RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 CCPG1Q9ULG6 757 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 TRIM68Q6AZZ1 485 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 KRT80Q6KB66 452 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 DCUN1D2Q6PH85 259 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 SGSM3Q96HU1 749 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 PSDA5PKW4 1024 aaPredicted RBP9.7□□□□□ -0.86
CDH8-203ENST00000577390 PUM3Q15397 648 aaKnown RBP9.7□□□□□ -0.86
CDH8-203ENST00000577390 TWISTNBQ3B726 338 aaPredicted RBP9.7□□□□□ -0.86
CDH8-203ENST00000577390 ACSBG1Q96GR2 724 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 TTC25Q96NG3 672 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 IL1RAPL2Q9NP60 686 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 COPRSQ9NQ92 184 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 SCAF11Q99590 1463 aaKnown RBP9.7□□□□□ -0.86
CDH8-203ENST00000577390 ARHGAP6O43182 974 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 ARHGDIAP52565 204 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 DRP2Q13474 957 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 E4F1Q66K89 784 aaPredicted RBP9.7□□□□□ -0.86
CDH8-203ENST00000577390 SULT6B1Q6IMI4 303 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 NEMP1O14524 444 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 SPOPO43791 374 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 GNGT1P63211 74 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 SFSWAPQ12872 951 aaKnown RBP9.7□□□□□ -0.86
CDH8-203ENST00000577390 KLC4Q9NSK0 619 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 RMND1Q9NWS8 449 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 USTQ9Y2C2 406 aa9.7□□□□□ -0.86
CDH8-203ENST00000577390 AQRO60306 1485 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDH8-203ENST00000577390 ETF1P62495 437 aaKnown RBP9.69□□□□□ -0.86
CDH8-203ENST00000577390 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.69□□□□□ -0.86
CDH8-203ENST00000577390 DOLKQ9UPQ8 538 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 ZBBXA8MT70 800 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 GOLGA8KD6RF30 607 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 ARL4DP49703 201 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 ASIC1P78348 528 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDH8-203ENST00000577390 THEMISQ8N1K5 641 aaPredicted RBP9.69□□□□□ -0.86
CDH8-203ENST00000577390 OTULINQ96BN8 352 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 CBX8Q9HC52 389 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 PRDM5Q9NQX1 630 aaPredicted RBP9.69□□□□□ -0.86
CDH8-203ENST00000577390 HSP90AA4PQ58FG1 418 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 AOPEPQ8N6M6 819 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 TRIML1Q8N9V2 468 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 BAIAP2L1Q9UHR4 511 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 DDX39AO00148 427 aaKnown RBP9.69□□□□□ -0.86
CDH8-203ENST00000577390 ATP5DP30049 168 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 GNPTABQ3T906 1256 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 IFT20Q8IY31 132 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 PGBD3Q8N328 593 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 ZBTB10Q96DT7 871 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 PPP1R13BQ96KQ4 1090 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 KRT10P13645 584 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 CCDC85BQ15834 202 aaPredicted RBP9.69□□□□□ -0.86
CDH8-203ENST00000577390 NFE2L2Q16236 605 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 RPS6KC1Q96S38 1066 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 SYNJ2BP-COX16A0A087WUM0 186 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 COX16Q9P0S2 106 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 HIP1RO75146 1068 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 RNF219Q5W0B1 726 aaPredicted RBP9.69□□□□□ -0.86
CDH8-203ENST00000577390 PIDD1Q9HB75 910 aa9.69□□□□□ -0.86
CDH8-203ENST00000577390 KRT81Q14533 505 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 OTUD7BQ6GQQ9 843 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 CEP19Q96LK0 163 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 MYH7BA7E2Y1 1941 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 ENO4A6NNW6 628 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 NUMA1Q14980 2115 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 LIN9Q5TKA1 542 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 CAPZA3Q96KX2 299 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 KRT82Q9NSB4 513 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 TCF3P15923 654 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 B4GALNT2Q8NHY0 566 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 CC2D2AQ9P2K1 1620 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 VAV2P52735 878 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 TEX9Q8N6V9 391 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 MMS19Q96T76 1030 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 MIEF2Q96C03 454 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 HOOK2Q96ED9 719 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 GADD45BO75293 160 aaPredicted RBP9.68□□□□□ -0.86
CDH8-203ENST00000577390 ESRRBO95718 433 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 P4HA1P13674 534 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 GJB2P29033 226 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 IFNA8P32881 189 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 CYLC1P35663 651 aaPredicted RBP9.68□□□□□ -0.86
CDH8-203ENST00000577390 UBASH3AP57075 661 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 CCDC93Q567U6 631 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 P3H4Q92791 437 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 KRT2P35908 639 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 HHATQ5VTY9 493 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 SPATA21Q7Z572 469 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 PARP9Q8IXQ6 854 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 MCUQ8NE86 351 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 PLCB1Q9NQ66 1216 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 NOP53Q9NZM5 478 aaKnown RBP9.68□□□□□ -0.86
CDH8-203ENST00000577390 G3BP2Q9UN86 482 aaKnown RBP9.68□□□□□ -0.86
CDH8-203ENST00000577390 NDUFB5O43674 189 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 ECE1P42892 770 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 DACT1Q9NYF0 836 aa9.68□□□□□ -0.86
CDH8-203ENST00000577390 FGD5Q6ZNL6 1462 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 DNM1Q05193 864 aaKnown RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 CPSF3Q9UKF6 684 aaKnown RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 E9PCH4 1651 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms