RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ATG4CQ96DT6 458 aa7.73□□□□□ -1.17
TRAF4-213ENST00000578917 ZNF333Q96JL9 665 aa7.73□□□□□ -1.17
TRAF4-213ENST00000578917 DSCC1Q9BVC3 393 aa7.73□□□□□ -1.17
TRAF4-213ENST00000578917 MOV10L1Q9BXT6 1211 aaKnown RBP7.73□□□□□ -1.17
TRAF4-213ENST00000578917 SPATC1LQ9H0A9 340 aa7.73□□□□□ -1.17
TRAF4-213ENST00000578917 PORCNQ9H237 461 aa7.73□□□□□ -1.17
TRAF4-213ENST00000578917 MROH8Q9H579 483 aa7.73□□□□□ -1.17
TRAF4-213ENST00000578917 FBXO28Q9NVF7 368 aa7.73□□□□□ -1.17
TRAF4-213ENST00000578917 SLC5A4Q9NY91 659 aa7.73□□□□□ -1.17
TRAF4-213ENST00000578917 BTBD7Q9P203 1132 aa7.73□□□□□ -1.17
TRAF4-213ENST00000578917 FEM1BQ9UK73 627 aa7.73□□□□□ -1.17
TRAF4-213ENST00000578917 U3KPZ7 1027 aaPredicted RBP7.73□□□□□ -1.17
TRAF4-213ENST00000578917 SLC15A5A6NIM6 579 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 TMEM232C9JQI7 657 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 VWA5AO00534 786 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 STRNO43815 780 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 KDM4AO75164 1064 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 SLC25A27O95847 323 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 TFRCP02786 760 aaKnown RBP7.72□□□□□ -1.17
TRAF4-213ENST00000578917 INHAP05111 366 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 FCER1AP12319 257 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 ERCC3P19447 782 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 EN2P19622 333 aaPredicted RBP7.72□□□□□ -1.17
TRAF4-213ENST00000578917 KCTD2Q14681 263 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 CCDC178Q5BJE1 867 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 MFSD14CQ5VZR4 134 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 IQCA1Q86XH1 822 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 TRMT44Q8IYL2 757 aaKnown RBP7.72□□□□□ -1.17
TRAF4-213ENST00000578917 GMCL1P1Q8NEA9 526 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 NKX2-3Q8TAU0 364 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 TTC14Q96N46 770 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 UBAC1Q9BSL1 405 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 KRT23Q9C075 422 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 CNNM2Q9H8M5 875 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 IL17RBQ9NRM6 502 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 GJD2Q9UKL4 321 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 PPP1R9AQ9ULJ8 1098 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 SYNPO2Q9UMS6 1093 aa7.72□□□□□ -1.17
TRAF4-213ENST00000578917 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.72□□□□□ -1.17
TRAF4-213ENST00000578917 DOCK1Q14185 1865 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 IGKV6D-41A0A0C4DH26 115 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 POTEFA5A3E0 1075 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 CNMDO75829 334 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 HMGCRP04035 888 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 TOP1P11387 765 aaKnown RBP7.71□□□□□ -1.18
TRAF4-213ENST00000578917 XRCC5P13010 732 aaKnown RBP7.71□□□□□ -1.18
TRAF4-213ENST00000578917 ZKSCAN1P17029 563 aaPredicted RBP7.71□□□□□ -1.18
TRAF4-213ENST00000578917 PTPREP23469 700 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 CNGA1P29973 690 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 RGS19P49795 217 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 STAT2P52630 851 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 MAP2K5Q13163 448 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 TMEM132BQ14DG7 1078 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 MTFR1Q15390 333 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 RCSD1Q6JBY9 416 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 POTEEQ6S8J3 1075 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 KCTD1Q719H9 257 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 RALYLQ86SE5 291 aaKnown RBP7.71□□□□□ -1.18
TRAF4-213ENST00000578917 TBC1D10CQ8IV04 446 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 STAG1Q8WVM7 1258 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 DDX11Q96FC9 970 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 GMCL1Q96IK5 515 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 ZKSCAN3Q9BRR0 538 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 KAT14Q9H8E8 782 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 HMX1Q9NP08 348 aaPredicted RBP7.71□□□□□ -1.18
TRAF4-213ENST00000578917 PCDH10Q9P2E7 1040 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 MYH1P12882 1939 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 ZMYM6O95789 1325 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 RAD50Q92878 1312 aa7.71□□□□□ -1.18
TRAF4-213ENST00000578917 ERICH2A1L162 156 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 B4E1Z4 1266 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 SGSM2O43147 1006 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 DHX16O60231 1041 aaKnown RBP7.7□□□□□ -1.18
TRAF4-213ENST00000578917 GJB1P08034 283 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 FGRP09769 529 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 FDX1P10109 184 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 ADORA2AP29274 412 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 COPB2P35606 906 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 NT5C2P49902 561 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 PTH1RQ03431 593 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 SART3Q15020 963 aaKnown RBP7.7□□□□□ -1.18
TRAF4-213ENST00000578917 BMP2KLQ5H9B9 411 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 SNRNP48Q6IEG0 339 aaKnown RBP7.7□□□□□ -1.18
TRAF4-213ENST00000578917 FAM160B2Q86V87 743 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 SKAP1Q86WV1 359 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 ANKRD35Q8N283 1001 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 SHCBP1Q8NEM2 672 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 DCAF4Q8WV16 495 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 DEFB118Q96PH6 123 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 ZSCAN10Q96SZ4 725 aaPredicted RBP7.7□□□□□ -1.18
TRAF4-213ENST00000578917 MMP19Q99542 508 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 APBA2Q99767 749 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 TMEM47Q9BQJ4 181 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 TEX13BQ9BXU2 312 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 UNC93B1Q9H1C4 597 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 RAVER2Q9HCJ3 691 aaKnown RBP7.7□□□□□ -1.18
TRAF4-213ENST00000578917 GPCPD1Q9NPB8 672 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 ANO2Q9NQ90 1003 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 HOMER2Q9NSB8 354 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 TCP11L1Q9NUJ3 509 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms