 414 aaKnown RBP7.44□□□□□ -1.22
PTPRM-213ENST00000580949 SRGNP10124 158 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 HSPD1P10809 573 aaKnown RBP7.44□□□□□ -1.22
PTPRM-213ENST00000580949 HIBADHP31937 336 aaKnown RBP7.44□□□□□ -1.22
PTPRM-213ENST00000580949 TNP2Q05952 138 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 TTF1Q15361 905 aaPredicted RBP7.44□□□□□ -1.22
PTPRM-213ENST00000580949 UBE3CQ15386 1083 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 IER5Q5VY09 327 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 TTLL5Q6EMB2 1281 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 APPBP2Q92624 585 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 ABHD17AQ96GS6 310 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 HSH2DQ96JZ2 352 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 TTC14Q96N46 770 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 CNTNAP3BQ96NU0 1288 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 MKNK1Q9BUB5 465 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 CNTNAP3Q9BZ76 1288 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 TM6SF1Q9BZW5 370 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 SLKQ9H2G2 1235 aaPredicted RBP7.44□□□□□ -1.22
PTPRM-213ENST00000580949 ZNF532Q9HCE3 1301 aa7.44□□□□□ -1.22
PTPRM-213ENST00000580949 EFSO43281 561 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 CYP21A2P08686 494 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 MAPTP10636 758 aaKnown RBP7.43□□□□□ -1.22
PTPRM-213ENST00000580949 BAG6P46379 1132 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 KCNJ4P48050 445 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 LAMC2Q13753 1193 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 LRRFIP1Q32MZ4 808 aaKnown RBP7.43□□□□□ -1.22
PTPRM-213ENST00000580949 C11orf91Q3C1V1 193 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 CAVIN4Q5BKX8 364 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 C16orf46Q6P387 395 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 OLFM4Q6UX06 510 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 C15orf52Q6ZUT6 534 aaKnown RBP7.43□□□□□ -1.22
PTPRM-213ENST00000580949 STOX1Q6ZVD7 989 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 KCTD17Q8N5Z5 321 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 ZNF280CQ8ND82 737 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 ZNF384Q8TF68 577 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 TMX3Q96JJ7 454 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 JAKMIP1Q96N16 626 aaKnown RBP7.43□□□□□ -1.22
PTPRM-213ENST00000580949 DSCC1Q9BVC3 393 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.43□□□□□ -1.22
PTPRM-213ENST00000580949 GNL3LQ9NVN8 582 aaKnown RBP7.43□□□□□ -1.22
PTPRM-213ENST00000580949 POLLQ9UGP5 575 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms