RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 NMIQ13287 307 aaPredicted RBP8.36□□□□□ -1.07
DDX42-207ENST00000578593 CCDC40Q4G0X9 1142 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 EMC10Q5UCC4 262 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 ZNF662Q6ZS27 426 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 NCCRP1Q6ZVX7 275 aaPredicted RBP8.36□□□□□ -1.07
DDX42-207ENST00000578593 RSRC2Q7L4I2 434 aaKnown RBP8.36□□□□□ -1.07
DDX42-207ENST00000578593 FNBP4Q8N3X1 1017 aaPredicted RBP8.36□□□□□ -1.07
DDX42-207ENST00000578593 CENPHQ9H3R5 247 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 FAM204AQ9H8W3 233 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 TIMM22Q9Y584 194 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 LRRC37A3O60309 1634 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 VWA3AA6NCI4 1184 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 ZSCAN12O43309 604 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 EIF2S2P20042 333 aaKnown RBP8.36□□□□□ -1.07
DDX42-207ENST00000578593 PPP2R3AQ06190 1150 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 PSME1Q06323 249 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 MTHFSDQ2M296 383 aaKnown RBP8.36□□□□□ -1.07
DDX42-207ENST00000578593 NUGGCQ68CJ6 796 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 KANK3Q6NY19 840 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 FAM117BQ6P1L5 589 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 UBE2Q1Q7Z7E8 422 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.36□□□□□ -1.07
DDX42-207ENST00000578593 ZBTB8BQ8NAP8 495 aaPredicted RBP8.36□□□□□ -1.07
DDX42-207ENST00000578593 WDR24Q96S15 920 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 SDF4Q9BRK5 362 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 MAK16Q9BXY0 300 aaKnown RBP8.36□□□□□ -1.07
DDX42-207ENST00000578593 PREBQ9HCU5 417 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 ECHDC1Q9NTX5 307 aa8.36□□□□□ -1.07
DDX42-207ENST00000578593 PAIP2BQ9ULR5 123 aaKnown RBP8.36□□□□□ -1.07
DDX42-207ENST00000578593 A6NHS1 94 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 SMIM24O75264 130 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 ATP1A3P13637 1013 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 FOSL1P15407 271 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 LMOD1P29536 600 aaPredicted RBP8.35□□□□□ -1.07
DDX42-207ENST00000578593 ME1P48163 572 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 GNAQP50148 359 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 OXCT1P55809 520 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 THOC7Q6I9Y2 204 aaKnown RBP8.35□□□□□ -1.07
DDX42-207ENST00000578593 C1orf131Q8NDD1 294 aaKnown RBP8.35□□□□□ -1.07
DDX42-207ENST00000578593 CCDC68Q9H2F9 335 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 PCMTD2Q9NV79 361 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 ZNHIT6Q9NWK9 470 aaKnown RBP8.35□□□□□ -1.07
DDX42-207ENST00000578593 GMEB1Q9Y692 573 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 TOPAZ1Q8N9V7 1692 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 A0A0D9SFI3 127 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 CCDC151A5D8V7 595 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 BIN1O00499 593 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 NEK2P51955 445 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 PPP4CP60510 307 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 COL19A1Q14993 1142 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 NCAPHQ15003 741 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 PTPN21Q16825 1174 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 NEK10Q6ZWH5 1172 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 RABGGTAQ92696 567 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 PHAXQ9H814 394 aaKnown RBP8.35□□□□□ -1.07
DDX42-207ENST00000578593 PXDNLA1KZ92 1463 aa8.35□□□□□ -1.07
DDX42-207ENST00000578593 A0A1B0GVL5 298 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 ANKRD62A6NC57 917 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 GOLGA6L9A6NEM1 432 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 P4HA2O15460 535 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 SHOX2O60902 331 aaPredicted RBP8.34□□□□□ -1.07
DDX42-207ENST00000578593 LDHAP00338 332 aaKnown RBP8.34□□□□□ -1.07
DDX42-207ENST00000578593 HOXD12P35452 270 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 GNG11P61952 73 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 PLCB4Q15147 1175 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 ACCSLQ4AC99 568 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 PARP10Q53GL7 1025 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 FBXO31Q5XUX0 539 aaPredicted RBP8.34□□□□□ -1.07
DDX42-207ENST00000578593 FMR1NBQ8N0W7 255 aaPredicted RBP8.34□□□□□ -1.07
DDX42-207ENST00000578593 GBP7Q8N8V2 638 aaPredicted RBP8.34□□□□□ -1.07
DDX42-207ENST00000578593 PMM1Q92871 262 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 MPHOSPH8Q99549 860 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 ALDH8A1Q9H2A2 487 aaPredicted RBP8.34□□□□□ -1.07
DDX42-207ENST00000578593 RPAP3Q9H6T3 665 aaPredicted RBP8.34□□□□□ -1.07
DDX42-207ENST00000578593 SLC40A1Q9NP59 571 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 ZMAT5Q9UDW3 170 aaKnown RBP8.34□□□□□ -1.07
DDX42-207ENST00000578593 SWAP70Q9UH65 585 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 PRELID1Q9Y255 219 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 COMMD10Q9Y6G5 202 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 ATP4AP20648 1035 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 MATR3P43243 847 aaKnown RBP eCLIP8.34□□□□□ -1.07
DDX42-207ENST00000578593 FANCCQ00597 558 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 AGAP9Q5VTM2 703 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 HDXQ7Z353 690 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 ENOX1Q8TC92 643 aaKnown RBP8.34□□□□□ -1.07
DDX42-207ENST00000578593 NSMCE1Q8WV22 266 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 DPF2Q92785 391 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 SIL1Q9H173 461 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 TAOK3Q9H2K8 898 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 ZSWIM4Q9H7M6 989 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 TUBA8Q9NY65 449 aaPredicted RBP8.34□□□□□ -1.07
DDX42-207ENST00000578593 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 PPP2R2CQ9Y2T4 447 aa8.34□□□□□ -1.07
DDX42-207ENST00000578593 NEDD4P46934 1319 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 MSL3P1P0C860 447 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 MCM3P25205 808 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 EIF2B5Q13144 721 aaKnown RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 MAP7D1Q3KQU3 841 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 TMCO5AQ8N6Q1 288 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 HVCN1Q96D96 273 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms