RNA–Protein interactions for RNA: ENST00000573236.5

PAM16-206, Transcript of presequence translocase associated motor 16, humanhuman

TSL 1 (best)

Gene PAM16, Length 704 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-206ENST00000573236 MOV10L1Q9BXT6 1211 aaKnown RBP18.39■□□□□ 0.53
PAM16-206ENST00000573236 RNF208Q9H0X6 261 aa18.39■□□□□ 0.53
PAM16-206ENST00000573236 CWC22Q9HCG8 908 aaKnown RBP18.39■□□□□ 0.53
PAM16-206ENST00000573236 ZMYM6O95789 1325 aa18.39■□□□□ 0.53
PAM16-206ENST00000573236 ORC4O43929 436 aa18.38■□□□□ 0.53
PAM16-206ENST00000573236 FGRP09769 529 aa18.38■□□□□ 0.53
PAM16-206ENST00000573236 MFAP1P55081 439 aaKnown RBP18.38■□□□□ 0.53
PAM16-206ENST00000573236 TRIM32Q13049 653 aa18.38■□□□□ 0.53
PAM16-206ENST00000573236 MB21D1Q8N884 522 aa18.38■□□□□ 0.53
PAM16-206ENST00000573236 TRIB2Q92519 343 aa18.38■□□□□ 0.53
PAM16-206ENST00000573236 NBPF3Q9H094 633 aa18.38■□□□□ 0.53
PAM16-206ENST00000573236 SPATC1LQ9H0A9 340 aa18.38■□□□□ 0.53
PAM16-206ENST00000573236 IL17RBQ9NRM6 502 aa18.38■□□□□ 0.53
PAM16-206ENST00000573236 COL11A1P12107 1806 aaPredicted RBP18.37■□□□□ 0.53
PAM16-206ENST00000573236 TSPY2A6NKD2 308 aa18.37■□□□□ 0.53
PAM16-206ENST00000573236 RANBP6O60518 1105 aaKnown RBP18.37■□□□□ 0.53
PAM16-206ENST00000573236 NMT2O60551 498 aa18.37■□□□□ 0.53
PAM16-206ENST00000573236 HMGCRP04035 888 aa18.37■□□□□ 0.53
PAM16-206ENST00000573236 PTPREP23469 700 aa18.37■□□□□ 0.53
PAM16-206ENST00000573236 RGS2P41220 211 aa18.37■□□□□ 0.53
PAM16-206ENST00000573236 PLS1Q14651 629 aa18.37■□□□□ 0.53
PAM16-206ENST00000573236 SHISA4Q96DD7 197 aa18.37■□□□□ 0.53
PAM16-206ENST00000573236 IL25Q9H293 177 aa18.37■□□□□ 0.53
PAM16-206ENST00000573236 PPP1R9AQ9ULJ8 1098 aa18.37■□□□□ 0.53
PAM16-206ENST00000573236 ADAMTS5Q9UNA0 930 aa18.37■□□□□ 0.53
PAM16-206ENST00000573236 GJB1P08034 283 aa18.36■□□□□ 0.53
PAM16-206ENST00000573236 XRCC5P13010 732 aaKnown RBP18.36■□□□□ 0.53
PAM16-206ENST00000573236 ERCC3P19447 782 aa18.36■□□□□ 0.53
PAM16-206ENST00000573236 MAP2K5Q13163 448 aa18.36■□□□□ 0.53
PAM16-206ENST00000573236 TMEM132BQ14DG7 1078 aa18.36■□□□□ 0.53
PAM16-206ENST00000573236 CCL14Q16627 93 aa18.36■□□□□ 0.53
PAM16-206ENST00000573236 RRP12Q5JTH9 1297 aaKnown RBP18.36■□□□□ 0.53
PAM16-206ENST00000573236 TOMM22Q9NS69 142 aa18.36■□□□□ 0.53
PAM16-206ENST00000573236 SLC15A5A6NIM6 579 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 GJA8P48165 433 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 GRB14Q14449 540 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 SLFN13Q68D06 897 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 TBC1D10CQ8IV04 446 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 GMCL1P1Q8NEA9 526 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 SHCBP1Q8NEM2 672 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 REPS2Q8NFH8 660 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 NKX2-3Q8TAU0 364 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 SLF1Q9BQI6 1058 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 SYNPO2Q9UMS6 1093 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 STX8Q9UNK0 236 aa18.35■□□□□ 0.53
PAM16-206ENST00000573236 VWA5AO00534 786 aa18.34■□□□□ 0.53
PAM16-206ENST00000573236 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
PAM16-206ENST00000573236 NCAPG2Q86XI2 1143 aa18.34■□□□□ 0.53
PAM16-206ENST00000573236 U2AF1L4Q8WU68 220 aaKnown RBP18.34■□□□□ 0.53
PAM16-206ENST00000573236 STAG1Q8WVM7 1258 aa18.34■□□□□ 0.53
PAM16-206ENST00000573236 CHMP4CQ96CF2 233 aa18.34■□□□□ 0.53
PAM16-206ENST00000573236 APBA2Q99767 749 aa18.34■□□□□ 0.53
PAM16-206ENST00000573236 PAK6Q9NQU5 681 aaPredicted RBP18.34■□□□□ 0.53
PAM16-206ENST00000573236 IVNS1ABPQ9Y6Y0 642 aa18.34■□□□□ 0.53
PAM16-206ENST00000573236 LAMA4Q16363 1823 aa18.33■□□□□ 0.53
PAM16-206ENST00000573236 AKNAD1Q5T1N1 836 aa18.33■□□□□ 0.52
PAM16-206ENST00000573236 DEFB118Q96PH6 123 aa18.33■□□□□ 0.52
PAM16-206ENST00000573236 DSCC1Q9BVC3 393 aa18.33■□□□□ 0.52
PAM16-206ENST00000573236 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.33■□□□□ 0.521e-5■■■■□ 21.4
PAM16-206ENST00000573236 ZNF214Q9UL59 606 aaPredicted RBP18.33■□□□□ 0.52
PAM16-206ENST00000573236 ZNF213O14771 459 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 SGPL1O95470 568 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 BMP3P12645 472 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 CHMLP26374 656 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 ADORA2AP29274 412 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 NOVP48745 357 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 PPP4R3BQ5MIZ7 849 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 MAP3K21Q5TCX8 1036 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 MFSD6Q6ZSS7 791 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 RASGRP2Q7LDG7 609 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 TRMT44Q8IYL2 757 aaKnown RBP18.32■□□□□ 0.52
PAM16-206ENST00000573236 NPLOC4Q8TAT6 608 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 KIFC2Q96AC6 838 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 MROH8Q9H579 483 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 FLRT1Q9NZU1 646 aa18.32■□□□□ 0.52
PAM16-206ENST00000573236 NEDD4P46934 1319 aa18.31■□□□□ 0.52
PAM16-206ENST00000573236 RPTORQ8N122 1335 aa18.31■□□□□ 0.52
PAM16-206ENST00000573236 HOXC6P09630 235 aa18.31■□□□□ 0.52
PAM16-206ENST00000573236 PRKAR2AP13861 404 aaKnown RBP18.31■□□□□ 0.52
PAM16-206ENST00000573236 MCCP23508 829 aa18.31■□□□□ 0.52
PAM16-206ENST00000573236 STAT3P40763 770 aa18.31■□□□□ 0.52
PAM16-206ENST00000573236 CACNB2Q08289 660 aaPredicted RBP18.31■□□□□ 0.52
PAM16-206ENST00000573236 RIOX2Q8IUF8 465 aa18.31■□□□□ 0.52
PAM16-206ENST00000573236 PRPF38AQ8NAV1 312 aaKnown RBP18.31■□□□□ 0.52
PAM16-206ENST00000573236 HMX1Q9NP08 348 aaPredicted RBP18.31■□□□□ 0.52
PAM16-206ENST00000573236 FEM1BQ9UK73 627 aa18.31■□□□□ 0.52
PAM16-206ENST00000573236 ZNFX1Q9P2E3 1918 aaKnown RBP18.31■□□□□ 0.52
PAM16-206ENST00000573236 ZNF236Q9UL36 1845 aa18.3■□□□□ 0.52
PAM16-206ENST00000573236 TMEM232C9JQI7 657 aa18.3■□□□□ 0.52
PAM16-206ENST00000573236 STRNO43815 780 aa18.3■□□□□ 0.52
PAM16-206ENST00000573236 COBLO75128 1261 aa18.3■□□□□ 0.52
PAM16-206ENST00000573236 SLC25A27O95847 323 aa18.3■□□□□ 0.52
PAM16-206ENST00000573236 PCP11498 1178 aaKnown RBP18.3■□□□□ 0.52
PAM16-206ENST00000573236 SLC1A4P43007 532 aa18.3■□□□□ 0.52
PAM16-206ENST00000573236 CENPQQ7L2Z9 268 aaPredicted RBP18.3■□□□□ 0.52
PAM16-206ENST00000573236 DPP9Q86TI2 863 aa18.3■□□□□ 0.52
PAM16-206ENST00000573236 GMCL1Q96IK5 515 aa18.3■□□□□ 0.52
PAM16-206ENST00000573236 RNF41Q9H4P4 317 aaPredicted RBP18.3■□□□□ 0.52
PAM16-206ENST00000573236 TCP11L1Q9NUJ3 509 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms