RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ERO1AQ96HE7 468 aa25.55■■□□□ 1.68
CDC42EP4-203ENST00000578516 TRIM47Q96LD4 638 aa25.55■■□□□ 1.68
CDC42EP4-203ENST00000578516 TRIM17Q9Y577 477 aa25.55■■□□□ 1.68
CDC42EP4-203ENST00000578516 FRMPD2Q68DX3 1309 aaPredicted RBP25.55■■□□□ 1.68
CDC42EP4-203ENST00000578516 SMCHD1A6NHR9 2005 aa25.54■■□□□ 1.68
CDC42EP4-203ENST00000578516 GCLCP48506 637 aaPredicted RBP25.54■■□□□ 1.68
CDC42EP4-203ENST00000578516 FAM110CQ1W6H9 321 aa25.54■■□□□ 1.68
CDC42EP4-203ENST00000578516 ADCK5Q3MIX3 580 aa25.54■■□□□ 1.68
CDC42EP4-203ENST00000578516 OTOP1Q7RTM1 612 aa25.54■■□□□ 1.68
CDC42EP4-203ENST00000578516 DSG3P32926 999 aa25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 TRDNQ13061 729 aa25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 SEC23AQ15436 765 aa25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 CCDC96Q2M329 555 aa25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 CTU1Q7Z7A3 348 aaKnown RBP25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 IQCA1Q86XH1 822 aa25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 TCEANC2Q96MN5 208 aa25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 UBAC1Q9BSL1 405 aa25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 LRRC2Q9BYS8 371 aa25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 PORCNQ9H237 461 aa25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 MORF4L1Q9UBU8 362 aa25.53■■□□□ 1.68
CDC42EP4-203ENST00000578516 BMP3P12645 472 aa25.52■■□□□ 1.68
CDC42EP4-203ENST00000578516 PSMC4P43686 418 aa25.52■■□□□ 1.68
CDC42EP4-203ENST00000578516 ERVK-9P63128 1117 aa25.52■■□□□ 1.68
CDC42EP4-203ENST00000578516 ERVK-24P63145 666 aa25.52■■□□□ 1.68
CDC42EP4-203ENST00000578516 COG2Q14746 738 aa25.52■■□□□ 1.68
CDC42EP4-203ENST00000578516 TTBK2Q6IQ55 1244 aa25.52■■□□□ 1.68
CDC42EP4-203ENST00000578516 REC8O95072 547 aa25.51■■□□□ 1.67
CDC42EP4-203ENST00000578516 CPA1P15085 419 aa25.51■■□□□ 1.67
CDC42EP4-203ENST00000578516 TAL1P17542 331 aaPredicted RBP25.51■■□□□ 1.67
CDC42EP4-203ENST00000578516 SNAP25P60880 206 aa25.51■■□□□ 1.67
CDC42EP4-203ENST00000578516 MCOLN1Q9GZU1 580 aa25.51■■□□□ 1.67
CDC42EP4-203ENST00000578516 PPP1R9AQ9ULJ8 1098 aa25.51■■□□□ 1.67
CDC42EP4-203ENST00000578516 TMEM232C9JQI7 657 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 IFIT3O14879 490 aaKnown RBP25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 SEC24BO95487 1268 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 PDHBP11177 359 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 HSPA4P34932 840 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 SLC1A4P43007 532 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 LBX2Q6XYB7 198 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 KIFC2Q96AC6 838 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 GMCL1Q96IK5 515 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 SLF1Q9BQI6 1058 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 CPVLQ9H3G5 476 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 EFCC1Q9HA90 598 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 GPCPD1Q9NPB8 672 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 SYNPO2Q9UMS6 1093 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 SNX14Q9Y5W7 946 aa25.5■■□□□ 1.67
CDC42EP4-203ENST00000578516 MYH6P13533 1939 aa25.49■■□□□ 1.67
CDC42EP4-203ENST00000578516 PRC1O43663 620 aa25.49■■□□□ 1.67
CDC42EP4-203ENST00000578516 FMNL1O95466 1100 aaPredicted RBP25.49■■□□□ 1.67
CDC42EP4-203ENST00000578516 GOLGA8HP0CJ92 632 aa25.49■■□□□ 1.67
CDC42EP4-203ENST00000578516 SLC16A2P36021 539 aa25.49■■□□□ 1.67
CDC42EP4-203ENST00000578516 PPP4R3BQ5MIZ7 849 aa25.49■■□□□ 1.67
CDC42EP4-203ENST00000578516 DGKHQ86XP1 1220 aa25.49■■□□□ 1.67
CDC42EP4-203ENST00000578516 PNMA1Q8ND90 353 aa25.49■■□□□ 1.67
CDC42EP4-203ENST00000578516 GABRQQ9UN88 632 aa25.49■■□□□ 1.67
CDC42EP4-203ENST00000578516 ZNFX1Q9P2E3 1918 aaKnown RBP25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 TMEM132BQ14DG7 1078 aa25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 IFIT1BQ5T764 474 aaKnown RBP25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 RNF20Q5VTR2 975 aa25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 REPS2Q8NFH8 660 aa25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 GPRC5AQ8NFJ5 357 aa25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 ANKS1AQ92625 1134 aa25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 TTC14Q96N46 770 aa25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 USP26Q9BXU7 913 aa25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 KAT14Q9H8E8 782 aa25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 RABGAP1Q9Y3P9 1069 aa25.48■■□□□ 1.67
CDC42EP4-203ENST00000578516 IKQ13123 557 aaPredicted RBP25.47■■□□□ 1.67
CDC42EP4-203ENST00000578516 PLS1Q14651 629 aa25.47■■□□□ 1.67
CDC42EP4-203ENST00000578516 KIF22Q14807 665 aa25.47■■□□□ 1.67
CDC42EP4-203ENST00000578516 C8orf34Q49A92 452 aa25.47■■□□□ 1.67
CDC42EP4-203ENST00000578516 TMEM67Q5HYA8 995 aa25.47■■□□□ 1.67
CDC42EP4-203ENST00000578516 DCAF4Q8WV16 495 aa25.47■■□□□ 1.67
CDC42EP4-203ENST00000578516 KCNB2Q92953 911 aa25.47■■□□□ 1.67
CDC42EP4-203ENST00000578516 MYPNQ86TC9 1320 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 VWA5AO00534 786 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 TNPO2O14787 897 aaKnown RBP25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 FCGRTP55899 365 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 PRKCZQ05513 592 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 RAB11FIP4Q86YS3 637 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 TNS4Q8IZW8 715 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 IGDCC4Q8TDY8 1250 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 MYL10Q9BUA6 226 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 MOV10L1Q9BXT6 1211 aaKnown RBP25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 HOXC10Q9NYD6 342 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 FEM1BQ9UK73 627 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 ADAMTS5Q9UNA0 930 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 PTCH2Q9Y6C5 1203 aa25.46■■□□□ 1.67
CDC42EP4-203ENST00000578516 BAZ2BQ9UIF8 2168 aaKnown RBP25.45■■□□□ 1.67
CDC42EP4-203ENST00000578516 ZNF543Q08ER8 600 aa25.45■■□□□ 1.66
CDC42EP4-203ENST00000578516 WTAPQ15007 396 aa25.45■■□□□ 1.66
CDC42EP4-203ENST00000578516 WDR78Q5VTH9 848 aa25.45■■□□□ 1.66
CDC42EP4-203ENST00000578516 GTF3C2Q8WUA4 911 aaPredicted RBP25.45■■□□□ 1.66
CDC42EP4-203ENST00000578516 JAKMIP1Q96N16 626 aaKnown RBP25.45■■□□□ 1.66
CDC42EP4-203ENST00000578516 NEK1Q96PY6 1258 aa25.45■■□□□ 1.66
CDC42EP4-203ENST00000578516 SPATC1LQ9H0A9 340 aa25.45■■□□□ 1.66
CDC42EP4-203ENST00000578516 LY9Q9HBG7 655 aa25.45■■□□□ 1.66
CDC42EP4-203ENST00000578516 SH2B2O14492 632 aaPredicted RBP25.44■■□□□ 1.66
CDC42EP4-203ENST00000578516 SNHG28P0DPA3 235 aa25.44■■□□□ 1.66
CDC42EP4-203ENST00000578516 STAT2P52630 851 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms