RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 PHKA1P46020 1223 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 NAP1L1P55209 391 aaKnown RBP16.32■□□□□ 0.2
SCARF1-209ENST00000576012 WTAPQ15007 396 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 MAGEB6Q8N7X4 407 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 CD248Q9HCU0 757 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 FAM237AA0A1B0GTK4 181 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 BACH1O14867 736 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 TRIM21P19474 475 aaKnown RBP16.31■□□□□ 0.2
SCARF1-209ENST00000576012 HERVK_113P62684 666 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 APBA1Q02410 837 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 TRAPPC11Q7Z392 1133 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 IFT81Q8WYA0 676 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 STRN4Q9NRL3 753 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 ERICH2A1L162 156 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 IPO7O95373 1038 aaKnown RBP16.31■□□□□ 0.2
SCARF1-209ENST00000576012 IFIT5Q13325 482 aaKnown RBP16.31■□□□□ 0.2
SCARF1-209ENST00000576012 CCDC96Q2M329 555 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 CDKAL1Q5VV42 579 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 KANK3Q6NY19 840 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 WDR93Q6P2C0 686 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 KCNV1Q6PIU1 500 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 FAM43BQ6ZT52 329 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-209ENST00000576012 TOM1L2Q6ZVM7 507 aa16.31■□□□□ 0.2
SCARF1-209ENST00000576012 CT47A1Q5JQC4 288 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-209ENST00000576012 NT5DC1Q5TFE4 455 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 CCDC91Q7Z6B0 441 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 CXorf56Q9H5V9 222 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 SLC4A4Q9Y6R1 1079 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 B4DLN1 442 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 CLGNO14967 610 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 NCK2O43639 380 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 ADD2P35612 726 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 PAK1Q13153 545 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 PTPROQ16827 1216 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 CCNI2Q6ZMN8 369 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-209ENST00000576012 TRIML1Q8N9V2 468 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 PLEKP08567 350 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-209ENST00000576012 PDE6AP16499 860 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 GUCY2FP51841 1108 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 GUCY1A3Q02108 690 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 PTGDRQ13258 359 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 ENOX2Q16206 610 aaKnown RBP16.3■□□□□ 0.2
SCARF1-209ENST00000576012 TCP11X2Q5H9J9 407 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 OTUD6BQ8N6M0 293 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 OR8K1Q8NGG5 319 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 MLXIPQ9HAP2 919 aa16.3■□□□□ 0.2
SCARF1-209ENST00000576012 FRMD3A2A2Y4 597 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 CYP27B1O15528 508 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 KIAA0754O94854 1291 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 SEC24CP53992 1094 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 PMS1P54277 932 aaKnown RBP16.29■□□□□ 0.2
SCARF1-209ENST00000576012 ACTN3Q08043 901 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-209ENST00000576012 YY1AP1Q9H869 796 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 ZSCAN5CA6NGD5 496 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-209ENST00000576012 TSEN2Q8NCE0 465 aaKnown RBP16.29■□□□□ 0.2
SCARF1-209ENST00000576012 PROCA1Q8NCQ7 364 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-209ENST00000576012 UBAC1Q9BSL1 405 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 EPB41L4AQ9HCS5 686 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-209ENST00000576012 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 HPDP32754 393 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-209ENST00000576012 PRCPP42785 496 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 IFNL3Q8IZI9 196 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 IFNL2Q8IZJ0 200 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 FBXL16Q8N461 479 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 TMEM87BQ96K49 555 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 CEP131Q9UPN4 1083 aa16.29■□□□□ 0.2
SCARF1-209ENST00000576012 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 IFNAR1P17181 557 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 ATF3P18847 181 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 NFRKBQ6P4R8 1299 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
SCARF1-209ENST00000576012 WASF1Q92558 559 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 SHISA4Q96DD7 197 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 LRWD1Q9UFC0 647 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 ZC3H4Q9UPT8 1303 aaKnown RBP16.28■□□□□ 0.2
SCARF1-209ENST00000576012 PP2D1A8MPX8 630 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 PARP1P09874 1014 aaKnown RBP16.28■□□□□ 0.2
SCARF1-209ENST00000576012 CCDC181Q5TID7 509 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 PIK3AP1Q6ZUJ8 805 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 CEP57Q86XR8 500 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 KIRREL3Q8IZU9 778 aa16.28■□□□□ 0.2
SCARF1-209ENST00000576012 XDHP47989 1333 aa16.27■□□□□ 0.2
SCARF1-209ENST00000576012 CYP2D7A0A087X1C5 515 aa16.27■□□□□ 0.2
SCARF1-209ENST00000576012 TICAM2Q86XR7 235 aa16.27■□□□□ 0.2
SCARF1-209ENST00000576012 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.2
SCARF1-209ENST00000576012 TMEM94Q12767 1356 aa16.27■□□□□ 0.2
SCARF1-209ENST00000576012 NKRFO15226 690 aaKnown RBP eCLIP16.27■□□□□ 0.2
SCARF1-209ENST00000576012 KRT86O43790 486 aa16.27■□□□□ 0.2
SCARF1-209ENST00000576012 MOCS3O95396 460 aa16.27■□□□□ 0.2
SCARF1-209ENST00000576012 PLEKHA8P1O95397 391 aa16.27■□□□□ 0.2
SCARF1-209ENST00000576012 FANCBQ8NB91 859 aa16.27■□□□□ 0.2
SCARF1-209ENST00000576012 GPR108Q9NPR9 543 aa16.27■□□□□ 0.2
SCARF1-209ENST00000576012 DEXIO95424 95 aa16.27■□□□□ 0.19
SCARF1-209ENST00000576012 TUBB2AQ13885 445 aa16.27■□□□□ 0.19
SCARF1-209ENST00000576012 CCDC70Q6NSX1 233 aa16.27■□□□□ 0.19
SCARF1-209ENST00000576012 MS4A14Q96JA4 679 aa16.27■□□□□ 0.19
SCARF1-209ENST00000576012 TUBB2BQ9BVA1 445 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms