RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 TRIM32Q13049 653 aa11.94□□□□□ -0.5
RPA1-206ENST00000573994 ZMYM1Q5SVZ6 1142 aa11.94□□□□□ -0.5
RPA1-206ENST00000573994 WDR78Q5VTH9 848 aa11.94□□□□□ -0.5
RPA1-206ENST00000573994 SIAH1Q8IUQ4 282 aa11.94□□□□□ -0.5
RPA1-206ENST00000573994 CCAR1Q8IX12 1150 aaKnown RBP11.94□□□□□ -0.5
RPA1-206ENST00000573994 PXYLP1Q8TE99 480 aa11.94□□□□□ -0.5
RPA1-206ENST00000573994 BTBD7Q9P203 1132 aa11.94□□□□□ -0.5
RPA1-206ENST00000573994 GJD2Q9UKL4 321 aa11.94□□□□□ -0.5
RPA1-206ENST00000573994 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
RPA1-206ENST00000573994 IGHDP01880 384 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 EEF2P13639 858 aaKnown RBP11.93□□□□□ -0.5
RPA1-206ENST00000573994 GNAT2P19087 354 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 RASA1P20936 1047 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 MAPK4P31152 587 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 IRX6P78412 446 aaPredicted RBP11.93□□□□□ -0.5
RPA1-206ENST00000573994 SBK1Q52WX2 424 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 PRPF38BQ5VTL8 546 aaKnown RBP11.93□□□□□ -0.5
RPA1-206ENST00000573994 GIMAP6Q6P9H5 292 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 GPR142Q7Z601 462 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 TRIB2Q92519 343 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 CCDC17Q96LX7 622 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.93□□□□□ -0.5
RPA1-206ENST00000573994 RWDD1Q9H446 243 aaPredicted RBP11.93□□□□□ -0.5
RPA1-206ENST00000573994 SH2D4AQ9H788 454 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 VCPKMTQ9H867 229 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 MKNK2Q9HBH9 465 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 STAP2Q9UGK3 403 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 RABGAP1Q9Y3P9 1069 aa11.93□□□□□ -0.5
RPA1-206ENST00000573994 C2orf72A6NCS6 295 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 FLOT1O75955 427 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 HMGCRP04035 888 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 GJB1P08034 283 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 CAPN2P17655 700 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 PLEKHH3Q7Z736 793 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 IFNL3Q8IZI9 196 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 U2AF1L4Q8WU68 220 aaKnown RBP11.92□□□□□ -0.5
RPA1-206ENST00000573994 SOCS4Q8WXH5 440 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 EVI5LQ96CN4 794 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 NUDT12Q9BQG2 462 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 NAPBQ9H115 298 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 TMX2Q9Y320 296 aa11.92□□□□□ -0.5
RPA1-206ENST00000573994 A0A0D9SFI3 127 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
RPA1-206ENST00000573994 FOXP2O15409 715 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 ZKSCAN1P17029 563 aaPredicted RBP11.91□□□□□ -0.5
RPA1-206ENST00000573994 GJA8P48165 433 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 CCNA1P78396 465 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 CCL14Q16627 93 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 MORN1Q5T089 497 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 VPS53Q5VIR6 699 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 GPR153Q6NV75 609 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 LBX2Q6XYB7 198 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 TICAM2Q86XR7 235 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 LPAR1Q92633 364 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 DEFB118Q96PH6 123 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 APBA2Q99767 749 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 NACAP1Q9BZK3 213 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.91□□□□□ -0.5
RPA1-206ENST00000573994 KANSL2Q9H9L4 492 aa11.91□□□□□ -0.5
RPA1-206ENST00000573994 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
RPA1-206ENST00000573994 WDR46O15213 610 aaKnown RBP11.9□□□□□ -0.5
RPA1-206ENST00000573994 FARP2O94887 1054 aaPredicted RBP11.9□□□□□ -0.5
RPA1-206ENST00000573994 RGS2P41220 211 aa11.9□□□□□ -0.5
RPA1-206ENST00000573994 PLS1Q14651 629 aa11.9□□□□□ -0.5
RPA1-206ENST00000573994 COG2Q14746 738 aa11.9□□□□□ -0.5
RPA1-206ENST00000573994 FAM83BQ5T0W9 1011 aa11.9□□□□□ -0.5
RPA1-206ENST00000573994 CHD1LQ86WJ1 897 aa11.9□□□□□ -0.5
RPA1-206ENST00000573994 NKX2-3Q8TAU0 364 aa11.9□□□□□ -0.5
RPA1-206ENST00000573994 NUP88Q99567 741 aaPredicted RBP11.9□□□□□ -0.5
RPA1-206ENST00000573994 PAK6Q9NQU5 681 aaPredicted RBP11.9□□□□□ -0.5
RPA1-206ENST00000573994 FBXO28Q9NVF7 368 aa11.9□□□□□ -0.5
RPA1-206ENST00000573994 PLXNB2O15031 1838 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 NUCB1Q02818 461 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 PPARAQ07869 468 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 NMIQ13287 307 aaPredicted RBP11.89□□□□□ -0.51
RPA1-206ENST00000573994 FAM47AQ5JRC9 791 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 VARS2Q5ST30 1063 aaKnown RBP11.89□□□□□ -0.51
RPA1-206ENST00000573994 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 LRRC47Q8N1G4 583 aaKnown RBP11.89□□□□□ -0.51
RPA1-206ENST00000573994 USP6NLQ92738 828 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 RILPL2Q969X0 211 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 CEP95Q96GE4 821 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 MOV10L1Q9BXT6 1211 aaKnown RBP11.89□□□□□ -0.51
RPA1-206ENST00000573994 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 GOPCQ9HD26 462 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 MYH8P13535 1937 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
RPA1-206ENST00000573994 IGKV6D-41A0A0C4DH26 115 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 SLC15A5A6NIM6 579 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 SGPL1O95470 568 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 NDUFB10O96000 172 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 TFRCP02786 760 aaKnown RBP11.88□□□□□ -0.51
RPA1-206ENST00000573994 ERCC3P19447 782 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 PTPREP23469 700 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 CTDSPL2Q05D32 466 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 MAP2K5Q13163 448 aa11.88□□□□□ -0.51
RPA1-206ENST00000573994 UBE2Q1Q7Z7E8 422 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms