RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 A0A0C4DFX4 3053 aa26.44■■□□□ 1.82
SNF8-216ENST00000573795 GJC2Q5T442 439 aaPredicted RBP26.44■■□□□ 1.82
SNF8-216ENST00000573795 MAML3Q96JK9 1138 aa26.44■■□□□ 1.82
SNF8-216ENST00000573795 SEPT4O43236 478 aa26.43■■□□□ 1.82
SNF8-216ENST00000573795 PRAMEF19Q5SWL8 479 aa26.43■■□□□ 1.82
SNF8-216ENST00000573795 AMOTL1Q8IY63 956 aa26.43■■□□□ 1.82
SNF8-216ENST00000573795 DEFB123Q8N688 67 aa26.43■■□□□ 1.82
SNF8-216ENST00000573795 KANSL2Q9H9L4 492 aa26.43■■□□□ 1.82
SNF8-216ENST00000573795 RTP1P59025 263 aa26.42■■□□□ 1.82
SNF8-216ENST00000573795 ZSCAN25Q6NSZ9 544 aa26.42■■□□□ 1.82
SNF8-216ENST00000573795 SAMD1Q6SPF0 538 aaPredicted RBP26.42■■□□□ 1.82
SNF8-216ENST00000573795 STRBPQ96SI9 672 aaKnown RBP26.42■■□□□ 1.82
SNF8-216ENST00000573795 SMCHD1A6NHR9 2005 aa26.41■■□□□ 1.82
SNF8-216ENST00000573795 REPS2Q8NFH8 660 aa26.41■■□□□ 1.82
SNF8-216ENST00000573795 DDRGK1Q96HY6 314 aa26.41■■□□□ 1.82
SNF8-216ENST00000573795 ARPP21Q9UBL0 812 aaPredicted RBP26.41■■□□□ 1.82
SNF8-216ENST00000573795 SLC25A27O95847 323 aa26.4■■□□□ 1.82
SNF8-216ENST00000573795 FCER1AP12319 257 aa26.4■■□□□ 1.82
SNF8-216ENST00000573795 ARRDC4Q8NCT1 418 aa26.4■■□□□ 1.82
SNF8-216ENST00000573795 ECHDC1Q9NTX5 307 aa26.4■■□□□ 1.82
SNF8-216ENST00000573795 SLC5A4Q9NY91 659 aa26.4■■□□□ 1.82
SNF8-216ENST00000573795 ZNF214Q9UL59 606 aaPredicted RBP26.4■■□□□ 1.82
SNF8-216ENST00000573795 PPP1R9AQ9ULJ8 1098 aa26.4■■□□□ 1.82
SNF8-216ENST00000573795 ROBO3Q96MS0 1386 aa26.39■■□□□ 1.82
SNF8-216ENST00000573795 GSG1L2A8MUP6 293 aa26.39■■□□□ 1.82
SNF8-216ENST00000573795 SBK1Q52WX2 424 aa26.39■■□□□ 1.82
SNF8-216ENST00000573795 FAM83BQ5T0W9 1011 aa26.39■■□□□ 1.82
SNF8-216ENST00000573795 RIOX2Q8IUF8 465 aa26.39■■□□□ 1.82
SNF8-216ENST00000573795 SLC17A8Q8NDX2 589 aa26.39■■□□□ 1.82
SNF8-216ENST00000573795 MTMR10Q9NXD2 777 aa26.39■■□□□ 1.82
SNF8-216ENST00000573795 VWA5AO00534 786 aa26.38■■□□□ 1.81
SNF8-216ENST00000573795 RASA1P20936 1047 aa26.38■■□□□ 1.81
SNF8-216ENST00000573795 SNX17Q15036 470 aa26.38■■□□□ 1.81
SNF8-216ENST00000573795 FAM47AQ5JRC9 791 aa26.38■■□□□ 1.81
SNF8-216ENST00000573795 TSHZ3Q63HK5 1081 aa26.38■■□□□ 1.81
SNF8-216ENST00000573795 SLC39A5Q6ZMH5 540 aa26.38■■□□□ 1.81
SNF8-216ENST00000573795 KBTBD3Q8NAB2 608 aa26.38■■□□□ 1.81
SNF8-216ENST00000573795 OSBP2Q969R2 916 aa26.38■■□□□ 1.81
SNF8-216ENST00000573795 GOPCQ9HD26 462 aa26.38■■□□□ 1.81
SNF8-216ENST00000573795 KBTBD13C9JR72 458 aa26.37■■□□□ 1.81
SNF8-216ENST00000573795 PGK2P07205 417 aa26.37■■□□□ 1.81
SNF8-216ENST00000573795 LRRC41Q15345 812 aa26.37■■□□□ 1.81
SNF8-216ENST00000573795 MMP19Q99542 508 aa26.37■■□□□ 1.81
SNF8-216ENST00000573795 EPB41L4AQ9HCS5 686 aaPredicted RBP26.37■■□□□ 1.81
SNF8-216ENST00000573795 ATP11BQ9Y2G3 1177 aa26.37■■□□□ 1.81
SNF8-216ENST00000573795 MYH4Q9Y623 1939 aa26.37■■□□□ 1.81
SNF8-216ENST00000573795 ZNF792Q3KQV3 632 aa26.36■■□□□ 1.81
SNF8-216ENST00000573795 NUP88Q99567 741 aaPredicted RBP26.36■■□□□ 1.81
SNF8-216ENST00000573795 DCTPP1Q9H773 170 aa26.36■■□□□ 1.81
SNF8-216ENST00000573795 STAT3P40763 770 aa26.35■■□□□ 1.81
SNF8-216ENST00000573795 TRIM60Q495X7 471 aa26.35■■□□□ 1.81
SNF8-216ENST00000573795 GIMAP6Q6P9H5 292 aa26.35■■□□□ 1.81
SNF8-216ENST00000573795 STK11IPQ8N1F8 1099 aa26.35■■□□□ 1.81
SNF8-216ENST00000573795 APPBP2Q92624 585 aa26.35■■□□□ 1.81
SNF8-216ENST00000573795 LBHD1Q9BQE6 289 aaPredicted RBP26.35■■□□□ 1.81
SNF8-216ENST00000573795 UNC80Q8N2C7 3258 aa26.35■■□□□ 1.81
SNF8-216ENST00000573795 TAL1P17542 331 aaPredicted RBP26.34■■□□□ 1.81
SNF8-216ENST00000573795 ADCYAP1R1P41586 468 aa26.34■■□□□ 1.81
SNF8-216ENST00000573795 TINF2Q9BSI4 451 aa26.34■■□□□ 1.81
SNF8-216ENST00000573795 NRBP1Q9UHY1 535 aa26.34■■□□□ 1.81
SNF8-216ENST00000573795 STXBP5LQ9Y2K9 1186 aa26.34■■□□□ 1.81
SNF8-216ENST00000573795 IGKV6D-41A0A0C4DH26 115 aa26.33■■□□□ 1.81
SNF8-216ENST00000573795 RAD21O60216 631 aa26.33■■□□□ 1.81
SNF8-216ENST00000573795 MYCNP04198 464 aaPredicted RBP26.33■■□□□ 1.81
SNF8-216ENST00000573795 FERMT2Q96AC1 680 aa26.33■■□□□ 1.81
SNF8-216ENST00000573795 NYAP2Q9P242 653 aa26.33■■□□□ 1.81
SNF8-216ENST00000573795 DIS3Q9Y2L1 958 aaKnown RBP26.33■■□□□ 1.81
SNF8-216ENST00000573795 MINDY4BA8MYZ0 360 aa26.32■■□□□ 1.8
SNF8-216ENST00000573795 POTEB2H3BUK9 544 aa26.32■■□□□ 1.8
SNF8-216ENST00000573795 M0R2C6 588 aa26.32■■□□□ 1.8
SNF8-216ENST00000573795 RNF113AO15541 343 aaKnown RBP26.32■■□□□ 1.8
SNF8-216ENST00000573795 GPAA1O43292 621 aa26.32■■□□□ 1.8
SNF8-216ENST00000573795 NDUFB10O96000 172 aa26.32■■□□□ 1.8
SNF8-216ENST00000573795 KCTD2Q14681 263 aa26.32■■□□□ 1.8
SNF8-216ENST00000573795 SLF1Q9BQI6 1058 aa26.32■■□□□ 1.8
SNF8-216ENST00000573795 PDLIM7Q9NR12 457 aa26.32■■□□□ 1.8
SNF8-216ENST00000573795 F5H6K3 240 aa26.31■■□□□ 1.8
SNF8-216ENST00000573795 ZNF865P0CJ78 1059 aaPredicted RBP26.31■■□□□ 1.8
SNF8-216ENST00000573795 KLRC3Q07444 240 aa26.31■■□□□ 1.8
SNF8-216ENST00000573795 C1orf53Q5VUE5 145 aa26.31■■□□□ 1.8
SNF8-216ENST00000573795 SH3RF1Q7Z6J0 888 aa26.31■■□□□ 1.8
SNF8-216ENST00000573795 MKNK2Q9HBH9 465 aa26.31■■□□□ 1.8
SNF8-216ENST00000573795 XPNPEP3Q9NQH7 507 aa26.31■■□□□ 1.8
SNF8-216ENST00000573795 PRKAG2Q9UGJ0 569 aa26.31■■□□□ 1.8
SNF8-216ENST00000573795 PHF24Q9UPV7 400 aa26.31■■□□□ 1.8
SNF8-216ENST00000573795 COPB2P35606 906 aa26.3■■□□□ 1.8
SNF8-216ENST00000573795 LENG1Q96BZ8 264 aaPredicted RBP26.3■■□□□ 1.8
SNF8-216ENST00000573795 RIPK3Q9Y572 518 aa26.3■■□□□ 1.8
SNF8-216ENST00000573795 TRIM43BA6NCK2 446 aa26.29■■□□□ 1.8
SNF8-216ENST00000573795 PGK1P00558 417 aa26.29■■□□□ 1.8
SNF8-216ENST00000573795 RARBP10826 455 aa26.29■■□□□ 1.8
SNF8-216ENST00000573795 TRIM43Q96BQ3 446 aaPredicted RBP26.29■■□□□ 1.8
SNF8-216ENST00000573795 TEX13BQ9BXU2 312 aa26.29■■□□□ 1.8
SNF8-216ENST00000573795 PRDM5Q9NQX1 630 aaPredicted RBP26.29■■□□□ 1.8
SNF8-216ENST00000573795 EYSQ5T1H1 3165 aa26.29■■□□□ 1.8
SNF8-216ENST00000573795 DLL1O00548 723 aa26.28■■□□□ 1.8
SNF8-216ENST00000573795 PRDM1O75626 825 aa26.28■■□□□ 1.8
SNF8-216ENST00000573795 C9orf50Q5SZB4 431 aa26.28■■□□□ 1.8
SNF8-216ENST00000573795 FAM109BQ6ICB4 259 aaPredicted RBP26.28■■□□□ 1.8
SNF8-216ENST00000573795 SNRNP48Q6IEG0 339 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms