RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 NCAPG2Q86XI2 1143 aa23.42■■□□□ 1.34
LIMD2-209ENST00000580222 FAM122AQ96E09 287 aa23.42■■□□□ 1.34
LIMD2-209ENST00000580222 NECAB3Q96P71 396 aaPredicted RBP23.42■■□□□ 1.34
LIMD2-209ENST00000580222 UHRF1Q96T88 793 aaPredicted RBP23.42■■□□□ 1.34
LIMD2-209ENST00000580222 TANGO6Q9C0B7 1094 aa23.42■■□□□ 1.34
LIMD2-209ENST00000580222 FPGT-TNNI3KV9GXZ4 949 aa23.42■■□□□ 1.34
LIMD2-209ENST00000580222 ZNF236Q9UL36 1845 aa23.42■■□□□ 1.34
LIMD2-209ENST00000580222 FOCADQ5VW36 1801 aa23.41■■□□□ 1.34
LIMD2-209ENST00000580222 SURF6O75683 361 aaKnown RBP23.41■■□□□ 1.34
LIMD2-209ENST00000580222 RARBP10826 455 aa23.41■■□□□ 1.34
LIMD2-209ENST00000580222 PLS1Q14651 629 aa23.41■■□□□ 1.34
LIMD2-209ENST00000580222 AKNAD1Q5T1N1 836 aa23.41■■□□□ 1.34
LIMD2-209ENST00000580222 ANKRD33Q7Z3H0 272 aa23.41■■□□□ 1.34
LIMD2-209ENST00000580222 ABRAQ8N0Z2 381 aa23.41■■□□□ 1.34
LIMD2-209ENST00000580222 ATG4CQ96DT6 458 aa23.41■■□□□ 1.34
LIMD2-209ENST00000580222 CABP5Q9NP86 173 aa23.41■■□□□ 1.34
LIMD2-209ENST00000580222 THEGQ9P2T0 379 aa23.41■■□□□ 1.34
LIMD2-209ENST00000580222 PGK2P07205 417 aa23.4■■□□□ 1.34
LIMD2-209ENST00000580222 DSG3P32926 999 aa23.4■■□□□ 1.34
LIMD2-209ENST00000580222 TMEM240Q5SV17 173 aa23.4■■□□□ 1.34
LIMD2-209ENST00000580222 RASIP1Q5U651 963 aa23.4■■□□□ 1.34
LIMD2-209ENST00000580222 SIAH1Q8IUQ4 282 aa23.4■■□□□ 1.34
LIMD2-209ENST00000580222 SLC44A5Q8NCS7 719 aa23.4■■□□□ 1.34
LIMD2-209ENST00000580222 MROH8Q9H579 483 aa23.4■■□□□ 1.34
LIMD2-209ENST00000580222 TLR7Q9NYK1 1049 aaKnown RBP23.4■■□□□ 1.34
LIMD2-209ENST00000580222 NCOR1O75376 2440 aa23.39■■□□□ 1.34
LIMD2-209ENST00000580222 ADAMTS4O75173 837 aa23.39■■□□□ 1.33
LIMD2-209ENST00000580222 TIMP1P01033 207 aa23.39■■□□□ 1.33
LIMD2-209ENST00000580222 ZNF865P0CJ78 1059 aaPredicted RBP23.39■■□□□ 1.33
LIMD2-209ENST00000580222 IRX5P78411 483 aaPredicted RBP23.39■■□□□ 1.33
LIMD2-209ENST00000580222 MRPS5P82675 430 aaKnown RBP23.39■■□□□ 1.33
LIMD2-209ENST00000580222 GABPAQ06546 454 aa23.39■■□□□ 1.33
LIMD2-209ENST00000580222 CCDC158Q5M9N0 1113 aa23.39■■□□□ 1.33
LIMD2-209ENST00000580222 RNF180Q86T96 592 aa23.39■■□□□ 1.33
LIMD2-209ENST00000580222 GAS2L1Q99501 681 aaPredicted RBP23.39■■□□□ 1.33
LIMD2-209ENST00000580222 TBX21Q9UL17 535 aa23.39■■□□□ 1.33
LIMD2-209ENST00000580222 EXOC6BQ9Y2D4 811 aa23.39■■□□□ 1.33
LIMD2-209ENST00000580222 IDH1O75874 414 aaKnown RBP23.38■■□□□ 1.33
LIMD2-209ENST00000580222 TMEM132BQ14DG7 1078 aa23.38■■□□□ 1.33
LIMD2-209ENST00000580222 TTC6Q86TZ1 520 aa23.38■■□□□ 1.33
LIMD2-209ENST00000580222 CLEC10AQ8IUN9 316 aa23.38■■□□□ 1.33
LIMD2-209ENST00000580222 MAGEB6Q8N7X4 407 aa23.38■■□□□ 1.33
LIMD2-209ENST00000580222 ZNF512BQ96KM6 892 aaPredicted RBP23.38■■□□□ 1.33
LIMD2-209ENST00000580222 TOX2Q96NM4 488 aa23.38■■□□□ 1.33
LIMD2-209ENST00000580222 GPR108Q9NPR9 543 aa23.38■■□□□ 1.33
LIMD2-209ENST00000580222 SLC5A4Q9NY91 659 aa23.38■■□□□ 1.33
LIMD2-209ENST00000580222 NOP58Q9Y2X3 529 aaKnown RBP23.38■■□□□ 1.33
LIMD2-209ENST00000580222 FCER1AP12319 257 aa23.37■■□□□ 1.33
LIMD2-209ENST00000580222 HOXD11P31277 338 aaPredicted RBP23.37■■□□□ 1.33
LIMD2-209ENST00000580222 ACLYP53396 1101 aa23.37■■□□□ 1.33
LIMD2-209ENST00000580222 HSP90AB4PQ58FF6 505 aa23.37■■□□□ 1.33
LIMD2-209ENST00000580222 TINF2Q9BSI4 451 aa23.37■■□□□ 1.33
LIMD2-209ENST00000580222 ANTXR1Q9H6X2 564 aa23.37■■□□□ 1.33
LIMD2-209ENST00000580222 DBNLQ9UJU6 430 aaKnown RBP23.37■■□□□ 1.33
LIMD2-209ENST00000580222 ACRP10323 421 aa23.36■■□□□ 1.33
LIMD2-209ENST00000580222 HDAC1Q13547 482 aaPredicted RBP23.36■■□□□ 1.33
LIMD2-209ENST00000580222 ZNF792Q3KQV3 632 aa23.36■■□□□ 1.33
LIMD2-209ENST00000580222 CCSAPQ6IQ19 270 aaPredicted RBP23.36■■□□□ 1.33
LIMD2-209ENST00000580222 MFSD5Q6N075 450 aa23.36■■□□□ 1.33
LIMD2-209ENST00000580222 SAMD1Q6SPF0 538 aaPredicted RBP23.36■■□□□ 1.33
LIMD2-209ENST00000580222 CCDC129Q6ZRS4 1044 aa23.36■■□□□ 1.33
LIMD2-209ENST00000580222 SPICE1Q8N0Z3 855 aa23.36■■□□□ 1.33
LIMD2-209ENST00000580222 NRBP1Q9UHY1 535 aa23.36■■□□□ 1.33
LIMD2-209ENST00000580222 MYO5AQ9Y4I1 1855 aaKnown RBP23.36■■□□□ 1.33
LIMD2-209ENST00000580222 MYADML2A6NDP7 307 aa23.35■■□□□ 1.33
LIMD2-209ENST00000580222 DCDC2CA8MYV0 355 aa23.35■■□□□ 1.33
LIMD2-209ENST00000580222 MPHOSPH10O00566 681 aaKnown RBP23.35■■□□□ 1.33
LIMD2-209ENST00000580222 FLOT1O75955 427 aa23.35■■□□□ 1.33
LIMD2-209ENST00000580222 CSF2RAP15509 400 aa23.35■■□□□ 1.33
LIMD2-209ENST00000580222 ERC1Q8IUD2 1116 aa23.35■■□□□ 1.33
LIMD2-209ENST00000580222 MB21D1Q8N884 522 aa23.35■■□□□ 1.33
LIMD2-209ENST00000580222 RIOK1Q9BRS2 568 aaKnown RBP23.35■■□□□ 1.33
LIMD2-209ENST00000580222 RWDD1Q9H446 243 aaPredicted RBP23.35■■□□□ 1.33
LIMD2-209ENST00000580222 SMCHD1A6NHR9 2005 aa23.35■■□□□ 1.33
LIMD2-209ENST00000580222 A0A0G2JMZ2 1700 aa23.34■■□□□ 1.33
LIMD2-209ENST00000580222 APBB1O00213 710 aa23.34■■□□□ 1.33
LIMD2-209ENST00000580222 IGFBP4P22692 258 aa23.34■■□□□ 1.33
LIMD2-209ENST00000580222 KCNA10Q16322 511 aa23.34■■□□□ 1.33
LIMD2-209ENST00000580222 ZNF365Q70YC5 407 aa23.34■■□□□ 1.33
LIMD2-209ENST00000580222 KLHDC9Q8NEP7 349 aa23.34■■□□□ 1.33
LIMD2-209ENST00000580222 CCDC8Q9H0W5 538 aaPredicted RBP23.34■■□□□ 1.33
LIMD2-209ENST00000580222 STARD7Q9NQZ5 370 aa23.34■■□□□ 1.33
LIMD2-209ENST00000580222 CYP2D6P10635 497 aa23.33■■□□□ 1.33
LIMD2-209ENST00000580222 BMP1P13497 986 aa23.33■■□□□ 1.33
LIMD2-209ENST00000580222 CDK7P50613 346 aa23.33■■□□□ 1.33
LIMD2-209ENST00000580222 MMP19Q99542 508 aa23.33■■□□□ 1.33
LIMD2-209ENST00000580222 TSEN34Q9BSV6 310 aaKnown RBP23.33■■□□□ 1.33
LIMD2-209ENST00000580222 FBXO28Q9NVF7 368 aa23.33■■□□□ 1.33
LIMD2-209ENST00000580222 CXXC1Q9P0U4 656 aaPredicted RBP23.33■■□□□ 1.33
LIMD2-209ENST00000580222 SYNRGQ9UMZ2 1314 aa23.33■■□□□ 1.32
LIMD2-209ENST00000580222 IGSF3O75054 1194 aa23.32■■□□□ 1.32
LIMD2-209ENST00000580222 RAB11FIP3O75154 756 aa23.32■■□□□ 1.32
LIMD2-209ENST00000580222 POLR3DP05423 398 aaPredicted RBP23.32■■□□□ 1.32
LIMD2-209ENST00000580222 NKX2-4Q9H2Z4 354 aa23.32■■□□□ 1.32
LIMD2-209ENST00000580222 DCTPP1Q9H773 170 aa23.32■■□□□ 1.32
LIMD2-209ENST00000580222 YBX2Q9Y2T7 364 aaKnown RBP23.32■■□□□ 1.32
LIMD2-209ENST00000580222 MYH1P12882 1939 aa23.31■■□□□ 1.32
LIMD2-209ENST00000580222 ROBO3Q96MS0 1386 aa23.31■■□□□ 1.32
LIMD2-209ENST00000580222 SMIM22K7EJ46 135 aa23.31■■□□□ 1.32
LIMD2-209ENST00000580222 AKR1A1P14550 325 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms