RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 TRIM8Q9BZR9 551 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 NRSN2Q9GZP1 204 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 KLHL25Q9H0H3 589 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.71□□□□□ -1.98
CHD3-217ENST00000574022 FBRSQ9HAH7 460 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 AVENQ9NQS1 362 aaPredicted RBP2.71□□□□□ -1.98
CHD3-217ENST00000574022 RAD18Q9NS91 495 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 BSDC1Q9NW68 430 aaPredicted RBP2.71□□□□□ -1.98
CHD3-217ENST00000574022 GDF2Q9UK05 429 aaPredicted RBP2.71□□□□□ -1.98
CHD3-217ENST00000574022 TRHDEQ9UKU6 1024 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 PDZRN3Q9UPQ7 1066 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 AKT3Q9Y243 479 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 ZNF451Q9Y4E5 1061 aa2.71□□□□□ -1.98
CHD3-217ENST00000574022 TNKSO95271 1327 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 TCRBV16S1A1N1A0A5B0 115 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 CCDC189A1A4V9 331 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 BLACEA4D250 179 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 B4E1Z4 1266 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 GPR25O00155 361 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 IFRD1O00458 451 aaPredicted RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 AXIN1O15169 862 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 TBX1O43435 398 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 CBFA2T2O43439 604 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 DLX3O60479 287 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 AOC2O75106 756 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 CTSBP07858 339 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 CT47B1P0C2W7 299 aaPredicted RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 U2AF1L5P0DN76 240 aaPredicted RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 BPIP17213 487 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 CD247P20963 164 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 ALAS2P22557 587 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 CCND1P24385 295 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 ADH6P28332 368 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 KCNJ6P48051 423 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 SMCPP49901 116 aaPredicted RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 ERVK-24P63145 666 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 U2AF1Q01081 240 aaKnown RBP eCLIP2.7□□□□□ -1.98
CHD3-217ENST00000574022 ID3Q02535 119 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 DHX8Q14562 1220 aaKnown RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 SART3Q15020 963 aaKnown RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 SUZ12Q15022 739 aaKnown RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 PTPN21Q16825 1174 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 ANKRD39Q53RE8 183 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 PPM1JQ5JR12 505 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 ZBTB37Q5TC79 503 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 PIK3R6Q5UE93 754 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 DCAF15Q66K64 600 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 CXorf57Q6NSI4 855 aaKnown RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 POMZP3Q6PJE2 187 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 C11orf96Q7Z7L8 435 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 DGKHQ86XP1 1220 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 SPNS2Q8IVW8 549 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 TRIM59Q8IWR1 403 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 MRPL41Q8IXM3 137 aaKnown RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 CRACR2BQ8N4Y2 399 aaPredicted RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 ZNF513Q8N8E2 541 aaPredicted RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 KLHL23Q8NBE8 558 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 SVIPQ8NHG7 77 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 BAHD1Q8TBE0 780 aaPredicted RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 COG1Q8WTW3 980 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 NUDT8Q8WV74 236 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 KCTD13Q8WZ19 329 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 KLHDC7BQ96G42 594 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 RCC1LQ96I51 464 aaKnown RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 MRGPRX3Q96LB0 322 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 CCDC140Q96MF4 163 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 ARPC5LQ9BPX5 153 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 USP26Q9BXU7 913 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 MKRN2Q9H000 416 aaKnown RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.7□□□□□ -1.98
CHD3-217ENST00000574022 LUC7LQ9NQ29 371 aaKnown RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 ENAMQ9NRM1 1142 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 LRRC4BQ9NT99 713 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 PLA2G2EQ9NZK7 142 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 WHRNQ9P202 907 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 IP6K2Q9UHH9 426 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 APOBEC2Q9Y235 224 aaKnown RBP2.7□□□□□ -1.98
CHD3-217ENST00000574022 EMC9Q9Y3B6 208 aa2.7□□□□□ -1.98
CHD3-217ENST00000574022 ELOA3CA0A087WX78 387 aaPredicted RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 ELOA3DA6NLF2 546 aaPredicted RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 VSTM5A8MXK1 200 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 PRPF3O43395 683 aaKnown RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 PPFIA4O75335 1185 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 WDHD1O75717 1129 aaPredicted RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 RGS20O76081 388 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 ABLIM3O94929 683 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 SNUPNO95149 360 aaKnown RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 KCNH1O95259 989 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 CRTAMO95727 393 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 APBA3O96018 575 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 IFIT2P09913 472 aaKnown RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 NBPF7P0C2Y1 421 aaPredicted RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 HOXC12P31275 282 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 PDE6BP35913 854 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 BAG6P46379 1132 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 ID4P47928 161 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 NLRP12P59046 1061 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 IL2P60568 153 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 PURAQ00577 322 aaKnown RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 FAPQ12884 760 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms