RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 USP17L21D6R901 530 aa23.11■■□□□ 1.29
CDKN2A-213ENST00000579122 TMEM132BQ14DG7 1078 aa23.11■■□□□ 1.29
CDKN2A-213ENST00000579122 SNX17Q15036 470 aa23.11■■□□□ 1.29
CDKN2A-213ENST00000579122 PRAMEF19Q5SWL8 479 aa23.11■■□□□ 1.29
CDKN2A-213ENST00000579122 NRBP1Q9UHY1 535 aa23.11■■□□□ 1.29
CDKN2A-213ENST00000579122 COG6Q9Y2V7 657 aa23.11■■□□□ 1.29
CDKN2A-213ENST00000579122 SMIM22K7EJ46 135 aa23.1■■□□□ 1.29
CDKN2A-213ENST00000579122 EEF2P13639 858 aaKnown RBP23.1■■□□□ 1.29
CDKN2A-213ENST00000579122 YTHDC1Q96MU7 727 aaKnown RBP23.1■■□□□ 1.29
CDKN2A-213ENST00000579122 CHMP4BQ9H444 224 aaKnown RBP23.1■■□□□ 1.29
CDKN2A-213ENST00000579122 KANSL2Q9H9L4 492 aa23.1■■□□□ 1.29
CDKN2A-213ENST00000579122 LTBP2Q14767 1821 aa23.1■■□□□ 1.29
CDKN2A-213ENST00000579122 PARP14Q460N5 1801 aa23.1■■□□□ 1.29
CDKN2A-213ENST00000579122 CUL9Q8IWT3 2517 aa23.1■■□□□ 1.29
CDKN2A-213ENST00000579122 BAZ2AQ9UIF9 1905 aaKnown RBP23.1■■□□□ 1.29
CDKN2A-213ENST00000579122 LRRC41Q15345 812 aa23.09■■□□□ 1.29
CDKN2A-213ENST00000579122 C1orf53Q5VUE5 145 aa23.09■■□□□ 1.29
CDKN2A-213ENST00000579122 ZSCAN25Q6NSZ9 544 aa23.09■■□□□ 1.29
CDKN2A-213ENST00000579122 SAMD1Q6SPF0 538 aaPredicted RBP23.09■■□□□ 1.29
CDKN2A-213ENST00000579122 RIOX2Q8IUF8 465 aa23.09■■□□□ 1.29
CDKN2A-213ENST00000579122 SLC4A4Q9Y6R1 1079 aa23.09■■□□□ 1.29
CDKN2A-213ENST00000579122 MYCNP04198 464 aaPredicted RBP23.08■■□□□ 1.29
CDKN2A-213ENST00000579122 ADCYAP1R1P41586 468 aa23.08■■□□□ 1.29
CDKN2A-213ENST00000579122 TRIM60Q495X7 471 aa23.08■■□□□ 1.29
CDKN2A-213ENST00000579122 MMP19Q99542 508 aa23.08■■□□□ 1.29
CDKN2A-213ENST00000579122 GOPCQ9HD26 462 aa23.08■■□□□ 1.29
CDKN2A-213ENST00000579122 CHGBP05060 677 aa23.07■■□□□ 1.28
CDKN2A-213ENST00000579122 FAM47AQ5JRC9 791 aa23.07■■□□□ 1.28
CDKN2A-213ENST00000579122 CTR9Q6PD62 1173 aa23.07■■□□□ 1.28
CDKN2A-213ENST00000579122 GUCD1Q96NT3 240 aa23.07■■□□□ 1.28
CDKN2A-213ENST00000579122 PRDM5Q9NQX1 630 aaPredicted RBP23.07■■□□□ 1.28
CDKN2A-213ENST00000579122 FBXO28Q9NVF7 368 aa23.07■■□□□ 1.28
CDKN2A-213ENST00000579122 PPP1R9AQ9ULJ8 1098 aa23.07■■□□□ 1.28
CDKN2A-213ENST00000579122 DIS3Q9Y2L1 958 aaKnown RBP23.07■■□□□ 1.28
CDKN2A-213ENST00000579122 VWA5AO00534 786 aa23.06■■□□□ 1.28
CDKN2A-213ENST00000579122 COPB2P35606 906 aa23.06■■□□□ 1.28
CDKN2A-213ENST00000579122 STAT3P40763 770 aa23.06■■□□□ 1.28
CDKN2A-213ENST00000579122 KCTD2Q14681 263 aa23.06■■□□□ 1.28
CDKN2A-213ENST00000579122 TINF2Q9BSI4 451 aa23.06■■□□□ 1.28
CDKN2A-213ENST00000579122 PUS7LQ9H0K6 701 aaKnown RBP23.06■■□□□ 1.28
CDKN2A-213ENST00000579122 XPNPEP3Q9NQH7 507 aa23.06■■□□□ 1.28
CDKN2A-213ENST00000579122 PDLIM7Q9NR12 457 aa23.06■■□□□ 1.28
CDKN2A-213ENST00000579122 ARPP21Q9UBL0 812 aaPredicted RBP23.06■■□□□ 1.28
CDKN2A-213ENST00000579122 PHF24Q9UPV7 400 aa23.06■■□□□ 1.28
CDKN2A-213ENST00000579122 ROBO3Q96MS0 1386 aa23.05■■□□□ 1.28
CDKN2A-213ENST00000579122 PGK2P07205 417 aa23.05■■□□□ 1.28
CDKN2A-213ENST00000579122 RARBP10826 455 aa23.05■■□□□ 1.28
CDKN2A-213ENST00000579122 ZNF792Q3KQV3 632 aa23.05■■□□□ 1.28
CDKN2A-213ENST00000579122 BADQ92934 168 aa23.05■■□□□ 1.28
CDKN2A-213ENST00000579122 FERMT2Q96AC1 680 aa23.05■■□□□ 1.28
CDKN2A-213ENST00000579122 ZNF214Q9UL59 606 aaPredicted RBP23.05■■□□□ 1.28
CDKN2A-213ENST00000579122 MYH7P12883 1935 aa23.04■■□□□ 1.28
CDKN2A-213ENST00000579122 COL11A1P12107 1806 aaPredicted RBP23.04■■□□□ 1.28
CDKN2A-213ENST00000579122 SHHQ15465 462 aa23.04■■□□□ 1.28
CDKN2A-213ENST00000579122 FAM83BQ5T0W9 1011 aa23.04■■□□□ 1.28
CDKN2A-213ENST00000579122 ZNF697Q5TEC3 545 aa23.04■■□□□ 1.28
CDKN2A-213ENST00000579122 RNF180Q86T96 592 aa23.04■■□□□ 1.28
CDKN2A-213ENST00000579122 REPS2Q8NFH8 660 aa23.04■■□□□ 1.28
CDKN2A-213ENST00000579122 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.04■■□□□ 1.28
CDKN2A-213ENST00000579122 LRRCC1Q9C099 1032 aa23.04■■□□□ 1.28
CDKN2A-213ENST00000579122 ZNFX1Q9P2E3 1918 aaKnown RBP23.04■■□□□ 1.28
CDKN2A-213ENST00000579122 TRIM43BA6NCK2 446 aa23.02■■□□□ 1.28
CDKN2A-213ENST00000579122 RAD21O60216 631 aa23.02■■□□□ 1.28
CDKN2A-213ENST00000579122 TLE2Q04725 743 aa23.02■■□□□ 1.28
CDKN2A-213ENST00000579122 SBK1Q52WX2 424 aa23.02■■□□□ 1.28
CDKN2A-213ENST00000579122 C9orf50Q5SZB4 431 aa23.02■■□□□ 1.28
CDKN2A-213ENST00000579122 SH3RF1Q7Z6J0 888 aa23.02■■□□□ 1.28
CDKN2A-213ENST00000579122 TRIM43Q96BQ3 446 aaPredicted RBP23.02■■□□□ 1.28
CDKN2A-213ENST00000579122 FAM161BQ96MY7 647 aa23.02■■□□□ 1.28
CDKN2A-213ENST00000579122 STRBPQ96SI9 672 aaKnown RBP23.02■■□□□ 1.28
CDKN2A-213ENST00000579122 ZNF865P0CJ78 1059 aaPredicted RBP23.01■■□□□ 1.27
CDKN2A-213ENST00000579122 GIMAP6Q6P9H5 292 aa23.01■■□□□ 1.27
CDKN2A-213ENST00000579122 SLF1Q9BQI6 1058 aa23.01■■□□□ 1.27
CDKN2A-213ENST00000579122 TACC3Q9Y6A5 838 aa23.01■■□□□ 1.27
CDKN2A-213ENST00000579122 GREB1LQ9C091 1923 aaPredicted RBP23.01■■□□□ 1.27
CDKN2A-213ENST00000579122 PGK1P00558 417 aa23■■□□□ 1.27
CDKN2A-213ENST00000579122 AKR1A1P14550 325 aa23■■□□□ 1.27
CDKN2A-213ENST00000579122 TAL1P17542 331 aaPredicted RBP23■■□□□ 1.27
CDKN2A-213ENST00000579122 RASA1P20936 1047 aa23■■□□□ 1.27
CDKN2A-213ENST00000579122 MSL3Q8N5Y2 521 aaKnown RBP23■■□□□ 1.27
CDKN2A-213ENST00000579122 TEX13BQ9BXU2 312 aa23■■□□□ 1.27
CDKN2A-213ENST00000579122 ECHDC1Q9NTX5 307 aa23■■□□□ 1.27
CDKN2A-213ENST00000579122 NYAP2Q9P242 653 aa23■■□□□ 1.27
CDKN2A-213ENST00000579122 CNPY2Q9Y2B0 182 aa23■■□□□ 1.27
CDKN2A-213ENST00000579122 PLXNA1Q9UIW2 1896 aa23■■□□□ 1.27
CDKN2A-213ENST00000579122 GSG1L2A8MUP6 293 aa22.99■■□□□ 1.27
CDKN2A-213ENST00000579122 SMARCA5O60264 1052 aaPredicted RBP22.99■■□□□ 1.27
CDKN2A-213ENST00000579122 CLTBP09497 229 aa22.99■■□□□ 1.27
CDKN2A-213ENST00000579122 SMAD3P84022 425 aaKnown RBP22.99■■□□□ 1.27
CDKN2A-213ENST00000579122 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.99■■□□□ 1.27
CDKN2A-213ENST00000579122 MKNK2Q9HBH9 465 aa22.99■■□□□ 1.27
CDKN2A-213ENST00000579122 EYSQ5T1H1 3165 aa22.99■■□□□ 1.27
CDKN2A-213ENST00000579122 CDH23Q9H251 3354 aa22.98■■□□□ 1.27
CDKN2A-213ENST00000579122 A0A1W2PQ45 241 aaPredicted RBP22.98■■□□□ 1.27
CDKN2A-213ENST00000579122 A0A1W2PQY0 241 aa22.98■■□□□ 1.27
CDKN2A-213ENST00000579122 F5H6K3 240 aa22.98■■□□□ 1.27
CDKN2A-213ENST00000579122 KLRC3Q07444 240 aa22.98■■□□□ 1.27
CDKN2A-213ENST00000579122 NUP88Q99567 741 aaPredicted RBP22.98■■□□□ 1.27
CDKN2A-213ENST00000579122 TSEN34Q9BSV6 310 aaKnown RBP22.98■■□□□ 1.27
CDKN2A-213ENST00000579122 SEMA6BQ9H3T3 888 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms