RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 ZAP70P43403 619 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 KCNQ1P51787 676 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 ACLYP53396 1101 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 ZNF365Q70YC5 407 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 REPS2Q8NFH8 660 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 ATG4CQ96DT6 458 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 FEZ1Q99689 392 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 DBNDD2Q9BQY9 259 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 C1QTNF1Q9BXJ1 281 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 SYNRGQ9UMZ2 1314 aa13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 CCER2I3L3R5 266 aa13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 IGSF3O75054 1194 aa13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 SNAI1O95863 264 aaPredicted RBP13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 ACRP10323 421 aa13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 RARBP10826 455 aa13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 POU3F3P20264 500 aaPredicted RBP13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 HERVK_113Q902F9 699 aa13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 RIOK1Q9BRS2 568 aaKnown RBP13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 GPR108Q9NPR9 543 aa13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 DIS3Q9Y2L1 958 aaKnown RBP13.69□□□□□ -0.22
SUPT4H1-203ENST00000579289 TLL1O43897 1013 aa13.68□□□□□ -0.22
SUPT4H1-203ENST00000579289 CD4P01730 458 aa13.68□□□□□ -0.22
SUPT4H1-203ENST00000579289 PGK2P07205 417 aa13.68□□□□□ -0.22
SUPT4H1-203ENST00000579289 KCNA10Q16322 511 aa13.68□□□□□ -0.22
SUPT4H1-203ENST00000579289 RNF180Q86T96 592 aa13.68□□□□□ -0.22
SUPT4H1-203ENST00000579289 FAM126BQ8IXS8 530 aa13.68□□□□□ -0.22
SUPT4H1-203ENST00000579289 MIGA1Q8NAN2 632 aa13.68□□□□□ -0.22
SUPT4H1-203ENST00000579289 NKX2-4Q9H2Z4 354 aa13.68□□□□□ -0.22
SUPT4H1-203ENST00000579289 ELP1O95163 1332 aa13.67□□□□□ -0.22
SUPT4H1-203ENST00000579289 E9PSI1 815 aa13.67□□□□□ -0.22
SUPT4H1-203ENST00000579289 CST5P28325 142 aaPredicted RBP13.67□□□□□ -0.22
SUPT4H1-203ENST00000579289 NKX3-2P78367 333 aa13.67□□□□□ -0.22
SUPT4H1-203ENST00000579289 ATF7IPQ6VMQ6 1270 aa13.67□□□□□ -0.22
SUPT4H1-203ENST00000579289 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
SUPT4H1-203ENST00000579289 SLC43A3Q8NBI5 491 aa13.67□□□□□ -0.22
SUPT4H1-203ENST00000579289 FGD4Q96M96 766 aa13.67□□□□□ -0.22
SUPT4H1-203ENST00000579289 STARD7Q9NQZ5 370 aa13.67□□□□□ -0.22
SUPT4H1-203ENST00000579289 ZNF214Q9UL59 606 aaPredicted RBP13.67□□□□□ -0.22
SUPT4H1-203ENST00000579289 UMODL1Q5DID0 1318 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 DNAJC25-GNG10A0A024R161 153 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 MOXD2PA6NHM9 499 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 DCDC2CA8MYV0 355 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 SMIM22K7EJ46 135 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 ERC2O15083 957 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 AKR1A1P14550 325 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 MYOGP15173 224 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 CYP7A1P22680 504 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 PPIGQ13427 754 aaKnown RBP eCLIP13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 TNNI3KQ59H18 835 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 MAMDC4Q6UXC1 1216 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 NCAPG2Q86XI2 1143 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 RIOX2Q8IUF8 465 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 CLEC10AQ8IUN9 316 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 NOL10Q9BSC4 688 aaKnown RBP13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 TRIM34Q9BYJ4 488 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 ANTXR1Q9H6X2 564 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 CD320Q9NPF0 282 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 SMC4Q9NTJ3 1288 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 TLR7Q9NYK1 1049 aaKnown RBP13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 DBNLQ9UJU6 430 aaKnown RBP13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 TNNQ9UQP3 1299 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 FPGT-TNNI3KV9GXZ4 949 aa13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 PRRC2BQ5JSZ5 2229 aaKnown RBP13.66□□□□□ -0.22
SUPT4H1-203ENST00000579289 MUC6Q6W4X9 2439 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 GPR37L1O60883 481 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 FCER1AP12319 257 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 IGFBP4P22692 258 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 POLA2Q14181 598 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 GORABQ5T7V8 394 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 KATNBL1Q9H079 304 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 UPF3AQ9H1J1 476 aaKnown RBP13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 IL23AQ9NPF7 189 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 FBXO28Q9NVF7 368 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 SLC5A4Q9NY91 659 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 TMX2Q9Y320 296 aa13.65□□□□□ -0.22
SUPT4H1-203ENST00000579289 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
SUPT4H1-203ENST00000579289 EPOPA6NHQ4 379 aa13.64□□□□□ -0.23
SUPT4H1-203ENST00000579289 ARVCFO00192 962 aa13.64□□□□□ -0.23
SUPT4H1-203ENST00000579289 SLC25A27O95847 323 aa13.64□□□□□ -0.23
SUPT4H1-203ENST00000579289 ASGR1P07306 291 aa13.64□□□□□ -0.23
SUPT4H1-203ENST00000579289 TTC6Q86TZ1 520 aa13.64□□□□□ -0.23
SUPT4H1-203ENST00000579289 TANGO6Q9C0B7 1094 aa13.64□□□□□ -0.23
SUPT4H1-203ENST00000579289 CABP5Q9NP86 173 aa13.64□□□□□ -0.23
SUPT4H1-203ENST00000579289 MTCH2Q9Y6C9 303 aa13.64□□□□□ -0.23
SUPT4H1-203ENST00000579289 LRRC37A2A6NM11 1700 aa13.64□□□□□ -0.23
SUPT4H1-203ENST00000579289 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 RFXAPO00287 272 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 DUSP11O75319 330 aaKnown RBP13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 ARHGEF15O94989 841 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 CYP2C18P33260 490 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 RABGGTBP53611 331 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 RAB30Q15771 203 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 TTC39AQ5SRH9 613 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 DIEXFQ68CQ4 756 aaKnown RBP13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 PSRC1Q6PGN9 363 aaPredicted RBP13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 CCDC129Q6ZRS4 1044 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 NUP133Q8WUM0 1156 aa13.63□□□□□ -0.23
SUPT4H1-203ENST00000579289 MMP19Q99542 508 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms