RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 FAM83BQ5T0W9 1011 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 CATSPERGQ6ZRH7 1159 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 DCAF4Q8WV16 495 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 TCEANC2Q96MN5 208 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-217ENST00000575711 LY9Q9HBG7 655 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 ZFYVE28Q9HCC9 887 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 WBP1LQ9NX94 342 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
RPAIN-217ENST00000575711 MYH4Q9Y623 1939 aa16.37■□□□□ 0.21
RPAIN-217ENST00000575711 CCDC69A6NI79 296 aa16.37■□□□□ 0.21
RPAIN-217ENST00000575711 CYP2C8P10632 490 aa16.37■□□□□ 0.21
RPAIN-217ENST00000575711 BMP3P12645 472 aa16.37■□□□□ 0.21
RPAIN-217ENST00000575711 RBM25P49756 843 aaKnown RBP16.37■□□□□ 0.21
RPAIN-217ENST00000575711 CCDC96Q2M329 555 aa16.37■□□□□ 0.21
RPAIN-217ENST00000575711 CATIPQ7Z7H3 387 aa16.37■□□□□ 0.21
RPAIN-217ENST00000575711 SMCR8Q8TEV9 937 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-217ENST00000575711 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
RPAIN-217ENST00000575711 IL17RAQ96F46 866 aa16.37■□□□□ 0.21
RPAIN-217ENST00000575711 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
RPAIN-217ENST00000575711 ASCC2Q9H1I8 757 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-217ENST00000575711 GPHNQ9NQX3 736 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-217ENST00000575711 CEP350Q5VT06 3117 aa16.37■□□□□ 0.21
RPAIN-217ENST00000575711 FLOT1O75955 427 aa16.36■□□□□ 0.21
RPAIN-217ENST00000575711 PDHBP11177 359 aa16.36■□□□□ 0.21
RPAIN-217ENST00000575711 CRHR2Q13324 411 aa16.36■□□□□ 0.21
RPAIN-217ENST00000575711 Q6ZUG5 572 aa16.36■□□□□ 0.21
RPAIN-217ENST00000575711 CFHR5Q9BXR6 569 aa16.36■□□□□ 0.21
RPAIN-217ENST00000575711 SENP2Q9HC62 589 aa16.36■□□□□ 0.21
RPAIN-217ENST00000575711 TBC1D8O95759 1140 aa16.35■□□□□ 0.21
RPAIN-217ENST00000575711 SNHG28P0DPA3 235 aa16.35■□□□□ 0.21
RPAIN-217ENST00000575711 IKQ13123 557 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-217ENST00000575711 COG2Q14746 738 aa16.35■□□□□ 0.21
RPAIN-217ENST00000575711 SYNE3Q6ZMZ3 975 aa16.35■□□□□ 0.21
RPAIN-217ENST00000575711 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
RPAIN-217ENST00000575711 RASGRP2Q7LDG7 609 aa16.35■□□□□ 0.21
RPAIN-217ENST00000575711 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
RPAIN-217ENST00000575711 GTF3C2Q8WUA4 911 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-217ENST00000575711 P2RX7Q99572 595 aaKnown RBP16.35■□□□□ 0.21
RPAIN-217ENST00000575711 HOXC10Q9NYD6 342 aa16.35■□□□□ 0.21
RPAIN-217ENST00000575711 FEM1BQ9UK73 627 aa16.35■□□□□ 0.21
RPAIN-217ENST00000575711 SLC12A7Q9Y666 1083 aa16.35■□□□□ 0.21
RPAIN-217ENST00000575711 TMEM232C9JQI7 657 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 TLR2O60603 784 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 DDAH1O94760 285 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 PARP1P09874 1014 aaKnown RBP16.34■□□□□ 0.21
RPAIN-217ENST00000575711 GCLCP48506 637 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-217ENST00000575711 STAT2P52630 851 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 HERVK_113P62684 666 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 ZNF543Q08ER8 600 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 GPATCH4Q5T3I0 446 aaKnown RBP16.34■□□□□ 0.21
RPAIN-217ENST00000575711 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-217ENST00000575711 FAM160B2Q86V87 743 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 FBXL16Q8N461 479 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 CHURC1Q8WUH1 139 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 NUP133Q8WUM0 1156 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 SLF1Q9BQI6 1058 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 FRMPD2Q68DX3 1309 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-217ENST00000575711 MYPNQ86TC9 1320 aa16.34■□□□□ 0.21
RPAIN-217ENST00000575711 HSPA1AP0DMV8 641 aaKnown RBP16.33■□□□□ 0.2
RPAIN-217ENST00000575711 HSPA1BP0DMV9 641 aaKnown RBP16.33■□□□□ 0.2
RPAIN-217ENST00000575711 CALM1P0DP23 149 aa16.33■□□□□ 0.2
RPAIN-217ENST00000575711 CALM2P0DP24 149 aa16.33■□□□□ 0.2
RPAIN-217ENST00000575711 CALM3P0DP25 149 aa16.33■□□□□ 0.2
RPAIN-217ENST00000575711 DSG3P32926 999 aa16.33■□□□□ 0.2
RPAIN-217ENST00000575711 ASPRV1Q53RT3 343 aa16.33■□□□□ 0.2
RPAIN-217ENST00000575711 PRPF38AQ8NAV1 312 aaKnown RBP16.33■□□□□ 0.2
RPAIN-217ENST00000575711 BRF1Q92994 677 aa16.33■□□□□ 0.2
RPAIN-217ENST00000575711 TBC1D32Q96NH3 1257 aa16.33■□□□□ 0.2
RPAIN-217ENST00000575711 GPCPD1Q9NPB8 672 aa16.33■□□□□ 0.2
RPAIN-217ENST00000575711 FBXO28Q9NVF7 368 aa16.33■□□□□ 0.2
RPAIN-217ENST00000575711 PPP1R9AQ9ULJ8 1098 aa16.33■□□□□ 0.2
RPAIN-217ENST00000575711 KLF18A0A0U1RQI7 1052 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 SPDYE16A6NNV3 312 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-217ENST00000575711 PLA2G6O60733 806 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 TROAPQ12815 778 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 GRM4Q14833 912 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 LBX2Q6XYB7 198 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 CTCFLQ8NI51 663 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-217ENST00000575711 KIFC2Q96AC6 838 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 ADGRA2Q96PE1 1338 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 MAP3K14Q99558 947 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 MYL10Q9BUA6 226 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 AGXT2Q9BYV1 514 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 R3HDMLQ9H3Y0 253 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 CPA4Q9UI42 421 aa16.32■□□□□ 0.2
RPAIN-217ENST00000575711 ZBTB43O43298 467 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 GOLGA8HP0CJ92 632 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 KIF5BP33176 963 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 NEK4P51957 841 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 APOBRQ0VD83 1088 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 TTBK2Q6IQ55 1244 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 C17orf99Q6UX52 265 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 MICU3Q86XE3 530 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 ANKRD13CQ8N6S4 541 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 MB21D1Q8N884 522 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms