RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 CTR9Q6PD62 1173 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 CERS5Q8N5B7 392 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 CLIC6Q96NY7 704 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 CNNM2Q9H8M5 875 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 DAGLAQ9Y4D2 1042 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 TNKSO95271 1327 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 LAMB4A4D0S4 1761 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 PLCD1P51178 756 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 TBC1D10BQ4KMP7 808 aaPredicted RBP8.55□□□□□ -1.04
RPA1-207ENST00000574049 PRAMEF18Q5VWM3 479 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 RRAGBQ5VZM2 374 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 KIAA1328Q86T90 577 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 RTKN2Q8IZC4 609 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 TTC14Q96N46 770 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 PSMB7Q99436 277 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 CPVLQ9H3G5 476 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 C4BP0C0L5 1744 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 PSMD14O00487 310 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 MYO1BO43795 1136 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 PLCG2P16885 1265 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 PDIA3P30101 505 aaKnown RBP8.55□□□□□ -1.04
RPA1-207ENST00000574049 CCT6AP40227 531 aaKnown RBP8.55□□□□□ -1.04
RPA1-207ENST00000574049 NFIAQ12857 509 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 DIS3L2Q8IYB7 885 aaKnown RBP8.55□□□□□ -1.04
RPA1-207ENST00000574049 CCDC12Q8WUD4 166 aaPredicted RBP8.55□□□□□ -1.04
RPA1-207ENST00000574049 OGFRQ9NZT2 677 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 PKD2L1Q9P0L9 805 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 ZDHHC9Q9Y397 364 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 UBR2Q8IWV8 1755 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 TJP1Q07157 1748 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 RHOXF2BP0C7M4 288 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 TDRD12Q587J7 1177 aaKnown RBP8.54□□□□□ -1.04
RPA1-207ENST00000574049 CNPY4Q8N129 248 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 ZNF384Q8TF68 577 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 RHOXF2Q9BQY4 288 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 RIOK1Q9BRS2 568 aaKnown RBP8.54□□□□□ -1.04
RPA1-207ENST00000574049 PRDM4Q9UKN5 801 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 POLR2DO15514 142 aaKnown RBP8.54□□□□□ -1.04
RPA1-207ENST00000574049 GDF11O95390 407 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 CDC25AP30304 524 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 MTIF2P46199 727 aaKnown RBP8.54□□□□□ -1.04
RPA1-207ENST00000574049 TNNI2P48788 182 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 NKX2-3Q8TAU0 364 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 TSPYL1Q9H0U9 437 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 ZNF445P59923 1031 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 SP4Q02446 784 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 PTPROQ16827 1216 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 LRRC47Q8N1G4 583 aaKnown RBP8.54□□□□□ -1.04
RPA1-207ENST00000574049 CAPZA3Q96KX2 299 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 FHDC1Q9C0D6 1143 aaPredicted RBP8.54□□□□□ -1.04
RPA1-207ENST00000574049 ATP8A2Q9NTI2 1148 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 MROH7-TTC4A0A0A0MT08 1334 aa8.54□□□□□ -1.04
RPA1-207ENST00000574049 BTBD18B2RXH4 712 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 TRIM66O15016 1216 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 RNASE9P60153 205 aaKnown RBP8.53□□□□□ -1.04
RPA1-207ENST00000574049 CCDC70Q6NSX1 233 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 PIK3AP1Q6ZUJ8 805 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 RUFY1Q96T51 708 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 BRWD3Q6RI45 1802 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 NAPAP54920 295 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 ANTXR2P58335 489 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 LETM2Q2VYF4 491 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 KRT40Q6A162 431 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 CIAPIN1Q6FI81 312 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 DESI2Q9BSY9 194 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 ZNF287Q9HBT7 754 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 BMP2KQ9NSY1 1161 aaPredicted RBP8.53□□□□□ -1.04
RPA1-207ENST00000574049 CEP131Q9UPN4 1083 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 THSD7AQ9UPZ6 1657 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 TRIM75PA6NK02 468 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 UBE2Q2LH0YL09 131 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 FOXP2O15409 715 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 CBFA2T2O43439 604 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 ATP2C2O75185 946 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 PEX14O75381 377 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 USP8P40818 1118 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 PLS1Q14651 629 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 SAMD7Q7Z3H4 446 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 PRMT6Q96LA8 375 aaPredicted RBP8.53□□□□□ -1.04
RPA1-207ENST00000574049 TRIM47Q96LD4 638 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 FEZ1Q99689 392 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.53□□□□□ -1.04
RPA1-207ENST00000574049 DACH1Q9UI36 760 aa8.53□□□□□ -1.04
RPA1-207ENST00000574049 CC2D2BQ6DHV5 1058 aa8.52□□□□□ -1.04
RPA1-207ENST00000574049 CDC42EP5Q6NZY7 148 aa8.52□□□□□ -1.04
RPA1-207ENST00000574049 CACNA2D4Q7Z3S7 1137 aa8.52□□□□□ -1.04
RPA1-207ENST00000574049 KSR1Q8IVT5 923 aa8.52□□□□□ -1.04
RPA1-207ENST00000574049 ZNF654Q8IZM8 581 aa8.52□□□□□ -1.04
RPA1-207ENST00000574049 KCNG4Q8TDN1 519 aa8.52□□□□□ -1.04
RPA1-207ENST00000574049 BLZF1Q9H2G9 400 aa8.52□□□□□ -1.04
RPA1-207ENST00000574049 PRM3Q9NNZ6 103 aa8.52□□□□□ -1.04
RPA1-207ENST00000574049 ARPP21Q9UBL0 812 aaPredicted RBP8.52□□□□□ -1.04
RPA1-207ENST00000574049 SAMM50Q9Y512 469 aa8.52□□□□□ -1.04
RPA1-207ENST00000574049 PDE4DIPQ5VU43 2346 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 SHTN1A0MZ66 631 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 TTLL12Q14166 644 aaPredicted RBP8.52□□□□□ -1.05
RPA1-207ENST00000574049 CCDC181Q5TID7 509 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 JAKMIP3Q5VZ66 844 aa8.52□□□□□ -1.05
RPA1-207ENST00000574049 APOA5Q6Q788 366 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms