RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 TERF1P54274 439 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 TPM4P67936 248 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 SMARCE1Q969G3 411 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 FERMT2Q96AC1 680 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 ZNF287Q9HBT7 754 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 HOOK1Q9UJC3 728 aaKnown RBP26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 MORC2Q9Y6X9 1032 aaPredicted RBP26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 KLRF2D3W0D1 207 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 PTPN21Q16825 1174 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 NT5DC1Q5TFE4 455 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 TMC6Q7Z403 805 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 KCNQ5Q9NR82 932 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 FANCLQ9NW38 375 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 PCDHA4Q9UN74 947 aa26.99■■□□□ 1.91
NPLOC4-217ENST00000574897 FMR1Q06787 632 aaKnown RBP eCLIP26.98■■□□□ 1.91
NPLOC4-217ENST00000574897 CLEC10AQ8IUN9 316 aa26.98■■□□□ 1.91
NPLOC4-217ENST00000574897 NT5C2P49902 561 aa26.98■■□□□ 1.91
NPLOC4-217ENST00000574897 GNAQP50148 359 aa26.98■■□□□ 1.91
NPLOC4-217ENST00000574897 STAMQ92783 540 aa26.98■■□□□ 1.91
NPLOC4-217ENST00000574897 BMP15O95972 392 aa26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 CALML3P27482 149 aa26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 CCZ1BP86790 482 aa26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 CCZ1P86791 482 aaPredicted RBP26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 MORC3Q14149 939 aa26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 TRMT44Q8IYL2 757 aaKnown RBP26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 ZNF622Q969S3 477 aaKnown RBP eCLIP26.97■■□□□ 1.912e-10■□□□□ 10.8
NPLOC4-217ENST00000574897 PARP3Q9Y6F1 533 aa26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 M0R2N6 131 aa26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 STXBP3O00186 592 aa26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 SLURP2P0DP57 97 aa26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 SH3GLB2Q9NR46 395 aa26.97■■□□□ 1.91
NPLOC4-217ENST00000574897 HOMER1Q86YM7 354 aa26.96■■□□□ 1.91
NPLOC4-217ENST00000574897 SCN9AQ15858 1988 aa26.96■■□□□ 1.91
NPLOC4-217ENST00000574897 MED15Q96RN5 788 aa26.95■■□□□ 1.91
NPLOC4-217ENST00000574897 DBNDD1Q9H9R9 158 aa26.95■■□□□ 1.91
NPLOC4-217ENST00000574897 PCDHA6Q9UN73 950 aa26.95■■□□□ 1.91
NPLOC4-217ENST00000574897 PCDHA8Q9Y5H6 950 aa26.95■■□□□ 1.91
NPLOC4-217ENST00000574897 SKILP12757 684 aa26.95■■□□□ 1.9
NPLOC4-217ENST00000574897 CDC25AP30304 524 aa26.95■■□□□ 1.9
NPLOC4-217ENST00000574897 EIF6P56537 245 aaKnown RBP26.95■■□□□ 1.9
NPLOC4-217ENST00000574897 PAGE5Q96GU1 130 aa26.95■■□□□ 1.9
NPLOC4-217ENST00000574897 BARHL2Q9NY43 387 aa26.95■■□□□ 1.9
NPLOC4-217ENST00000574897 SLX4Q8IY92 1834 aa26.95■■□□□ 1.9
NPLOC4-217ENST00000574897 SLFN14P0C7P3 912 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 ALDH1B1P30837 517 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 PDE6BP35913 854 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 TRAPPC10P48553 1259 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 SPATA20Q8TB22 786 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 C16orf45Q96MC5 204 aaPredicted RBP26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 VAT1LQ9HCJ6 419 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 ZNF219Q9P2Y4 722 aaPredicted RBP26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 USP27XA6NNY8 438 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 USP17L5A8MUK1 530 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 PARP1P09874 1014 aaKnown RBP26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 KANK3Q6NY19 840 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 SH3RF1Q7Z6J0 888 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 C4orf32Q8N8J7 132 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 MASTLQ96GX5 879 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 OSBPL5Q9H0X9 879 aaPredicted RBP26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 USP40Q9NVE5 1235 aa26.94■■□□□ 1.9
NPLOC4-217ENST00000574897 AKR1B1P15121 316 aa26.93■■□□□ 1.9
NPLOC4-217ENST00000574897 INF2Q27J81 1249 aa26.93■■□□□ 1.9
NPLOC4-217ENST00000574897 UBA5Q9GZZ9 404 aa26.93■■□□□ 1.9
NPLOC4-217ENST00000574897 PCDHAC2Q9Y5I4 1007 aa26.93■■□□□ 1.9
NPLOC4-217ENST00000574897 SERPINC1P01008 464 aa26.93■■□□□ 1.9
NPLOC4-217ENST00000574897 TOP1P11387 765 aaKnown RBP26.93■■□□□ 1.9
NPLOC4-217ENST00000574897 GABPAQ06546 454 aa26.93■■□□□ 1.9
NPLOC4-217ENST00000574897 ARMCX5Q6P1M9 558 aa26.93■■□□□ 1.9
NPLOC4-217ENST00000574897 AEBP2Q6ZN18 517 aaPredicted RBP26.93■■□□□ 1.9
NPLOC4-217ENST00000574897 FRMPD2Q68DX3 1309 aaPredicted RBP26.92■■□□□ 1.9
NPLOC4-217ENST00000574897 TMEM232C9JQI7 657 aa26.92■■□□□ 1.9
NPLOC4-217ENST00000574897 UBASH3AP57075 661 aa26.92■■□□□ 1.9
NPLOC4-217ENST00000574897 LRRC47Q8N1G4 583 aaKnown RBP26.92■■□□□ 1.9
NPLOC4-217ENST00000574897 CCDC194A0A1B0GVG4 234 aa26.92■■□□□ 1.9
NPLOC4-217ENST00000574897 G3V3G9 751 aa26.92■■□□□ 1.9
NPLOC4-217ENST00000574897 DCAF8Q5TAQ9 597 aa26.92■■□□□ 1.9
NPLOC4-217ENST00000574897 SPZ1Q9BXG8 430 aa26.92■■□□□ 1.9
NPLOC4-217ENST00000574897 E2F4Q16254 413 aa26.91■■□□□ 1.9
NPLOC4-217ENST00000574897 CDC42EP5Q6NZY7 148 aa26.91■■□□□ 1.9
NPLOC4-217ENST00000574897 SMYD4Q8IYR2 804 aaPredicted RBP26.91■■□□□ 1.9
NPLOC4-217ENST00000574897 MLKLQ8NB16 471 aa26.91■■□□□ 1.9
NPLOC4-217ENST00000574897 TMEM60Q9H2L4 133 aa26.91■■□□□ 1.9
NPLOC4-217ENST00000574897 NFE2L3Q9Y4A8 694 aa26.91■■□□□ 1.9
NPLOC4-217ENST00000574897 MYH4Q9Y623 1939 aa26.91■■□□□ 1.9
NPLOC4-217ENST00000574897 TNS1Q9HBL0 1735 aaKnown RBP26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 NFIAQ12857 509 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 CFAP100Q494V2 611 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 CCDC148Q8NFR7 591 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 PIGSQ96S52 555 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 BLZF1Q9H2G9 400 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 IMPACTQ9P2X3 320 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 SUGT1Q9Y2Z0 365 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 NEMFO60524 1076 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 CD44P16070 742 aaKnown RBP26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 NAPAP54920 295 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 DPYDQ12882 1025 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 INTS13Q9NVM9 706 aa26.9■■□□□ 1.9
NPLOC4-217ENST00000574897 NOVP48745 357 aa26.89■■□□□ 1.9
NPLOC4-217ENST00000574897 GSDMDP57764 484 aa26.89■■□□□ 1.9
NPLOC4-217ENST00000574897 APOBEC3HQ6NTF7 200 aaKnown RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms