RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 COLQQ9Y215 455 aaPredicted RBP16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 IGHA2P01877 340 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 CYP2C19P33261 490 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 PPARAQ07869 468 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 FAM47AQ5JRC9 791 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 LHX8Q68G74 356 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 MB21D1Q8N884 522 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 SHCBP1Q8NEM2 672 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 EVI5LQ96CN4 794 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 CEP95Q96GE4 821 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 FAM227BQ96M60 508 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 NACAP1Q9BZK3 213 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 NAPBQ9H115 298 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 NYAP2Q9P242 653 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 TACC3Q9Y6A5 838 aa16.2■□□□□ 0.18
CUEDC1-204ENST00000577497 FRMPD3Q5JV73 1810 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 A0A0D9SFI3 127 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 F5H6K3 240 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 COBLO75128 1261 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 NDUFB10O96000 172 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 KLRC3Q07444 240 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 NCAPG2Q86XI2 1143 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 ANKLE1Q8NAG6 615 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 TRPV1Q8NER1 839 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 REPS2Q8NFH8 660 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 INCENPQ9NQS7 918 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 PPP1R9AQ9ULJ8 1098 aa16.19■□□□□ 0.18
CUEDC1-204ENST00000577497 CEP290O15078 2479 aa16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 PLIN4Q96Q06 1357 aa16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 MYH4Q9Y623 1939 aa16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 VWA5AO00534 786 aa16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 CTDSPL2Q05D32 466 aa16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 NECAB2Q7Z6G3 386 aa16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 ZNF444Q8N0Y2 327 aaPredicted RBP16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 LRRC47Q8N1G4 583 aaKnown RBP16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 MTMR4Q9NYA4 1195 aa16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 ZNF214Q9UL59 606 aaPredicted RBP16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 PFASO15067 1338 aa16.18■□□□□ 0.18
CUEDC1-204ENST00000577497 CAPN2P17655 700 aa16.17■□□□□ 0.18
CUEDC1-204ENST00000577497 AAMPQ13685 434 aa16.17■□□□□ 0.18
CUEDC1-204ENST00000577497 MFSD14CQ5VZR4 134 aa16.17■□□□□ 0.18
CUEDC1-204ENST00000577497 DPP9Q86TI2 863 aa16.17■□□□□ 0.18
CUEDC1-204ENST00000577497 ZNF589Q86UQ0 364 aaPredicted RBP16.17■□□□□ 0.18
CUEDC1-204ENST00000577497 RWDD1Q9H446 243 aaPredicted RBP16.17■□□□□ 0.18
CUEDC1-204ENST00000577497 MROH8Q9H579 483 aa16.17■□□□□ 0.18
CUEDC1-204ENST00000577497 PCDH10Q9P2E7 1040 aa16.17■□□□□ 0.18
CUEDC1-204ENST00000577497 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
CUEDC1-204ENST00000577497 STRNO43815 780 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 EVI5O60447 810 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 TSPY3P0CV98 308 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 TSPY8P0CW00 308 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 CYBAP13498 195 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 TFAP4Q01664 338 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 NUCB1Q02818 461 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 PDE4BQ07343 736 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 NMIQ13287 307 aaPredicted RBP16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 RIOX2Q8IUF8 465 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 NEDD1Q8NHV4 660 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 MKL1Q969V6 931 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 SLF1Q9BQI6 1058 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 NBPF3Q9H094 633 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 C11orf49Q9H6J7 331 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 ZNF287Q9HBT7 754 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 HELLSQ9NRZ9 838 aa16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 SUPT16HQ9Y5B9 1047 aaKnown RBP16.16■□□□□ 0.18
CUEDC1-204ENST00000577497 NMT2O60551 498 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 TTLL1O95922 423 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 PGK2P07205 417 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 CNGA1P29973 690 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 STAT3P40763 770 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 OLFML2BQ68BL8 750 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 DNAH12Q6ZR08 3092 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 RASGRP2Q7LDG7 609 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 PLEKHM2Q8IWE5 1019 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 ABRAQ8N0Z2 381 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 CHMP4CQ96CF2 233 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 RBM27Q9P2N5 1060 aaKnown RBP16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 RIPK3Q9Y572 518 aa16.15■□□□□ 0.18
CUEDC1-204ENST00000577497 TRIM6-TRIM34B2RNG4 842 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 SLC25A27O95847 323 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 SLC3A2P08195 630 aaKnown RBP16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 COL6A1P12109 1028 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 FCER1AP12319 257 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 FXR1P51114 621 aaKnown RBP eCLIP16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 MCMDC2Q4G0Z9 681 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 PRAMEF19Q5SWL8 479 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 C7orf61Q8IZ16 206 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 GMCL1P1Q8NEA9 526 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 RILPL2Q969X0 211 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 MAML3Q96JK9 1138 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 MMP19Q99542 508 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 PRO3102Q9H379 93 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 IL17RBQ9NRM6 502 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 DDX20Q9UHI6 824 aaKnown RBP16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 NR2E3Q9Y5X4 410 aa16.14■□□□□ 0.17
CUEDC1-204ENST00000577497 ANO1Q5XXA6 986 aa16.13■□□□□ 0.17
CUEDC1-204ENST00000577497 SNRNP48Q6IEG0 339 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms